RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C RPL40BP0CH09 128 aaKnown RBP1.08□□□□□ -2.24
SMD3YLR147C RPB7P34087 171 aa1.08□□□□□ -2.24
SMD3YLR147C UBC12P52491 188 aa1.08□□□□□ -2.24
SMD3YLR147C PGA2P53903 129 aa1.08□□□□□ -2.24
SMD3YLR147C AIM36Q03798 255 aa1.08□□□□□ -2.24
SMD3YLR147C DYN3Q04949 312 aa1.08□□□□□ -2.24
SMD3YLR147C SNQ2P32568 1501 aaKnown RBP1.08□□□□□ -2.24
SMD3YLR147C SPO14P36126 1683 aa1.07□□□□□ -2.24
SMD3YLR147C MBF1O14467 151 aaKnown RBP1.07□□□□□ -2.24
SMD3YLR147C ARP3P47117 449 aaKnown RBP1.07□□□□□ -2.24
SMD3YLR147C YLR460CP54007 376 aa1.07□□□□□ -2.24
SMD3YLR147C LCL2Q08045 131 aa1.07□□□□□ -2.24
SMD3YLR147C COA3Q3E7B2 85 aa1.07□□□□□ -2.24
SMD3YLR147C TAO3P40468 2376 aa1.07□□□□□ -2.24
SMD3YLR147C PRP8P33334 2413 aaKnown RBP1.06□□□□□ -2.24
SMD3YLR147C ASF2P32448 525 aaPredicted RBP1.06□□□□□ -2.24
SMD3YLR147C YER134CP40081 178 aa1.06□□□□□ -2.24
SMD3YLR147C THG1P53215 237 aaKnown RBP1.06□□□□□ -2.24
SMD3YLR147C BNA7Q04066 261 aa1.06□□□□□ -2.24
SMD3YLR147C YPR013CQ12145 317 aa1.06□□□□□ -2.24
SMD3YLR147C YCL012CQ8J0M4 134 aa1.06□□□□□ -2.24
SMD3YLR147C FMP27Q06179 2628 aa1.06□□□□□ -2.24
SMD3YLR147C USO1P25386 1790 aa1.06□□□□□ -2.24
SMD3YLR147C TY1B-BRQ12193 1756 aa1.06□□□□□ -2.24
SMD3YLR147C TY1B-GR3Q12316 1755 aa1.06□□□□□ -2.24
SMD3YLR147C TY1B-ORQ92393 1755 aa1.06□□□□□ -2.24
SMD3YLR147C CAT8P39113 1433 aa1.06□□□□□ -2.24
SMD3YLR147C VTH1P40438 1549 aa1.05□□□□□ -2.24
SMD3YLR147C VTH2P40890 1549 aa1.05□□□□□ -2.24
SMD3YLR147C UTP20P35194 2493 aaKnown RBP1.05□□□□□ -2.24
SMD3YLR147C GCN2P15442 1659 aa1.05□□□□□ -2.24
SMD3YLR147C HTB1P02293 131 aaKnown RBP1.05□□□□□ -2.24
SMD3YLR147C HTB2P02294 131 aa1.05□□□□□ -2.24
SMD3YLR147C AIM2P39721 246 aa1.05□□□□□ -2.24
SMD3YLR147C RNH1Q04740 348 aa1.05□□□□□ -2.24
SMD3YLR147C CHC1P22137 1653 aaKnown RBP1.04□□□□□ -2.24
SMD3YLR147C MRS1P07266 363 aa1.04□□□□□ -2.24
SMD3YLR147C YPK2P18961 677 aa1.04□□□□□ -2.24
SMD3YLR147C YMR295CQ03559 197 aa1.04□□□□□ -2.24
SMD3YLR147C SHH3Q04487 196 aa1.04□□□□□ -2.24
SMD3YLR147C FUS2Q05670 677 aa1.04□□□□□ -2.24
SMD3YLR147C YOL014WQ08110 124 aa1.04□□□□□ -2.24
SMD3YLR147C VMR1P38735 1592 aa1.04□□□□□ -2.24
SMD3YLR147C YBT1P32386 1661 aa1.04□□□□□ -2.24
SMD3YLR147C YJR111CP47148 283 aaKnown RBP1.03□□□□□ -2.24
SMD3YLR147C NAT3Q06504 195 aa1.03□□□□□ -2.24
SMD3YLR147C RAD9P14737 1309 aa1.03□□□□□ -2.24
SMD3YLR147C YRF1-2P40105 1681 aa1.03□□□□□ -2.24
SMD3YLR147C RPO21P04050 1733 aaKnown RBP1.03□□□□□ -2.24
SMD3YLR147C TIR1P10863 254 aa1.02□□□□□ -2.25
SMD3YLR147C PAM17P36147 197 aa1.02□□□□□ -2.25
SMD3YLR147C YNL033WP53964 284 aa1.02□□□□□ -2.25
SMD3YLR147C DIG2Q03373 323 aaKnown RBP1.02□□□□□ -2.25
SMD3YLR147C UPS3Q04006 179 aa1.02□□□□□ -2.25
SMD3YLR147C TY1B-NL2Q99337 1749 aaKnown RBP1.02□□□□□ -2.25
SMD3YLR147C PDR12Q02785 1511 aa1.01□□□□□ -2.25
SMD3YLR147C GEA1P47102 1408 aaPredicted RBP1.01□□□□□ -2.25
SMD3YLR147C KRE5P22023 1365 aa1.01□□□□□ -2.25
SMD3YLR147C CDC36P06100 191 aaPredicted RBP1.01□□□□□ -2.25
SMD3YLR147C MTW1P39731 289 aa1.01□□□□□ -2.25
SMD3YLR147C RFC4P40339 323 aaKnown RBP1.01□□□□□ -2.25
SMD3YLR147C TY2B-LR1P0C2J3 1770 aa1.01□□□□□ -2.25
SMD3YLR147C TY2B-FP0CX63 1770 aa1.01□□□□□ -2.25
SMD3YLR147C TY2B-GR2P0CX64 1770 aa1.01□□□□□ -2.25
SMD3YLR147C TY2B-CP25384 1770 aa1.01□□□□□ -2.25
SMD3YLR147C TY2B-DR2Q03494 1770 aa1.01□□□□□ -2.25
SMD3YLR147C TY1B-DR1Q03855 1755 aa1.01□□□□□ -2.25
SMD3YLR147C TY2B-DR3Q07791 1770 aaKnown RBP1.01□□□□□ -2.25
SMD3YLR147C TY2B-OR1Q12113 1770 aa1.01□□□□□ -2.25
SMD3YLR147C TY2B-DR1Q12472 1770 aa1.01□□□□□ -2.25
SMD3YLR147C TY2B-OR2Q12501 1770 aa1.01□□□□□ -2.25
SMD3YLR147C IRA1P18963 3092 aa1□□□□□ -2.25
SMD3YLR147C ROM2P51862 1356 aaKnown RBP1□□□□□ -2.25
SMD3YLR147C MGT1P26188 188 aa1□□□□□ -2.25
SMD3YLR147C NOP19P53317 196 aaPredicted RBP1□□□□□ -2.25
SMD3YLR147C YDR391CQ04170 232 aa1□□□□□ -2.25
SMD3YLR147C YML100W-AQ8TGT0 57 aa1□□□□□ -2.25
SMD3YLR147C SEN2P16658 377 aa0.99□□□□□ -2.25
SMD3YLR147C ARO7P32178 256 aa0.99□□□□□ -2.25
SMD3YLR147C SFK1P35735 353 aa0.99□□□□□ -2.25
SMD3YLR147C MRPL15P36523 253 aa0.99□□□□□ -2.25
SMD3YLR147C FMP23P38231 175 aa0.99□□□□□ -2.25
SMD3YLR147C ALB1P47019 175 aaPredicted RBP0.99□□□□□ -2.25
SMD3YLR147C MMS2P53152 137 aa0.99□□□□□ -2.25
SMD3YLR147C YMR253CQ04835 414 aa0.99□□□□□ -2.25
SMD3YLR147C YPR203WQ08994 102 aa0.99□□□□□ -2.25
SMD3YLR147C MLP2P40457 1679 aa0.99□□□□□ -2.25
SMD3YLR147C TY1B-HO13535 1793 aa0.98□□□□□ -2.25
SMD3YLR147C TY1B-DR5P0C2I2 1755 aa0.98□□□□□ -2.25
SMD3YLR147C TY1B-DR6P0C2I3 1755 aa0.98□□□□□ -2.25
SMD3YLR147C TY1B-LR2P0C2I5 1755 aa0.98□□□□□ -2.25
SMD3YLR147C TY1B-LR3P0C2I6 1755 aaKnown RBP0.98□□□□□ -2.25
SMD3YLR147C TY1B-PR1P0C2I9 1755 aaKnown RBP0.98□□□□□ -2.25
SMD3YLR147C TY1B-PR2P0C2J0 1756 aa0.98□□□□□ -2.25
SMD3YLR147C TY1B-PR3P0C2J1 1755 aaKnown RBP0.98□□□□□ -2.25
SMD3YLR147C TY1B-JR1P47098 1755 aa0.98□□□□□ -2.25
SMD3YLR147C TY1B-ML2Q03434 1755 aaKnown RBP0.98□□□□□ -2.25
SMD3YLR147C TY1B-ER1Q03612 1755 aa0.98□□□□□ -2.25
SMD3YLR147C TY1B-ML1Q04711 1755 aaKnown RBP0.98□□□□□ -2.25
SMD3YLR147C TY1B-GR2Q12269 1755 aa0.98□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 52.9 ms