RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C POM33Q12164 279 aa6.31□□□□□ -1.4
RUP1YOR138C YPR071WQ12346 211 aa6.31□□□□□ -1.4
RUP1YOR138C PAA1Q12447 191 aaKnown RBP6.31□□□□□ -1.4
RUP1YOR138C YOR032W-AQ8TGS1 66 aa6.31□□□□□ -1.4
RUP1YOR138C YPT1P01123 206 aaKnown RBP6.3□□□□□ -1.4
RUP1YOR138C PHD1P36093 366 aa6.3□□□□□ -1.4
RUP1YOR138C UTH1P36135 365 aa6.3□□□□□ -1.4
RUP1YOR138C GAT2P40209 560 aa6.3□□□□□ -1.4
RUP1YOR138C YIL163CP40448 117 aa6.3□□□□□ -1.4
RUP1YOR138C PRM5P40476 318 aa6.3□□□□□ -1.4
RUP1YOR138C NRM1P53718 249 aa6.3□□□□□ -1.4
RUP1YOR138C HSK3P69852 69 aa6.3□□□□□ -1.4
RUP1YOR138C SMT3Q12306 101 aaKnown RBP6.3□□□□□ -1.4
RUP1YOR138C ILV5P06168 395 aaKnown RBP6.3□□□□□ -1.4
RUP1YOR138C YHR138CP38841 114 aaPredicted RBP6.3□□□□□ -1.4
RUP1YOR138C YJR015WP47090 510 aa6.3□□□□□ -1.4
RUP1YOR138C SAE3P89114 91 aa6.3□□□□□ -1.4
RUP1YOR138C STD1Q02794 444 aa6.3□□□□□ -1.4
RUP1YOR138C ATC1Q04005 294 aa6.3□□□□□ -1.4
RUP1YOR138C POM34Q12445 299 aa6.3□□□□□ -1.4
RUP1YOR138C RPL7AP05737 244 aaKnown RBP6.29□□□□□ -1.4
RUP1YOR138C RPS2P25443 254 aaKnown RBP6.29□□□□□ -1.4
RUP1YOR138C TCA17P32613 152 aa6.29□□□□□ -1.4
RUP1YOR138C GLC8P41818 229 aa6.29□□□□□ -1.4
RUP1YOR138C GPI2P46961 280 aa6.29□□□□□ -1.4
RUP1YOR138C RPL21AQ02753 160 aaKnown RBP6.29□□□□□ -1.4
RUP1YOR138C YOR105WQ08504 108 aa6.29□□□□□ -1.4
RUP1YOR138C RPL7BQ12213 244 aaKnown RBP6.29□□□□□ -1.4
RUP1YOR138C RPL21BQ12672 160 aaKnown RBP6.29□□□□□ -1.4
RUP1YOR138C Q0144Q9ZZW2 109 aa6.29□□□□□ -1.4
RUP1YOR138C ROX3P25046 220 aa6.28□□□□□ -1.4
RUP1YOR138C REC104P33323 182 aa6.28□□□□□ -1.4
RUP1YOR138C CPR5P35176 225 aa6.28□□□□□ -1.4
RUP1YOR138C MTC6P38849 526 aa6.28□□□□□ -1.4
RUP1YOR138C RPB11P38902 120 aa6.28□□□□□ -1.4
RUP1YOR138C DFG10P40526 253 aa6.28□□□□□ -1.4
RUP1YOR138C EGT2P42835 1041 aa6.28□□□□□ -1.4
RUP1YOR138C DSK2P48510 373 aa6.28□□□□□ -1.4
RUP1YOR138C YDR114CQ04597 100 aa6.28□□□□□ -1.4
RUP1YOR138C GEP5Q12393 293 aa6.28□□□□□ -1.4
RUP1YOR138C BOL1Q3E793 110 aa6.28□□□□□ -1.4
RUP1YOR138C RTG1P32607 177 aa6.28□□□□□ -1.4
RUP1YOR138C YDR391CQ04170 232 aa6.28□□□□□ -1.4
RUP1YOR138C SHH3Q04487 196 aa6.28□□□□□ -1.4
RUP1YOR138C NAT5Q08689 176 aa6.28□□□□□ -1.4
RUP1YOR138C ATP5P09457 212 aa6.27□□□□□ -1.41
RUP1YOR138C MRS3P10566 314 aa6.27□□□□□ -1.41
RUP1YOR138C ACP1P32463 125 aa6.27□□□□□ -1.41
RUP1YOR138C SPS18P32572 300 aa6.27□□□□□ -1.41
RUP1YOR138C MRPL39P36533 70 aa6.27□□□□□ -1.41
RUP1YOR138C YER084WP40057 128 aa6.27□□□□□ -1.41
