RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM3, Length 270 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM3	YLR438C-A	QCR9	P22289	66 aa		10.19	□□□□□ -0.78
LSM3	YLR438C-A	CDC50	P25656	391 aa		10.19	□□□□□ -0.78
LSM3	YLR438C-A	ACP1	P32463	125 aa		10.19	□□□□□ -0.78
LSM3	YLR438C-A	ECM25	P32525	599 aa		10.19	□□□□□ -0.78
LSM3	YLR438C-A	PTC7	P38797	343 aa		10.19	□□□□□ -0.78
LSM3	YLR438C-A	SPC25	P40014	221 aa		10.19	□□□□□ -0.78
LSM3	YLR438C-A	MIC27	P50945	234 aa		10.19	□□□□□ -0.78
LSM3	YLR438C-A	BOR1	P53838	576 aa		10.19	□□□□□ -0.78
LSM3	YLR438C-A	YHP1	Q04116	353 aa		10.19	□□□□□ -0.78
LSM3	YLR438C-A	POM34	Q12445	299 aa		10.19	□□□□□ -0.78
LSM3	YLR438C-A	QDR3	P38227	689 aa		10.18	□□□□□ -0.78
LSM3	YLR438C-A	WWM1	P43582	211 aa	Known RBP	10.18	□□□□□ -0.78
LSM3	YLR438C-A	SNN1	P48232	102 aa		10.18	□□□□□ -0.78
LSM3	YLR438C-A	CAF40	P53829	373 aa		10.18	□□□□□ -0.78
LSM3	YLR438C-A	PIS1	P06197	220 aa	Known RBP	10.17	□□□□□ -0.78
LSM3	YLR438C-A	INO2	P26798	304 aa		10.17	□□□□□ -0.78
LSM3	YLR438C-A	MSK1	P32048	576 aa		10.17	□□□□□ -0.78
LSM3	YLR438C-A	SHB17	P36136	271 aa	Known RBP	10.17	□□□□□ -0.78
LSM3	YLR438C-A	YCR041W	P37265	110 aa		10.17	□□□□□ -0.78
LSM3	YLR438C-A	AVT5	P38176	459 aa		10.17	□□□□□ -0.78
LSM3	YLR438C-A	RRT1	P38192	103 aa		10.17	□□□□□ -0.78
LSM3	YLR438C-A	CDS1	P38221	457 aa		10.17	□□□□□ -0.78
LSM3	YLR438C-A	DOG2	P38773	246 aa		10.17	□□□□□ -0.78
LSM3	YLR438C-A	DOG1	P38774	246 aa		10.17	□□□□□ -0.78
LSM3	YLR438C-A	SIT1	P39980	628 aa		10.17	□□□□□ -0.78
LSM3	YLR438C-A	FMP41	P53889	259 aa	Known RBP	10.17	□□□□□ -0.78
LSM3	YLR438C-A	TMA23	Q03525	211 aa		10.17	□□□□□ -0.78
LSM3	YLR438C-A	SHH3	Q04487	196 aa		10.17	□□□□□ -0.78
LSM3	YLR438C-A	CTR3	Q06686	241 aa		10.17	□□□□□ -0.78
LSM3	YLR438C-A	PBP4	Q07362	185 aa	Known RBP	10.17	□□□□□ -0.78
LSM3	YLR438C-A	ATP14	Q12349	124 aa		10.17	□□□□□ -0.78
LSM3	YLR438C-A	AHT1	P29589	182 aa		10.16	□□□□□ -0.78
LSM3	YLR438C-A	YPS1	P32329	569 aa		10.16	□□□□□ -0.78
LSM3	YLR438C-A	ODC1	Q03028	310 aa		10.16	□□□□□ -0.78
LSM3	YLR438C-A	DFR1	P07807	211 aa	Known RBP RIP-Chip data	10.15	□□□□□ -0.78	not detected
LSM3	YLR438C-A	YBL059W	P34224	193 aa		10.15	□□□□□ -0.78
LSM3	YLR438C-A	RIB5	P38145	238 aa		10.15	□□□□□ -0.78
LSM3	YLR438C-A	CSH1	P38287	376 aa		10.15	□□□□□ -0.78
LSM3	YLR438C-A	FLO5	P38894	1075 aa		10.15	□□□□□ -0.78
LSM3	YLR438C-A	YAR068W	P39564	161 aa		10.15	□□□□□ -0.78
LSM3	YLR438C-A	YDL186W	P48568	277 aa		10.15	□□□□□ -0.78
LSM3	YLR438C-A	RIB4	P50861	169 aa	Predicted RBP	10.15	□□□□□ -0.78
LSM3	YLR438C-A	LST7	P53237	242 aa		10.15	□□□□□ -0.78
LSM3	YLR438C-A	ERV25	P54837	211 aa	Known RBP	10.15	□□□□□ -0.78
LSM3	YLR438C-A	IRC23	Q08416	157 aa		10.15	□□□□□ -0.78
LSM3	YLR438C-A	MSA1	Q08471	629 aa		10.15	□□□□□ -0.78
LSM3	YLR438C-A	COX19	Q3E731	98 aa		10.15	□□□□□ -0.78
LSM3	YLR438C-A	YMR316C-A	I2HB70	103 aa		10.14	□□□□□ -0.79
LSM3	YLR438C-A	DER1	P38307	211 aa		10.14	□□□□□ -0.79
LSM3	YLR438C-A	BDH1	P39714	382 aa		10.14	□□□□□ -0.79
LSM3	YLR438C-A	SMD3	P43321	101 aa	Known RBP	10.14	□□□□□ -0.79
LSM3	YLR438C-A	VPS55	P47111	140 aa		10.14	□□□□□ -0.79
LSM3	YLR438C-A	YMR007W	Q03675	126 aa		10.14	□□□□□ -0.79
LSM3	YLR438C-A	SDH7	Q04401	133 aa		10.14	□□□□□ -0.79
LSM3	YLR438C-A	RXT3	Q07458	294 aa		10.14	□□□□□ -0.79
LSM3	YLR438C-A	SME1	Q12330	94 aa	Predicted RBP	10.14	□□□□□ -0.79
LSM3	YLR438C-A	CPD1	P53314	239 aa		10.13	□□□□□ -0.79
LSM3	YLR438C-A	SWT21	P53873	357 aa	Predicted RBP	10.13	□□□□□ -0.79
LSM3	YLR438C-A	HOR7	Q05827	59 aa		10.13	□□□□□ -0.79
LSM3	YLR438C-A	SRB6	P32570	121 aa		10.12	□□□□□ -0.79
LSM3	YLR438C-A	RTS2	P40962	232 aa		10.12	□□□□□ -0.79
LSM3	YLR438C-A	SAS2	P40963	338 aa		10.12	□□□□□ -0.79
LSM3	YLR438C-A	MCM22	P47167	239 aa		10.12	□□□□□ -0.79
LSM3	YLR438C-A	AVO2	Q04749	426 aa		10.12	□□□□□ -0.79
LSM3	YLR438C-A	YCR022C	P25620	114 aa		10.11	□□□□□ -0.79
LSM3	YLR438C-A	TOS8	P53147	276 aa		10.11	□□□□□ -0.79
LSM3	YLR438C-A	YGR018C	P53211	109 aa		10.11	□□□□□ -0.79
LSM3	YLR438C-A	CAB4	P53332	305 aa		10.11	□□□□□ -0.79
LSM3	YLR438C-A	ATC1	Q04005	294 aa		10.11	□□□□□ -0.79
LSM3	YLR438C-A	YOR352W	Q08816	343 aa		10.11	□□□□□ -0.79
LSM3	YLR438C-A	ALK2	P32789	676 aa	Predicted RBP	10.1	□□□□□ -0.79
LSM3	YLR438C-A	SDO1	Q07953	250 aa	Known RBP	10.1	□□□□□ -0.79
LSM3	YLR438C-A	PET494	P07390	489 aa	Predicted RBP	10.09	□□□□□ -0.79
LSM3	YLR438C-A	LDS1	P31379	325 aa		10.09	□□□□□ -0.79
LSM3	YLR438C-A	RPL14A	P36105	138 aa	Known RBP	10.09	□□□□□ -0.79
LSM3	YLR438C-A	RPL14B	P38754	138 aa	Known RBP	10.09	□□□□□ -0.79
LSM3	YLR438C-A	TAX4	P47030	604 aa		10.09	□□□□□ -0.79
LSM3	YLR438C-A	YGR219W	P53307	113 aa		10.09	□□□□□ -0.79
LSM3	YLR438C-A	YML122C	Q03207	126 aa		10.09	□□□□□ -0.79
LSM3	YLR438C-A	YNK1	P36010	153 aa	Known RBP	10.08	□□□□□ -0.8
LSM3	YLR438C-A	PRY2	P36110	329 aa		10.08	□□□□□ -0.8
LSM3	YLR438C-A	ATG27	P46989	271 aa		10.08	□□□□□ -0.8
LSM3	YLR438C-A	GNP1	P48813	663 aa		10.08	□□□□□ -0.8
LSM3	YLR438C-A	PAU4	P53427	120 aa		10.08	□□□□□ -0.8
LSM3	YLR438C-A	ORM2	Q06144	216 aa		10.08	□□□□□ -0.8
LSM3	YLR438C-A	CDC7	P06243	507 aa		10.07	□□□□□ -0.8
LSM3	YLR438C-A	YER190C-B	P0CX94	160 aa		10.07	□□□□□ -0.8
LSM3	YLR438C-A	YEL077W-A	P0CX95	160 aa		10.07	□□□□□ -0.8
LSM3	YLR438C-A	YGR296C-B	P0CX96	160 aa		10.07	□□□□□ -0.8
LSM3	YLR438C-A	YPL283W-B	P0CX97	160 aa		10.07	□□□□□ -0.8
LSM3	YLR438C-A	YPR204C-A	P0CX98	160 aa		10.07	□□□□□ -0.8
LSM3	YLR438C-A	YFL068W	P0CX99	160 aa		10.07	□□□□□ -0.8
LSM3	YLR438C-A	YLL066W-A	P0CY00	160 aa		10.07	□□□□□ -0.8
LSM3	YLR438C-A	YLL067W-A	P0CY01	160 aa		10.07	□□□□□ -0.8
LSM3	YLR438C-A	YMR181C	Q03231	154 aa		10.07	□□□□□ -0.8
LSM3	YLR438C-A	VMA9	Q3E7B6	73 aa		10.07	□□□□□ -0.8
LSM3	YLR438C-A	RPS2	P25443	254 aa	Known RBP	10.06	□□□□□ -0.8
LSM3	YLR438C-A	YNR071C	P53757	342 aa		10.06	□□□□□ -0.8
LSM3	YLR438C-A	PRM3	Q08931	133 aa		10.06	□□□□□ -0.8
LSM3	YLR438C-A	YGR035W-A	Q45U48	73 aa		10.06	□□□□□ -0.8

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