RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W MAG1P22134 296 aaKnown RBP4.87□□□□□ -1.63
CAF40YNL288W INO2P26798 304 aa4.87□□□□□ -1.63
CAF40YNL288W YKR045CP36138 183 aa4.87□□□□□ -1.63
CAF40YNL288W SRL3P36167 246 aa4.87□□□□□ -1.63
CAF40YNL288W YCR041WP37265 110 aa4.87□□□□□ -1.63
CAF40YNL288W LST8P41318 303 aa4.87□□□□□ -1.63
CAF40YNL288W YDL186WP48568 277 aa4.87□□□□□ -1.63
CAF40YNL288W ERG25P53045 309 aa4.87□□□□□ -1.63
CAF40YNL288W MRPL50P53724 139 aa4.87□□□□□ -1.63
CAF40YNL288W PDR17P53844 350 aa4.87□□□□□ -1.63
CAF40YNL288W EST3Q03096 181 aa4.87□□□□□ -1.63
CAF40YNL288W NDE2Q07500 545 aa4.87□□□□□ -1.63
CAF40YNL288W YJR112W-AQ3E743 109 aa4.87□□□□□ -1.63
CAF40YNL288W COA2Q3E823 68 aa4.87□□□□□ -1.63
CAF40YNL288W YHR213W-AQ8TGT4 77 aa4.87□□□□□ -1.63
CAF40YNL288W STF2P16965 84 aa4.86□□□□□ -1.63
CAF40YNL288W NSA2P40078 261 aaKnown RBP4.86□□□□□ -1.63
CAF40YNL288W COX15P40086 486 aa4.86□□□□□ -1.63
CAF40YNL288W YJL213WP40896 331 aa4.86□□□□□ -1.63
CAF40YNL288W CRH1P53301 507 aa4.86□□□□□ -1.63
CAF40YNL288W DCS1Q06151 350 aa4.86□□□□□ -1.63
CAF40YNL288W BER1Q06688 274 aaKnown RBP4.86□□□□□ -1.63
CAF40YNL288W POM34Q12445 299 aa4.86□□□□□ -1.63
CAF40YNL288W UTP20P35194 2493 aaKnown RBP4.86□□□□□ -1.63
CAF40YNL288W URA5P13298 226 aaKnown RBP4.85□□□□□ -1.63
CAF40YNL288W MRS4P23500 304 aa4.85□□□□□ -1.63
CAF40YNL288W YPT31P38555 223 aaKnown RBP4.85□□□□□ -1.63
CAF40YNL288W HXT14P42833 540 aa4.85□□□□□ -1.63
CAF40YNL288W AGX1P43567 385 aa4.85□□□□□ -1.63
CAF40YNL288W VPS55P47111 140 aa4.85□□□□□ -1.63
CAF40YNL288W YJR111CP47148 283 aaKnown RBP4.85□□□□□ -1.63
CAF40YNL288W HCH1P53834 153 aa4.85□□□□□ -1.63
CAF40YNL288W DYN2Q02647 92 aa4.85□□□□□ -1.63
CAF40YNL288W YMR082CQ04276 118 aa4.85□□□□□ -1.63
CAF40YNL288W HOR7Q05827 59 aa4.85□□□□□ -1.63
CAF40YNL288W FRQ1Q06389 190 aa4.85□□□□□ -1.63
CAF40YNL288W ANT1Q06497 328 aa4.85□□□□□ -1.63
CAF40YNL288W FCF2Q12035 217 aaPredicted RBP4.85□□□□□ -1.63
CAF40YNL288W AGC1Q12482 902 aa4.85□□□□□ -1.63
CAF40YNL288W YGR035W-AQ45U48 73 aa4.85□□□□□ -1.63
CAF40YNL288W YDR157WA0A023PZE8 133 aa4.84□□□□□ -1.63
CAF40YNL288W SOD1P00445 154 aaKnown RBP4.84□□□□□ -1.63
CAF40YNL288W YER190C-BP0CX94 160 aa4.84□□□□□ -1.63
CAF40YNL288W YEL077W-AP0CX95 160 aa4.84□□□□□ -1.63
CAF40YNL288W YGR296C-BP0CX96 160 aa4.84□□□□□ -1.63
CAF40YNL288W YPL283W-BP0CX97 160 aa4.84□□□□□ -1.63
CAF40YNL288W YPR204C-AP0CX98 160 aa4.84□□□□□ -1.63
CAF40YNL288W YFL068WP0CX99 160 aa4.84□□□□□ -1.63
CAF40YNL288W YLL066W-AP0CY00 160 aa4.84□□□□□ -1.63
CAF40YNL288W YLL067W-AP0CY01 160 aa4.84□□□□□ -1.63
CAF40YNL288W FRS1P15624 595 aaKnown RBP4.84□□□□□ -1.63
CAF40YNL288W FCY2P17064 533 aa4.84□□□□□ -1.63
CAF40YNL288W WSS1P38838 269 aa4.84□□□□□ -1.63
CAF40YNL288W ASP1P38986 381 aaPredicted RBP4.84□□□□□ -1.63
CAF40YNL288W YEA4P40004 342 aa4.84□□□□□ -1.63
CAF40YNL288W YIL077CP40508 320 aa4.84□□□□□ -1.63
CAF40YNL288W WWM1P43582 211 aaKnown RBP4.84□□□□□ -1.63
CAF40YNL288W SRB7P47822 140 aa4.84□□□□□ -1.63
CAF40YNL288W YLR179CQ06252 201 aaKnown RBP4.84□□□□□ -1.63
CAF40YNL288W PBP4Q07362 185 aaKnown RBP4.84□□□□□ -1.63
CAF40YNL288W YGL194C-AQ2V2P6 80 aa4.84□□□□□ -1.63
CAF40YNL288W FPR2P32472 135 aa4.83□□□□□ -1.64
CAF40YNL288W MRPL38P35996 138 aaPredicted RBP4.83□□□□□ -1.64
CAF40YNL288W YBL071CP38185 102 aa4.83□□□□□ -1.64
CAF40YNL288W GCV3P39726 170 aaPredicted RBP4.83□□□□□ -1.64
CAF40YNL288W TAD2P47058 250 aa4.83□□□□□ -1.64
CAF40YNL288W YGL117WP53133 265 aa4.83□□□□□ -1.64
CAF40YNL288W JAC1P53193 184 aa4.83□□□□□ -1.64
CAF40YNL288W MRPL23Q12487 163 aaPredicted RBP4.83□□□□□ -1.64
CAF40YNL288W RPS25BP0C0T4 108 aaKnown RBP4.82□□□□□ -1.64
CAF40YNL288W UBI4P0CG63 381 aaKnown RBP4.82□□□□□ -1.64
CAF40YNL288W CDS1P38221 457 aa4.82□□□□□ -1.64
CAF40YNL288W ICS2P38284 255 aa4.82□□□□□ -1.64
CAF40YNL288W DOG2P38773 246 aa4.82□□□□□ -1.64
CAF40YNL288W DOG1P38774 246 aa4.82□□□□□ -1.64
CAF40YNL288W YGR219WP53307 113 aa4.82□□□□□ -1.64
CAF40YNL288W MRPS17Q03246 237 aaPredicted RBP4.82□□□□□ -1.64
CAF40YNL288W PLP1Q04004 230 aa4.82□□□□□ -1.64
CAF40YNL288W POC4Q12245 148 aaPredicted RBP4.82□□□□□ -1.64
CAF40YNL288W PRR2Q12310 699 aa4.82□□□□□ -1.64
CAF40YNL288W PAA1Q12447 191 aaKnown RBP4.82□□□□□ -1.64
CAF40YNL288W RPS25AQ3E792 108 aaPredicted RBP4.82□□□□□ -1.64
CAF40YNL288W MRS3P10566 314 aa4.81□□□□□ -1.64
CAF40YNL288W YPS1P32329 569 aa4.81□□□□□ -1.64
CAF40YNL288W RRT1P38192 103 aa4.81□□□□□ -1.64
CAF40YNL288W YAR068WP39564 161 aa4.81□□□□□ -1.64
CAF40YNL288W YNL194CP40169 301 aa4.81□□□□□ -1.64
CAF40YNL288W TOS8P53147 276 aa4.81□□□□□ -1.64
CAF40YNL288W PRM3Q08931 133 aa4.81□□□□□ -1.64
CAF40YNL288W PET494P07390 489 aaPredicted RBP4.8□□□□□ -1.64
CAF40YNL288W ACP1P32463 125 aa4.8□□□□□ -1.64
CAF40YNL288W UPS2P35200 230 aa4.8□□□□□ -1.64
CAF40YNL288W QDR3P38227 689 aa4.8□□□□□ -1.64
CAF40YNL288W YBR292CP38357 123 aa4.8□□□□□ -1.64
CAF40YNL288W BDH1P39714 382 aa4.8□□□□□ -1.64
CAF40YNL288W YGR269WP40326 108 aa4.8□□□□□ -1.64
CAF40YNL288W FIP1P45976 327 aa4.8□□□□□ -1.64
CAF40YNL288W RPA43P46669 326 aa4.8□□□□□ -1.64
CAF40YNL288W YNR066CP53752 436 aa4.8□□□□□ -1.64
CAF40YNL288W DYN1P36022 4092 aa4.79□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms