RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C YDR157WA0A023PZE8 133 aa6.28□□□□□ -1.4
LSP1YPL004C YBL071CP38185 102 aa6.28□□□□□ -1.4
LSP1YPL004C CSH1P38287 376 aa6.28□□□□□ -1.4
LSP1YPL004C MIC12P38341 106 aa6.28□□□□□ -1.4
LSP1YPL004C TAD2P47058 250 aa6.28□□□□□ -1.4
LSP1YPL004C CAB4P53332 305 aa6.28□□□□□ -1.4
LSP1YPL004C ANT1Q06497 328 aa6.28□□□□□ -1.4
LSP1YPL004C USV1Q12132 391 aa6.28□□□□□ -1.4
LSP1YPL004C YLR125WQ12138 136 aa6.28□□□□□ -1.4
LSP1YPL004C POC4Q12245 148 aaPredicted RBP6.28□□□□□ -1.4
LSP1YPL004C PRR2Q12310 699 aa6.28□□□□□ -1.4
LSP1YPL004C SRL3P36167 246 aa6.27□□□□□ -1.41
LSP1YPL004C GLY1P37303 387 aaKnown RBP6.27□□□□□ -1.41
LSP1YPL004C CDS1P38221 457 aa6.27□□□□□ -1.41
LSP1YPL004C QDR3P38227 689 aa6.27□□□□□ -1.41
LSP1YPL004C YEA4P40004 342 aa6.27□□□□□ -1.41
LSP1YPL004C ECM27P47144 725 aa6.27□□□□□ -1.41
LSP1YPL004C YAP1802P53309 568 aa6.27□□□□□ -1.41
LSP1YPL004C CPD1P53314 239 aa6.27□□□□□ -1.41
LSP1YPL004C SWT21P53873 357 aaPredicted RBP6.27□□□□□ -1.41
LSP1YPL004C MET32Q12041 191 aa6.27□□□□□ -1.41
LSP1YPL004C AGC1Q12482 902 aa6.27□□□□□ -1.41
LSP1YPL004C YGL194C-AQ2V2P6 80 aa6.27□□□□□ -1.41
LSP1YPL004C PET494P07390 489 aaPredicted RBP6.26□□□□□ -1.41
LSP1YPL004C RPS25BP0C0T4 108 aaKnown RBP6.26□□□□□ -1.41
LSP1YPL004C MAG1P22134 296 aaKnown RBP6.26□□□□□ -1.41
LSP1YPL004C UPS2P35200 230 aa6.26□□□□□ -1.41
LSP1YPL004C BDH1P39714 382 aa6.26□□□□□ -1.41
LSP1YPL004C YGR269WP40326 108 aa6.26□□□□□ -1.41
LSP1YPL004C YGL117WP53133 265 aa6.26□□□□□ -1.41
LSP1YPL004C YGR018CP53211 109 aa6.26□□□□□ -1.41
LSP1YPL004C VPS71Q03433 280 aa6.26□□□□□ -1.41
LSP1YPL004C RXT3Q07458 294 aa6.26□□□□□ -1.41
LSP1YPL004C YOR352WQ08816 343 aa6.26□□□□□ -1.41
LSP1YPL004C PAA1Q12447 191 aaKnown RBP6.26□□□□□ -1.41
LSP1YPL004C RPS25AQ3E792 108 aaPredicted RBP6.26□□□□□ -1.41
LSP1YPL004C TDH1P00360 332 aaKnown RBP6.25□□□□□ -1.41
LSP1YPL004C CYC3P06182 269 aa6.25□□□□□ -1.41
LSP1YPL004C PIS1P06197 220 aaKnown RBP6.25□□□□□ -1.41
LSP1YPL004C YCR022CP25620 114 aa6.25□□□□□ -1.41
LSP1YPL004C UTR5P32630 166 aa6.25□□□□□ -1.41
LSP1YPL004C YBR144CP34215 104 aa6.25□□□□□ -1.41
LSP1YPL004C YLR179CQ06252 201 aaKnown RBP6.25□□□□□ -1.41
LSP1YPL004C BER1Q06688 274 aaKnown RBP6.25□□□□□ -1.41
LSP1YPL004C POS5Q06892 414 aa6.25□□□□□ -1.41
LSP1YPL004C MIG1P27705 504 aa6.24□□□□□ -1.41
LSP1YPL004C SIP1P32578 815 aa6.24□□□□□ -1.41
LSP1YPL004C AVT5P38176 459 aa6.24□□□□□ -1.41
LSP1YPL004C RRT1P38192 103 aa6.24□□□□□ -1.41
LSP1YPL004C ASP1P38986 381 aaPredicted RBP6.24□□□□□ -1.41