RUP1YOR138C MRPL19P53875 158 aa6.27□□□□□ -1.41
RUP1YOR138C LPP1Q04396 274 aa6.27□□□□□ -1.41
RUP1YOR138C RRS1Q08746 203 aaKnown RBP6.27□□□□□ -1.41
RUP1YOR138C RNH203Q12338 110 aa6.27□□□□□ -1.41
RUP1YOR138C YDL085C-AQ3E7B7 68 aaKnown RBP6.27□□□□□ -1.41
RUP1YOR138C YCL001W-BQ96VH2 84 aa6.27□□□□□ -1.41
RUP1YOR138C YMR316C-AI2HB70 103 aa6.26□□□□□ -1.41
RUP1YOR138C PAM17P36147 197 aa6.26□□□□□ -1.41
RUP1YOR138C CYB5P40312 120 aa6.26□□□□□ -1.41
RUP1YOR138C MIC27P50945 234 aa6.26□□□□□ -1.41
RUP1YOR138C RFM1Q12192 310 aa6.26□□□□□ -1.41
RUP1YOR138C WTM2Q12206 467 aa6.26□□□□□ -1.41
RUP1YOR138C RPP2BP02400 110 aaKnown RBP6.26□□□□□ -1.41
RUP1YOR138C RPL35AP0CX84 120 aaKnown RBP6.26□□□□□ -1.41
RUP1YOR138C RPL35BP0CX85 120 aaKnown RBP6.26□□□□□ -1.41
RUP1YOR138C RNA15P25299 296 aaPredicted RBP6.26□□□□□ -1.41
RUP1YOR138C SUA7P29055 345 aaPredicted RBP6.26□□□□□ -1.41
RUP1YOR138C CDC40P40968 455 aaPredicted RBP6.26□□□□□ -1.41
RUP1YOR138C BOR1P53838 576 aa6.26□□□□□ -1.41
RUP1YOR138C ATG4P53867 494 aa6.26□□□□□ -1.41
RUP1YOR138C YPL067CQ02754 198 aa6.26□□□□□ -1.41
RUP1YOR138C YDR209CQ03480 137 aa6.26□□□□□ -1.41
RUP1YOR138C YHP1Q04116 353 aa6.25□□□□□ -1.41
RUP1YOR138C LIP2Q06005 328 aa6.25□□□□□ -1.41
RUP1YOR138C TMA7Q3E764 64 aaKnown RBP6.25□□□□□ -1.41
RUP1YOR138C YOS1Q3E834 85 aa6.25□□□□□ -1.41
RUP1YOR138C TOR1P35169 2470 aa6.25□□□□□ -1.41
RUP1YOR138C YLR302CO13544 120 aa6.25□□□□□ -1.41
RUP1YOR138C CUP2P15315 225 aa6.25□□□□□ -1.41
RUP1YOR138C DAL82P21705 255 aa6.25□□□□□ -1.41
RUP1YOR138C YBR090CP38253 122 aa6.25□□□□□ -1.41
RUP1YOR138C AME1P38313 324 aa6.25□□□□□ -1.41
RUP1YOR138C SRP14P38985 146 aa6.25□□□□□ -1.41
RUP1YOR138C YER134CP40081 178 aa6.25□□□□□ -1.41
RUP1YOR138C CSI2Q08054 341 aa6.25□□□□□ -1.41
RUP1YOR138C SOD1P00445 154 aaKnown RBP6.24□□□□□ -1.41
RUP1YOR138C UIP3P39547 235 aa6.24□□□□□ -1.41
RUP1YOR138C MRL1Q06815 381 aa6.24□□□□□ -1.41
RUP1YOR138C POS5Q06892 414 aa6.24□□□□□ -1.41
RUP1YOR138C YPS3Q12303 508 aa6.24□□□□□ -1.41
RUP1YOR138C YGL258W-AQ3E740 77 aa6.24□□□□□ -1.41
RUP1YOR138C VPS63O13549 108 aa6.23□□□□□ -1.41
RUP1YOR138C RPL9AP05738 191 aaKnown RBP6.23□□□□□ -1.41
RUP1YOR138C DFR1P07807 211 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
RUP1YOR138C MIX23P38162 196 aa6.23□□□□□ -1.41
RUP1YOR138C YBR184WP38299 523 aa6.23□□□□□ -1.41
RUP1YOR138C UBC13P52490 153 aa6.23□□□□□ -1.41
RUP1YOR138C IZH1Q03419 316 aa6.23□□□□□ -1.41
RUP1YOR138C YOL024WQ08172 172 aa6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms