RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W UBC9P50623 157 aaPredicted RBP2.02□□□□□ -2.09
UBP15YMR304W IZH1Q03419 316 aa2.02□□□□□ -2.09
UBP15YMR304W RAV2Q03956 351 aa2.02□□□□□ -2.09
UBP15YMR304W THI74Q04083 370 aa2.02□□□□□ -2.09
UBP15YMR304W LRS4Q04087 347 aaKnown RBP2.02□□□□□ -2.09
UBP15YMR304W YOL029CQ08187 201 aa2.02□□□□□ -2.09
UBP15YMR304W ICT1Q12385 394 aa2.02□□□□□ -2.09
UBP15YMR304W PRP46Q12417 451 aaPredicted RBP2.02□□□□□ -2.09
UBP15YMR304W SEC11P15367 167 aa2.02□□□□□ -2.09
UBP15YMR304W VID24P38263 362 aa2.02□□□□□ -2.09
UBP15YMR304W SBH1P52870 82 aa2.02□□□□□ -2.09
UBP15YMR304W CDH1P53197 566 aa2.02□□□□□ -2.09
UBP15YMR304W HPT1Q04178 221 aaKnown RBP2.02□□□□□ -2.09
UBP15YMR304W KAR4P25583 335 aa2.02□□□□□ -2.09
UBP15YMR304W YKR070WP36151 352 aaKnown RBP2.02□□□□□ -2.09
UBP15YMR304W YBL029WP38201 376 aa2.02□□□□□ -2.09
UBP15YMR304W YNL195CP40168 261 aa2.02□□□□□ -2.09
UBP15YMR304W HAC1P41546 238 aa2.02□□□□□ -2.09
UBP15YMR304W GPG1P53130 126 aa2.02□□□□□ -2.09
UBP15YMR304W SDS23P53172 527 aa2.02□□□□□ -2.09
UBP15YMR304W YNL143CP53908 130 aa2.02□□□□□ -2.09
UBP15YMR304W TRS23Q03784 219 aa2.02□□□□□ -2.09
UBP15YMR304W UTP15Q04305 513 aaKnown RBP2.02□□□□□ -2.09
UBP15YMR304W MRX8Q05473 314 aa2.02□□□□□ -2.09
UBP15YMR304W ZEO1Q08245 113 aa2.02□□□□□ -2.09
UBP15YMR304W SWT1Q12104 458 aa2.02□□□□□ -2.09
UBP15YMR304W IZH2Q12442 317 aa2.02□□□□□ -2.09
UBP15YMR304W YOL162WP0CF19 215 aa2.01□□□□□ -2.09
UBP15YMR304W UBI4P0CG63 381 aaKnown RBP2.01□□□□□ -2.09
UBP15YMR304W FCY2P17064 533 aa2.01□□□□□ -2.09
UBP15YMR304W YPS1P32329 569 aa2.01□□□□□ -2.09
UBP15YMR304W PRY2P36110 329 aa2.01□□□□□ -2.09
UBP15YMR304W DAD2P36162 133 aa2.01□□□□□ -2.09
UBP15YMR304W MCM22P47167 239 aa2.01□□□□□ -2.09
UBP15YMR304W ALG9P53868 555 aaKnown RBP2.01□□□□□ -2.09
UBP15YMR304W YMR087WQ04299 284 aa2.01□□□□□ -2.09
UBP15YMR304W GPI11Q06636 219 aa2.01□□□□□ -2.09
UBP15YMR304W CYR1P08678 2026 aaKnown RBP2.01□□□□□ -2.09
UBP15YMR304W PAM17P36147 197 aa2.01□□□□□ -2.09
UBP15YMR304W YAR068WP39564 161 aa2.01□□□□□ -2.09
UBP15YMR304W XBP1P40489 647 aa2.01□□□□□ -2.09
UBP15YMR304W YGR149WP48236 432 aa2.01□□□□□ -2.09
UBP15YMR304W COQ11Q05892 277 aa2.01□□□□□ -2.09
UBP15YMR304W ARC18Q05933 178 aaKnown RBP2.01□□□□□ -2.09
UBP15YMR304W NDD1Q08887 554 aa2.01□□□□□ -2.09
UBP15YMR304W ILV1P00927 576 aaKnown RBP2.01□□□□□ -2.09
UBP15YMR304W RPL11AP0C0W9 174 aaKnown RBP2.01□□□□□ -2.09
UBP15YMR304W FMT1P32785 401 aa2.01□□□□□ -2.09
UBP15YMR304W YKL107WP34251 309 aa2.01□□□□□ -2.09
UBP15YMR304W YJL193WP39542 402 aa2.01□□□□□ -2.09