LSP1YPL004C SYG1P40528 902 aa6.24□□□□□ -1.41
LSP1YPL004C YJR015WP47090 510 aa6.24□□□□□ -1.41
LSP1YPL004C MRPL50P53724 139 aa6.24□□□□□ -1.41
LSP1YPL004C YMR181CQ03231 154 aa6.24□□□□□ -1.41
LSP1YPL004C FCF2Q12035 217 aaPredicted RBP6.24□□□□□ -1.41
LSP1YPL004C POM34Q12445 299 aa6.24□□□□□ -1.41
LSP1YPL004C EMP24P32803 203 aaKnown RBP6.23□□□□□ -1.41
LSP1YPL004C GCV3P39726 170 aaPredicted RBP6.23□□□□□ -1.41
LSP1YPL004C SRB7P47822 140 aa6.23□□□□□ -1.41
LSP1YPL004C COX18P53239 316 aa6.23□□□□□ -1.41
LSP1YPL004C NCE103P53615 221 aa6.23□□□□□ -1.41
LSP1YPL004C BOR1P53838 576 aa6.23□□□□□ -1.41
LSP1YPL004C POP5P28005 173 aa6.22□□□□□ -1.41
LSP1YPL004C POR2P40478 281 aa6.22□□□□□ -1.41
LSP1YPL004C ORM1P53224 222 aa6.22□□□□□ -1.41
LSP1YPL004C LST7P53237 242 aa6.22□□□□□ -1.41
LSP1YPL004C TIM18Q08749 192 aa6.22□□□□□ -1.41
LSP1YPL004C ALK2P32789 676 aaPredicted RBP6.21□□□□□ -1.42
LSP1YPL004C IMD2P38697 523 aaKnown RBP6.21□□□□□ -1.42
LSP1YPL004C PEX7P39108 375 aa6.21□□□□□ -1.42
LSP1YPL004C BUL1P48524 976 aa6.21□□□□□ -1.42
LSP1YPL004C MIC27P50945 234 aa6.21□□□□□ -1.42
LSP1YPL004C YNR066CP53752 436 aa6.21□□□□□ -1.42
LSP1YPL004C TDA6Q06466 467 aa6.21□□□□□ -1.42
LSP1YPL004C ARR3Q06598 404 aa6.21□□□□□ -1.42
LSP1YPL004C YDL242WQ07746 117 aa6.21□□□□□ -1.42
LSP1YPL004C YMR316C-AI2HB70 103 aa6.2□□□□□ -1.42
LSP1YPL004C UBI4P0CG63 381 aaKnown RBP6.2□□□□□ -1.42
LSP1YPL004C MRPL49P40858 161 aaPredicted RBP6.2□□□□□ -1.42
LSP1YPL004C RTS2P40962 232 aa6.2□□□□□ -1.42
LSP1YPL004C SAS2P40963 338 aa6.2□□□□□ -1.42
LSP1YPL004C YPI1P43587 155 aa6.2□□□□□ -1.42
LSP1YPL004C YJL027CP47063 138 aaPredicted RBP6.2□□□□□ -1.42
LSP1YPL004C PLP1Q04004 230 aa6.2□□□□□ -1.42
LSP1YPL004C LRS4Q04087 347 aaKnown RBP6.2□□□□□ -1.42
LSP1YPL004C SDH7Q04401 133 aa6.2□□□□□ -1.42
LSP1YPL004C SHH3Q04487 196 aa6.2□□□□□ -1.42
LSP1YPL004C CDC7P06243 507 aa6.19□□□□□ -1.42
LSP1YPL004C YHR213WP0CI67 198 aa6.19□□□□□ -1.42
LSP1YPL004C QCR9P22289 66 aa6.19□□□□□ -1.42
LSP1YPL004C ELO2P25358 347 aa6.19□□□□□ -1.42
LSP1YPL004C AHT1P29589 182 aa6.19□□□□□ -1.42
LSP1YPL004C YBL059WP34224 193 aa6.19□□□□□ -1.42
LSP1YPL004C SHB17P36136 271 aaKnown RBP6.19□□□□□ -1.42
LSP1YPL004C JAC1P53193 184 aa6.19□□□□□ -1.42
LSP1YPL004C MRPS17Q03246 237 aaPredicted RBP6.19□□□□□ -1.42
LSP1YPL004C YPR013CQ12145 317 aa6.19□□□□□ -1.42
LSP1YPL004C COX2P00410 251 aa6.18□□□□□ -1.42
LSP1YPL004C MPC2P38857 129 aa6.18□□□□□ -1.42
LSP1YPL004C GLE2P40066 365 aa6.18□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms