RNA–Protein interactions for RNA: YGL008C

PMA1, Transcript of Plasma membrane P2-type H+-ATPase, yeastyeast

Gene PMA1, Length 2,757 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PMA1YGL008C PSF1Q12488 208 aa4.32□□□□□ -1.72
PMA1YGL008C TMA19P35691 167 aaKnown RBP4.31□□□□□ -1.72
PMA1YGL008C YKR070WP36151 352 aaKnown RBP4.31□□□□□ -1.72
PMA1YGL008C COS8P38723 381 aa4.31□□□□□ -1.72
PMA1YGL008C IRC22P40006 225 aa4.31□□□□□ -1.72
PMA1YGL008C PGA1P53896 198 aa4.31□□□□□ -1.72
PMA1YGL008C SEN15Q04675 128 aa4.31□□□□□ -1.72
PMA1YGL008C PRP11Q07350 266 aaPredicted RBP4.31□□□□□ -1.72
PMA1YGL008C MCH1Q07376 486 aa4.31□□□□□ -1.72
PMA1YGL008C YHL026CP38740 315 aa4.31□□□□□ -1.72
PMA1YGL008C HTD2P38790 280 aaKnown RBP4.31□□□□□ -1.72
PMA1YGL008C COF1Q03048 143 aaKnown RBP4.31□□□□□ -1.72
PMA1YGL008C CGI121Q03705 181 aaKnown RBP4.31□□□□□ -1.72
PMA1YGL008C GLT1Q12680 2145 aaKnown RBP4.31□□□□□ -1.72
PMA1YGL008C ECM29P38737 1868 aa4.31□□□□□ -1.72
PMA1YGL008C YFR010W-AP0C5N0 62 aa4.31□□□□□ -1.72
PMA1YGL008C DDI2P0CH63 225 aa4.31□□□□□ -1.72
PMA1YGL008C DDI3P0CH64 225 aa4.31□□□□□ -1.72
PMA1YGL008C RPS20P38701 121 aaKnown RBP4.31□□□□□ -1.72
PMA1YGL008C GLR1P41921 483 aaKnown RBP4.31□□□□□ -1.72
PMA1YGL008C LCB3P47013 409 aa4.31□□□□□ -1.72
PMA1YGL008C SAE3P89114 91 aa4.31□□□□□ -1.72
PMA1YGL008C YPL245WQ12179 454 aaKnown RBP4.31□□□□□ -1.72
PMA1YGL008C MPD1Q12404 318 aaKnown RBP4.31□□□□□ -1.72
PMA1YGL008C YAL063C-AQ3E791 96 aa4.31□□□□□ -1.72
PMA1YGL008C REP2P03872 296 aa4.3□□□□□ -1.72
PMA1YGL008C LDS1P31379 325 aa4.3□□□□□ -1.72
PMA1YGL008C SRB6P32570 121 aa4.3□□□□□ -1.72
PMA1YGL008C TKL2P33315 681 aa4.3□□□□□ -1.72
PMA1YGL008C YRA2P36036 203 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
PMA1YGL008C MIX23P38162 196 aa4.3□□□□□ -1.72
PMA1YGL008C YIR035CP40579 254 aa4.3□□□□□ -1.72
PMA1YGL008C LSM8P47093 109 aaKnown RBP4.3□□□□□ -1.72
PMA1YGL008C YAE1P47118 141 aaPredicted RBP4.3□□□□□ -1.72
PMA1YGL008C COS10P52924 374 aa4.3□□□□□ -1.72
PMA1YGL008C YPL113CQ02961 396 aa4.3□□□□□ -1.72
PMA1YGL008C ZEO1Q08245 113 aa4.3□□□□□ -1.72
PMA1YGL008C ATG41Q12048 136 aa4.3□□□□□ -1.72
PMA1YGL008C YDL180WQ12301 547 aa4.3□□□□□ -1.72
PMA1YGL008C ATO3Q12359 275 aa4.3□□□□□ -1.72
PMA1YGL008C SIR2P06700 562 aa4.3□□□□□ -1.72
PMA1YGL008C STP22P25604 385 aa4.3□□□□□ -1.72
PMA1YGL008C TRS65P32893 560 aa4.3□□□□□ -1.72
PMA1YGL008C NSG1P38837 291 aa4.3□□□□□ -1.72
PMA1YGL008C AAH1P53909 347 aa4.3□□□□□ -1.72
PMA1YGL008C RAV2Q03956 351 aa4.3□□□□□ -1.72
PMA1YGL008C THI74Q04083 370 aa4.3□□□□□ -1.72
PMA1YGL008C YMR252CQ04814 134 aa4.3□□□□□ -1.72
PMA1YGL008C FSF1Q12029 327 aaKnown RBP4.3□□□□□ -1.72
PMA1YGL008C RPL15AP05748 204 aaKnown RBP4.29□□□□□ -1.72
PMA1YGL008C STE7P06784 515 aa4.29□□□□□ -1.72
PMA1YGL008C CAT5P41735 233 aa4.29□□□□□ -1.72
PMA1YGL008C RPL15BP54780 204 aaPredicted RBP4.29□□□□□ -1.72
PMA1YGL008C MRPS16Q02608 121 aa4.29□□□□□ -1.72
PMA1YGL008C SDH7Q04401 133 aa4.29□□□□□ -1.72
PMA1YGL008C YIR021W-AQ3E739 70 aa4.29□□□□□ -1.72
PMA1YGL008C VPS13Q07878 3144 aa4.29□□□□□ -1.72
PMA1YGL008C MSI1P13712 422 aa4.29□□□□□ -1.72
PMA1YGL008C RPL30P14120 105 aaKnown RBP4.29□□□□□ -1.72
PMA1YGL008C YNK1P36010 153 aaKnown RBP4.29□□□□□ -1.72
PMA1YGL008C MRPL24P36525 258 aaPredicted RBP4.29□□□□□ -1.72
PMA1YGL008C SHE1P38200 338 aa4.29□□□□□ -1.72
PMA1YGL008C AIM2P39721 246 aa4.29□□□□□ -1.72
PMA1YGL008C YNL200CP40165 246 aaKnown RBP4.29□□□□□ -1.72
PMA1YGL008C DIG2Q03373 323 aaKnown RBP4.29□□□□□ -1.72
PMA1YGL008C NMA1Q06178 401 aaKnown RBP4.29□□□□□ -1.72
PMA1YGL008C ATS1P31386 333 aa4.28□□□□□ -1.72
PMA1YGL008C CSE2P33308 149 aa4.28□□□□□ -1.72
PMA1YGL008C SHE2P36068 246 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
PMA1YGL008C YPL073CP40323 161 aa4.28□□□□□ -1.72
PMA1YGL008C FIP1P45976 327 aa4.28□□□□□ -1.72
PMA1YGL008C SDS23P53172 527 aa4.28□□□□□ -1.72
PMA1YGL008C CNL1Q06333 122 aa4.28□□□□□ -1.72
PMA1YGL008C PST1Q12355 444 aa4.28□□□□□ -1.72
PMA1YGL008C PAN3P36102 679 aaPredicted RBP4.28□□□□□ -1.72
PMA1YGL008C GTT1P40582 234 aa4.28□□□□□ -1.72
PMA1YGL008C HHO1P53551 258 aa4.28□□□□□ -1.72
PMA1YGL008C APS2Q00381 147 aa4.28□□□□□ -1.72
PMA1YGL008C TMA23Q03525 211 aa4.28□□□□□ -1.72
PMA1YGL008C BGL2P15703 313 aaKnown RBP4.27□□□□□ -1.73
PMA1YGL008C PCL1P24867 279 aa4.27□□□□□ -1.73
PMA1YGL008C POP8P38208 133 aa4.27□□□□□ -1.73
PMA1YGL008C MTC6P38849 526 aa4.27□□□□□ -1.73
PMA1YGL008C YFR054CP43622 192 aa4.27□□□□□ -1.73
PMA1YGL008C ADD37Q03233 198 aa4.27□□□□□ -1.73
PMA1YGL008C YEL073CP39974 107 aa4.27□□□□□ -1.73
PMA1YGL008C NRM1P53718 249 aa4.27□□□□□ -1.73
PMA1YGL008C VPS71Q03433 280 aa4.27□□□□□ -1.73
PMA1YGL008C YPR011CQ12251 326 aa4.27□□□□□ -1.73
PMA1YGL008C MBF1O14467 151 aaKnown RBP4.26□□□□□ -1.73
PMA1YGL008C OST1P41543 476 aaKnown RBP4.26□□□□□ -1.73
PMA1YGL008C GNA1P43577 159 aaPredicted RBP4.26□□□□□ -1.73
PMA1YGL008C YGR018CP53211 109 aa4.26□□□□□ -1.73
PMA1YGL008C ERP1Q05359 219 aaKnown RBP4.26□□□□□ -1.73
PMA1YGL008C TFC7Q12415 435 aa4.26□□□□□ -1.73
PMA1YGL008C Q0255P03881 472 aa4.26□□□□□ -1.73
PMA1YGL008C COQ2P32378 372 aa4.26□□□□□ -1.73
PMA1YGL008C PFS2P42841 465 aaKnown RBP4.26□□□□□ -1.73
PMA1YGL008C XPT1P47165 209 aa4.26□□□□□ -1.73
PMA1YGL008C TDA7P53882 636 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 47.2 ms