UBP15YMR304W PAU5P43575 122 aa2.01□□□□□ -2.09
UBP15YMR304W AIM25P47140 327 aa2.01□□□□□ -2.09
UBP15YMR304W TRM9P49957 279 aa2.01□□□□□ -2.09
UBP15YMR304W MMS2P53152 137 aa2.01□□□□□ -2.09
UBP15YMR304W GEP7P53171 287 aa2.01□□□□□ -2.09
UBP15YMR304W TIM8P57744 87 aa2.01□□□□□ -2.09
UBP15YMR304W YMR178WQ03219 274 aaKnown RBP2.01□□□□□ -2.09
UBP15YMR304W PKR1Q03880 122 aaKnown RBP2.01□□□□□ -2.09
UBP15YMR304W TSA2Q04120 196 aa2.01□□□□□ -2.09
UBP15YMR304W SHH4Q06236 168 aa2.01□□□□□ -2.09
UBP15YMR304W NAT5Q08689 176 aa2.01□□□□□ -2.09
UBP15YMR304W RPL11BQ3E757 174 aaPredicted RBP2.01□□□□□ -2.09
UBP15YMR304W TFB5Q3E7C1 72 aaPredicted RBP2.01□□□□□ -2.09
UBP15YMR304W TDA8Q6B2U8 126 aa2.01□□□□□ -2.09
UBP15YMR304W DET1Q99288 334 aaKnown RBP2.01□□□□□ -2.09
UBP15YMR304W YBR056W-AI2HB52 66 aa2□□□□□ -2.09
UBP15YMR304W YOR304C-AO14468 76 aa2□□□□□ -2.09
UBP15YMR304W MRPL20P22354 195 aaPredicted RBP2□□□□□ -2.09
UBP15YMR304W MRPL27P36526 146 aaPredicted RBP2□□□□□ -2.09
UBP15YMR304W ECM14P38836 430 aa2□□□□□ -2.09
UBP15YMR304W YER079WP40052 210 aaKnown RBP2□□□□□ -2.09
UBP15YMR304W FIP1P45976 327 aa2□□□□□ -2.09
UBP15YMR304W EMI1Q04406 187 aa2□□□□□ -2.09
UBP15YMR304W PEX27Q08580 376 aa2□□□□□ -2.09
UBP15YMR304W YOR387CQ08910 206 aa2□□□□□ -2.09
UBP15YMR304W YIL102C-AQ2V2P5 75 aa2□□□□□ -2.09
UBP15YMR304W YKL183C-AQ3E765 70 aa2□□□□□ -2.09
UBP15YMR304W HEM2P05373 342 aa2□□□□□ -2.09
UBP15YMR304W RPS25BP0C0T4 108 aaKnown RBP2□□□□□ -2.09
UBP15YMR304W UBC4P15731 148 aa2□□□□□ -2.09
UBP15YMR304W YCR025CP25352 136 aa2□□□□□ -2.09
UBP15YMR304W MXR2P25566 168 aa2□□□□□ -2.09
UBP15YMR304W PAN3P36102 679 aaPredicted RBP2□□□□□ -2.09
UBP15YMR304W YDR366CP87287 132 aa2□□□□□ -2.09
UBP15YMR304W MZM1Q03429 123 aaPredicted RBP2□□□□□ -2.09
UBP15YMR304W RRS1Q08746 203 aaKnown RBP2□□□□□ -2.09
UBP15YMR304W WIP1Q2V2P8 89 aa2□□□□□ -2.09
UBP15YMR304W RPS25AQ3E792 108 aaPredicted RBP2□□□□□ -2.09
UBP15YMR304W KTI11Q3E840 82 aa2□□□□□ -2.09
UBP15YMR304W KSH1Q8TGJ3 72 aa2□□□□□ -2.09
UBP15YMR304W CNE1P27825 502 aa1.99□□□□□ -2.09
UBP15YMR304W MRPS5P33759 307 aa1.99□□□□□ -2.09
UBP15YMR304W SMP1P38128 452 aa1.99□□□□□ -2.09
UBP15YMR304W TRS20P38334 175 aa1.99□□□□□ -2.09
UBP15YMR304W HMS2P47175 358 aa1.99□□□□□ -2.09
UBP15YMR304W BIO4P53630 237 aa1.99□□□□□ -2.09
UBP15YMR304W TRM112P53738 135 aaPredicted RBP1.99□□□□□ -2.09
UBP15YMR304W AAD15Q08361 143 aa1.99□□□□□ -2.09
UBP15YMR304W YMR030W-AQ3E760 96 aa1.99□□□□□ -2.09
UBP15YMR304W ATG40Q99325 256 aa1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 106.9 ms