RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W NAT3Q06504 195 aa2.9□□□□□ -1.95
VPS27YNR006W YOR093CQ12275 1648 aa2.89□□□□□ -1.95
VPS27YNR006W RAD10P06838 210 aa2.89□□□□□ -1.95
VPS27YNR006W CBP6P07253 162 aaPredicted RBP2.89□□□□□ -1.95
VPS27YNR006W NHP6AP11632 93 aaKnown RBP2.89□□□□□ -1.95
VPS27YNR006W URA5P13298 226 aaKnown RBP2.89□□□□□ -1.95
VPS27YNR006W RPL30P14120 105 aaKnown RBP2.89□□□□□ -1.95
VPS27YNR006W SKG1P36169 355 aa2.89□□□□□ -1.95
VPS27YNR006W SMD3P43321 101 aaKnown RBP2.89□□□□□ -1.95
VPS27YNR006W OST2P46964 130 aa2.89□□□□□ -1.95
VPS27YNR006W PIN3Q06449 215 aa2.89□□□□□ -1.95
VPS27YNR006W YOL014WQ08110 124 aa2.89□□□□□ -1.95
VPS27YNR006W CHC1P22137 1653 aaKnown RBP2.89□□□□□ -1.95
VPS27YNR006W ADH3P07246 375 aaKnown RBP2.88□□□□□ -1.95
VPS27YNR006W STP22P25604 385 aa2.88□□□□□ -1.95
VPS27YNR006W CPR5P35176 225 aa2.88□□□□□ -1.95
VPS27YNR006W OPY1P38271 328 aa2.88□□□□□ -1.95
VPS27YNR006W YNL200CP40165 246 aaKnown RBP2.88□□□□□ -1.95
VPS27YNR006W PHB1P40961 287 aa2.88□□□□□ -1.95
VPS27YNR006W YFL019CP43576 117 aa2.88□□□□□ -1.95
VPS27YNR006W YFR045WP43617 309 aa2.88□□□□□ -1.95
VPS27YNR006W HHT1P61830 136 aa2.88□□□□□ -1.95
VPS27YNR006W UBC7Q02159 165 aa2.88□□□□□ -1.95
VPS27YNR006W WIP1Q2V2P8 89 aa2.88□□□□□ -1.95
VPS27YNR006W VMR1P38735 1592 aa2.88□□□□□ -1.95
VPS27YNR006W PDR11P40550 1411 aa2.88□□□□□ -1.95
VPS27YNR006W SCL1P21243 252 aaKnown RBP2.88□□□□□ -1.95
VPS27YNR006W SUA7P29055 345 aaPredicted RBP2.88□□□□□ -1.95
VPS27YNR006W DLS1P40366 167 aa2.88□□□□□ -1.95
VPS27YNR006W GLC8P41818 229 aa2.88□□□□□ -1.95
VPS27YNR006W CAB4P53332 305 aa2.88□□□□□ -1.95
VPS27YNR006W YML100W-AQ8TGT0 57 aa2.88□□□□□ -1.95
VPS27YNR006W CDC8P00572 216 aa2.87□□□□□ -1.95
VPS27YNR006W NSG1P38837 291 aa2.87□□□□□ -1.95
VPS27YNR006W AVT2P39981 480 aa2.87□□□□□ -1.95
VPS27YNR006W XPT1P47165 209 aa2.87□□□□□ -1.95
VPS27YNR006W YOR268CQ08734 132 aa2.87□□□□□ -1.95
VPS27YNR006W IES3Q12345 250 aa2.87□□□□□ -1.95
VPS27YNR006W ATO3Q12359 275 aa2.87□□□□□ -1.95
VPS27YNR006W LTE1P07866 1435 aa2.87□□□□□ -1.95
VPS27YNR006W MMS1Q06211 1407 aa2.87□□□□□ -1.95
VPS27YNR006W CCA1P21269 546 aa2.86□□□□□ -1.95
VPS27YNR006W VTC1P40046 129 aaRIP-Chip data2.86□□□□□ -1.95not detected
VPS27YNR006W ARC15P40518 154 aaRIP-Chip data2.86□□□□□ -1.95not detected
VPS27YNR006W FIP1P45976 327 aa2.86□□□□□ -1.95
VPS27YNR006W BUD13P46947 266 aaPredicted RBP2.86□□□□□ -1.95
VPS27YNR006W GON7P46984 123 aa2.86□□□□□ -1.95
VPS27YNR006W FMN1Q03778 218 aa2.86□□□□□ -1.95
VPS27YNR006W YLR412C-AQ3E742 68 aa2.86□□□□□ -1.95
VPS27YNR006W PDR5P33302 1511 aaKnown RBP2.86□□□□□ -1.95
VPS27YNR006W BNI1P41832 1953 aa2.86□□□□□ -1.95
VPS27YNR006W TIM9O74700 87 aa2.86□□□□□ -1.95
VPS27YNR006W RPS19AP07280 144 aaKnown RBP2.86□□□□□ -1.95
VPS27YNR006W RPS19BP07281 144 aaPredicted RBP2.86□□□□□ -1.95
VPS27YNR006W AIM2P39721 246 aa2.86□□□□□ -1.95
VPS27YNR006W YPL073CP40323 161 aa2.86□□□□□ -1.95
VPS27YNR006W MCH1Q07376 486 aa2.86□□□□□ -1.95
VPS27YNR006W NUP188P52593 1655 aaKnown RBP2.85□□□□□ -1.95
VPS27YNR006W RPO41P13433 1351 aaKnown RBP2.85□□□□□ -1.95
VPS27YNR006W HIS3P06633 220 aa2.85□□□□□ -1.95
VPS27YNR006W PCL1P24867 279 aa2.85□□□□□ -1.95
VPS27YNR006W MRPL17P36528 281 aa2.85□□□□□ -1.95
VPS27YNR006W TRS20P38334 175 aa2.85□□□□□ -1.95
VPS27YNR006W FYV4P38783 130 aaPredicted RBP2.85□□□□□ -1.95
VPS27YNR006W PRE5P40302 234 aaKnown RBP2.85□□□□□ -1.95
VPS27YNR006W YFR054CP43622 192 aa2.85□□□□□ -1.95
VPS27YNR006W COF1Q03048 143 aaKnown RBP2.85□□□□□ -1.95
VPS27YNR006W SPG3Q04398 127 aaPredicted RBP2.85□□□□□ -1.95
VPS27YNR006W NUP192P47054 1683 aa2.85□□□□□ -1.95
VPS27YNR006W DNF2Q12675 1612 aa2.84□□□□□ -1.95
VPS27YNR006W YHR032W-AP0C5N6 59 aa2.84□□□□□ -1.95
VPS27YNR006W HSP26P15992 214 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
VPS27YNR006W VMA11P32842 164 aa2.84□□□□□ -1.95
VPS27YNR006W RPS1AP33442 255 aaKnown RBP2.84□□□□□ -1.95
VPS27YNR006W YER188WP40103 239 aa2.84□□□□□ -1.95
VPS27YNR006W ECO1P43605 281 aa2.84□□□□□ -1.95
VPS27YNR006W CCC1P47818 322 aa2.84□□□□□ -1.95
VPS27YNR006W YPD1Q07688 167 aa2.84□□□□□ -1.95
VPS27YNR006W IML1P47170 1584 aa2.84□□□□□ -1.95
VPS27YNR006W YAR023CD6VPM8 179 aa2.84□□□□□ -1.96
VPS27YNR006W YEL045CP32616 141 aa2.84□□□□□ -1.96
VPS27YNR006W PAN3P36102 679 aaPredicted RBP2.84□□□□□ -1.96
VPS27YNR006W FCY21P40039 528 aa2.84□□□□□ -1.96
VPS27YNR006W YER134CP40081 178 aa2.84□□□□□ -1.96
VPS27YNR006W GLR1P41921 483 aaKnown RBP2.84□□□□□ -1.96
VPS27YNR006W YDR274CP87283 123 aa2.84□□□□□ -1.96
VPS27YNR006W TMC1Q08422 150 aaPredicted RBP2.84□□□□□ -1.96
VPS27YNR006W Q0144Q9ZZW2 109 aa2.84□□□□□ -1.96
VPS27YNR006W ATP5P09457 212 aa2.83□□□□□ -1.96
VPS27YNR006W FYV12Q08559 129 aa2.83□□□□□ -1.96
VPS27YNR006W ODC2Q99297 307 aa2.83□□□□□ -1.96
VPS27YNR006W MLP1Q02455 1875 aaKnown RBP2.83□□□□□ -1.96
VPS27YNR006W RSA4P25382 515 aaKnown RBP2.82□□□□□ -1.96
VPS27YNR006W SPT14P32363 452 aa2.82□□□□□ -1.96
VPS27YNR006W YER137CP40083 148 aaKnown RBP2.82□□□□□ -1.96
VPS27YNR006W YER181CP40097 107 aa2.82□□□□□ -1.96
VPS27YNR006W AIF1P52923 378 aa2.82□□□□□ -1.96
VPS27YNR006W YGR219WP53307 113 aa2.82□□□□□ -1.96
VPS27YNR006W HAL1Q01766 294 aa2.82□□□□□ -1.96
VPS27YNR006W DIG2Q03373 323 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 110.5 ms