RNA–Protein interactions for RNA: YHR113W

APE4, Transcript of Cytoplasmic aspartyl aminopeptidase with possible vacuole function, yeastyeast

Gene APE4, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APE4YHR113W COA4Q05809 96 aa5.54□□□□□ -1.52
APE4YHR113W ATG33Q06485 197 aa5.54□□□□□ -1.52
APE4YHR113W YPL264CQ08980 353 aa5.54□□□□□ -1.52
APE4YHR113W PAA1Q12447 191 aaKnown RBP5.54□□□□□ -1.52
APE4YHR113W YBR298C-AQ8TGK4 73 aa5.54□□□□□ -1.52
APE4YHR113W YHR213W-AQ8TGT4 77 aa5.54□□□□□ -1.52
APE4YHR113W YKR045CP36138 183 aa5.53□□□□□ -1.52
APE4YHR113W SNX4P47057 423 aa5.53□□□□□ -1.52
APE4YHR113W EST3Q03096 181 aa5.53□□□□□ -1.52
APE4YHR113W POC4Q12245 148 aaPredicted RBP5.53□□□□□ -1.52
APE4YHR113W UTP20P35194 2493 aaKnown RBP5.53□□□□□ -1.52
APE4YHR113W RPS25BP0C0T4 108 aaKnown RBP5.52□□□□□ -1.53
APE4YHR113W UBI4P0CG63 381 aaKnown RBP5.52□□□□□ -1.53
APE4YHR113W YPS1P32329 569 aa5.52□□□□□ -1.53
APE4YHR113W MRPL38P35996 138 aaPredicted RBP5.52□□□□□ -1.53
APE4YHR113W PRS4P38063 326 aaPredicted RBP5.52□□□□□ -1.53
APE4YHR113W GCV3P39726 170 aaPredicted RBP5.52□□□□□ -1.53
APE4YHR113W HXT14P42833 540 aa5.52□□□□□ -1.53
APE4YHR113W YMR082CQ04276 118 aa5.52□□□□□ -1.53
APE4YHR113W FRQ1Q06389 190 aa5.52□□□□□ -1.53
APE4YHR113W LSO2Q3E772 92 aaKnown RBP5.52□□□□□ -1.53
APE4YHR113W RPS25AQ3E792 108 aaPredicted RBP5.52□□□□□ -1.53
APE4YHR113W MRS3P10566 314 aa5.51□□□□□ -1.53
APE4YHR113W UPS2P35200 230 aa5.51□□□□□ -1.53
APE4YHR113W YNK1P36010 153 aaKnown RBP5.51□□□□□ -1.53
APE4YHR113W ASP1P38986 381 aaPredicted RBP5.51□□□□□ -1.53
APE4YHR113W YEA4P40004 342 aa5.51□□□□□ -1.53
APE4YHR113W YJL213WP40896 331 aa5.51□□□□□ -1.53
APE4YHR113W TAX4P47030 604 aa5.51□□□□□ -1.53
APE4YHR113W HCH1P53834 153 aa5.51□□□□□ -1.53
APE4YHR113W YHP1Q04116 353 aa5.51□□□□□ -1.53
APE4YHR113W SPG4Q04438 115 aa5.51□□□□□ -1.53
APE4YHR113W PBP4Q07362 185 aaKnown RBP5.51□□□□□ -1.53
APE4YHR113W IRC23Q08416 157 aa5.51□□□□□ -1.53
APE4YHR113W RKI1Q12189 258 aa5.51□□□□□ -1.53
APE4YHR113W ILV5P06168 395 aaKnown RBP5.51□□□□□ -1.53
APE4YHR113W STF2P16965 84 aa5.51□□□□□ -1.53
APE4YHR113W RPD3P32561 433 aa5.51□□□□□ -1.53
APE4YHR113W AFR1P33304 620 aa5.51□□□□□ -1.53
APE4YHR113W YBL071CP38185 102 aa5.51□□□□□ -1.53
APE4YHR113W HOR7Q05827 59 aa5.51□□□□□ -1.53
APE4YHR113W USV1Q12132 391 aa5.51□□□□□ -1.53
APE4YHR113W SOD1P00445 154 aaKnown RBP5.5□□□□□ -1.53
APE4YHR113W INO2P26798 304 aa5.5□□□□□ -1.53
APE4YHR113W PEX7P39108 375 aa5.5□□□□□ -1.53
APE4YHR113W YJR015WP47090 510 aa5.5□□□□□ -1.53
APE4YHR113W VPS55P47111 140 aa5.5□□□□□ -1.53
APE4YHR113W TOS8P53147 276 aa5.5□□□□□ -1.53
APE4YHR113W YAP1802P53309 568 aa5.5□□□□□ -1.53
APE4YHR113W ERV25P54837 211 aaKnown RBP5.5□□□□□ -1.53
APE4YHR113W MRPS17Q03246 237 aaPredicted RBP5.5□□□□□ -1.53
APE4YHR113W RAD28Q12021 506 aa5.5□□□□□ -1.53
APE4YHR113W YPS3Q12303 508 aa5.5□□□□□ -1.53
APE4YHR113W PRR2Q12310 699 aa5.5□□□□□ -1.53
APE4YHR113W DFR1P07807 211 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
APE4YHR113W ELO2P25358 347 aa5.49□□□□□ -1.53
APE4YHR113W YAR068WP39564 161 aa5.49□□□□□ -1.53
APE4YHR113W BUL1P48524 976 aa5.49□□□□□ -1.53
APE4YHR113W ERG25P53045 309 aa5.49□□□□□ -1.53
APE4YHR113W YMR181CQ03231 154 aa5.49□□□□□ -1.53
APE4YHR113W TDA6Q06466 467 aa5.49□□□□□ -1.53
APE4YHR113W ARR3Q06598 404 aa5.49□□□□□ -1.53
APE4YHR113W POS5Q06892 414 aa5.49□□□□□ -1.53
APE4YHR113W YDL242WQ07746 117 aa5.49□□□□□ -1.53
APE4YHR113W YGR035W-AQ45U48 73 aa5.49□□□□□ -1.53
APE4YHR113W SPO13P23624 291 aa5.48□□□□□ -1.53
APE4YHR113W RRT1P38192 103 aa5.48□□□□□ -1.53
APE4YHR113W CDS1P38221 457 aa5.48□□□□□ -1.53
APE4YHR113W PTC7P38797 343 aa5.48□□□□□ -1.53
APE4YHR113W VMA7P39111 118 aa5.48□□□□□ -1.53
APE4YHR113W CPD1P53314 239 aa5.48□□□□□ -1.53
APE4YHR113W YNR066CP53752 436 aa5.48□□□□□ -1.53
APE4YHR113W ODC1Q03028 310 aa5.48□□□□□ -1.53
APE4YHR113W YLR179CQ06252 201 aaKnown RBP5.48□□□□□ -1.53
APE4YHR113W CTR3Q06686 241 aa5.48□□□□□ -1.53
APE4YHR113W YOR015WQ12169 119 aa5.48□□□□□ -1.53
APE4YHR113W YER190C-BP0CX94 160 aa5.47□□□□□ -1.53
APE4YHR113W YEL077W-AP0CX95 160 aa5.47□□□□□ -1.53
APE4YHR113W YGR296C-BP0CX96 160 aa5.47□□□□□ -1.53
APE4YHR113W YPL283W-BP0CX97 160 aa5.47□□□□□ -1.53
APE4YHR113W YPR204C-AP0CX98 160 aa5.47□□□□□ -1.53
APE4YHR113W YFL068WP0CX99 160 aa5.47□□□□□ -1.53
APE4YHR113W YLL066W-AP0CY00 160 aa5.47□□□□□ -1.53
APE4YHR113W YLL067W-AP0CY01 160 aa5.47□□□□□ -1.53
APE4YHR113W YKL102CP34249 101 aa5.47□□□□□ -1.53
APE4YHR113W QDR3P38227 689 aa5.47□□□□□ -1.53
APE4YHR113W ICS2P38284 255 aa5.47□□□□□ -1.53
APE4YHR113W DOG2P38773 246 aa5.47□□□□□ -1.53
APE4YHR113W DOG1P38774 246 aa5.47□□□□□ -1.53
APE4YHR113W YGR269WP40326 108 aa5.47□□□□□ -1.53
APE4YHR113W EMC5P40540 141 aa5.47□□□□□ -1.53
APE4YHR113W POM34Q12445 299 aa5.47□□□□□ -1.53
APE4YHR113W FMP16Q12497 93 aa5.47□□□□□ -1.53
APE4YHR113W YMR316C-AI2HB70 103 aa5.46□□□□□ -1.53
APE4YHR113W PIS1P06197 220 aaKnown RBP5.46□□□□□ -1.53
APE4YHR113W YCR025CP25352 136 aa5.46□□□□□ -1.53
APE4YHR113W PRY2P36110 329 aa5.46□□□□□ -1.53
APE4YHR113W MIC27P50945 234 aa5.46□□□□□ -1.53
APE4YHR113W PHO23P50947 330 aa5.46□□□□□ -1.53
APE4YHR113W YMR007WQ03675 126 aa5.46□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms