RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C RTC3P38804 111 aaPredicted RBP4.69□□□□□ -1.66
SEC20YDR498C YHR138CP38841 114 aaPredicted RBP4.69□□□□□ -1.66
SEC20YDR498C PGD1P40356 397 aa4.69□□□□□ -1.66
SEC20YDR498C LOC1P43586 204 aaPredicted RBP4.69□□□□□ -1.66
SEC20YDR498C TAX4P47030 604 aa4.69□□□□□ -1.66
SEC20YDR498C TIM21P53220 239 aa4.69□□□□□ -1.66
SEC20YDR498C YAP1802P53309 568 aa4.69□□□□□ -1.66
SEC20YDR498C YLR179CQ06252 201 aaKnown RBP4.69□□□□□ -1.66
SEC20YDR498C PRP11Q07350 266 aaPredicted RBP4.69□□□□□ -1.66
SEC20YDR498C YPD1Q07688 167 aa4.69□□□□□ -1.66
SEC20YDR498C ATP16Q12165 160 aa4.69□□□□□ -1.66
SEC20YDR498C YPS3Q12303 508 aa4.69□□□□□ -1.66
SEC20YDR498C YLR118CQ12354 227 aa4.69□□□□□ -1.66
SEC20YDR498C RPS25AQ3E792 108 aaPredicted RBP4.69□□□□□ -1.66
SEC20YDR498C APA2P22108 325 aa4.68□□□□□ -1.66
SEC20YDR498C RPS0AP32905 252 aaKnown RBP4.68□□□□□ -1.66
SEC20YDR498C MIA40P36046 403 aa4.68□□□□□ -1.66
SEC20YDR498C GET2P40056 285 aa4.68□□□□□ -1.66
SEC20YDR498C HXT14P42833 540 aa4.68□□□□□ -1.66
SEC20YDR498C SMD3P43321 101 aaKnown RBP4.68□□□□□ -1.66
SEC20YDR498C WWM1P43582 211 aaKnown RBP4.68□□□□□ -1.66
SEC20YDR498C RPL9BP51401 191 aaKnown RBP4.68□□□□□ -1.66
SEC20YDR498C PAU4P53427 120 aa4.68□□□□□ -1.66
SEC20YDR498C MIX17Q03667 156 aa4.68□□□□□ -1.66
SEC20YDR498C STP4Q07351 490 aa4.68□□□□□ -1.66
SEC20YDR498C TMC1Q08422 150 aaPredicted RBP4.68□□□□□ -1.66
SEC20YDR498C RAD28Q12021 506 aa4.68□□□□□ -1.66
SEC20YDR498C ATO3Q12359 275 aa4.68□□□□□ -1.66
SEC20YDR498C RAX2Q12465 1220 aa4.68□□□□□ -1.66
SEC20YDR498C YGL258W-AQ3E740 77 aa4.68□□□□□ -1.66
SEC20YDR498C YMR316C-AI2HB70 103 aa4.67□□□□□ -1.66
SEC20YDR498C PAU1P0CE88 120 aa4.67□□□□□ -1.66
SEC20YDR498C PAU14P0CE89 120 aa4.67□□□□□ -1.66
SEC20YDR498C PAU6P0CE90 120 aa4.67□□□□□ -1.66
SEC20YDR498C PAU18P0CE91 120 aa4.67□□□□□ -1.66
SEC20YDR498C PAU8P0CE92 120 aa4.67□□□□□ -1.66
SEC20YDR498C PAU11P0CE93 120 aa4.67□□□□□ -1.66
SEC20YDR498C NOP1P15646 327 aaKnown RBP4.67□□□□□ -1.66
SEC20YDR498C POF1P25576 258 aa4.67□□□□□ -1.66
SEC20YDR498C COQ3P27680 312 aa4.67□□□□□ -1.66
SEC20YDR498C LAC1P28496 418 aa4.67□□□□□ -1.66
SEC20YDR498C QDR3P38227 689 aa4.67□□□□□ -1.66
SEC20YDR498C PAU13P38725 120 aa4.67□□□□□ -1.66
SEC20YDR498C PTC7P38797 343 aa4.67□□□□□ -1.66
SEC20YDR498C PET100P38958 111 aa4.67□□□□□ -1.66
SEC20YDR498C SGN1P40561 250 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
SEC20YDR498C YJR015WP47090 510 aa4.67□□□□□ -1.66
SEC20YDR498C YNL092WP53934 400 aa4.67□□□□□ -1.66
SEC20YDR498C STD1Q02794 444 aa4.67□□□□□ -1.66
SEC20YDR498C PAU10Q03050 120 aa4.67□□□□□ -1.66
SEC20YDR498C TMA10Q06177 86 aa4.67□□□□□ -1.66
SEC20YDR498C PAU20Q08322 120 aa4.67□□□□□ -1.66
SEC20YDR498C PAU9Q3E770 120 aa4.67□□□□□ -1.66
SEC20YDR498C QCR9P22289 66 aa4.66□□□□□ -1.66
SEC20YDR498C POP5P28005 173 aa4.66□□□□□ -1.66
SEC20YDR498C SOR1P35497 357 aaKnown RBP4.66□□□□□ -1.66
SEC20YDR498C TRS20P38334 175 aa4.66□□□□□ -1.66
SEC20YDR498C YER121WP40076 114 aa4.66□□□□□ -1.66
SEC20YDR498C NSA2P40078 261 aaKnown RBP4.66□□□□□ -1.66
SEC20YDR498C GTT1P40582 234 aa4.66□□□□□ -1.66
SEC20YDR498C PAU15P40585 124 aa4.66□□□□□ -1.66
SEC20YDR498C RIB4P50861 169 aaPredicted RBP4.66□□□□□ -1.66
SEC20YDR498C YGR018CP53211 109 aa4.66□□□□□ -1.66
SEC20YDR498C BOR1P53838 576 aa4.66□□□□□ -1.66
SEC20YDR498C LRS4Q04087 347 aaKnown RBP4.66□□□□□ -1.66
SEC20YDR498C SOR2Q07786 357 aa4.66□□□□□ -1.66
SEC20YDR498C YDL009CQ12210 107 aa4.66□□□□□ -1.66
SEC20YDR498C SME1Q12330 94 aaPredicted RBP4.66□□□□□ -1.66
SEC20YDR498C DYN1P36022 4092 aa4.66□□□□□ -1.66
SEC20YDR498C PMU1P36069 295 aa4.65□□□□□ -1.67
SEC20YDR498C MRPS9P38120 278 aa4.65□□□□□ -1.67
SEC20YDR498C DER1P38307 211 aa4.65□□□□□ -1.67
SEC20YDR498C SDH8P38345 138 aa4.65□□□□□ -1.67
SEC20YDR498C YIL012WP40551 113 aa4.65□□□□□ -1.67
SEC20YDR498C NCA3P46955 337 aa4.65□□□□□ -1.67
SEC20YDR498C DSK2P48510 373 aa4.65□□□□□ -1.67
SEC20YDR498C FCY1Q12178 158 aa4.65□□□□□ -1.67
SEC20YDR498C HTB1P02293 131 aaKnown RBP4.64□□□□□ -1.67
SEC20YDR498C ADH3P07246 375 aaKnown RBP4.64□□□□□ -1.67
SEC20YDR498C TRP4P07285 380 aaPredicted RBP4.64□□□□□ -1.67
SEC20YDR498C BGL2P15703 313 aaKnown RBP4.64□□□□□ -1.67
SEC20YDR498C YCR022CP25620 114 aa4.64□□□□□ -1.67
SEC20YDR498C MRPL4P36517 319 aa4.64□□□□□ -1.67
SEC20YDR498C GPI18P38211 433 aa4.64□□□□□ -1.67
SEC20YDR498C YBR090CP38253 122 aa4.64□□□□□ -1.67
SEC20YDR498C YBR184WP38299 523 aa4.64□□□□□ -1.67
SEC20YDR498C RTS2P40962 232 aa4.64□□□□□ -1.67
SEC20YDR498C LST8P41318 303 aa4.64□□□□□ -1.67
SEC20YDR498C GZF3P42944 551 aaKnown RBP4.64□□□□□ -1.67
SEC20YDR498C HIT1P46973 164 aa4.64□□□□□ -1.67
SEC20YDR498C LST7P53237 242 aa4.64□□□□□ -1.67
SEC20YDR498C YNR064CP53750 290 aa4.64□□□□□ -1.67
SEC20YDR498C FYV6P53913 173 aa4.64□□□□□ -1.67
SEC20YDR498C SHH3Q04487 196 aa4.64□□□□□ -1.67
SEC20YDR498C POS5Q06892 414 aa4.64□□□□□ -1.67
SEC20YDR498C MCH1Q07376 486 aa4.64□□□□□ -1.67
SEC20YDR498C YPR071WQ12346 211 aa4.64□□□□□ -1.67
SEC20YDR498C PIS1P06197 220 aaKnown RBP4.63□□□□□ -1.67
SEC20YDR498C TOM40P23644 387 aaKnown RBP4.63□□□□□ -1.67
SEC20YDR498C IES6P32617 166 aa4.63□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 93.4 ms