RNA–Protein interactions for RNA: YDR246W

TRS23, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeast

Gene TRS23, Length 660 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS23	YDR246W	PCL7	P40186	285 aa		4.17	□□□□□ -1.74
TRS23	YDR246W	YGR269W	P40326	108 aa		4.17	□□□□□ -1.74
TRS23	YDR246W	PHB1	P40961	287 aa		4.17	□□□□□ -1.74
TRS23	YDR246W	RTS2	P40962	232 aa		4.17	□□□□□ -1.74
TRS23	YDR246W	SMD3	P43321	101 aa	Known RBP	4.17	□□□□□ -1.74
TRS23	YDR246W	XPT1	P47165	209 aa		4.17	□□□□□ -1.74
TRS23	YDR246W	MGA1	P53050	456 aa		4.17	□□□□□ -1.74
TRS23	YDR246W	CGR1	P53188	120 aa		4.17	□□□□□ -1.74
TRS23	YDR246W	YPL077C	Q02831	240 aa		4.17	□□□□□ -1.74
TRS23	YDR246W	YLR179C	Q06252	201 aa	Known RBP	4.17	□□□□□ -1.74
TRS23	YDR246W	YFH1	Q07540	174 aa		4.17	□□□□□ -1.74
TRS23	YDR246W	CDC7	P06243	507 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	PAU1	P0CE88	120 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	PAU14	P0CE89	120 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	PAU6	P0CE90	120 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	PAU18	P0CE91	120 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	PAU8	P0CE92	120 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	PAU11	P0CE93	120 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	LSB5	P25369	354 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	CUE1	P38428	203 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	PAU13	P38725	120 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	WSS1	P38838	269 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	YIP5	P53108	310 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	YGL114W	P53134	725 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	YGR050C	P53231	118 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	WSC2	P53832	503 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	HCH1	P53834	153 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	ARL3	Q02804	198 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	YDC1	Q02896	317 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	PAU10	Q03050	120 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	RSM10	Q03201	203 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	PAU20	Q08322	120 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	YPR063C	Q12160	140 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	ERV2	Q12284	196 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	RNH203	Q12338	110 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	RAX2	Q12465	1220 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	PAU9	Q3E770	120 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	BOL1	Q3E793	110 aa		4.16	□□□□□ -1.74
TRS23	YDR246W	RIP1	P08067	215 aa		4.15	□□□□□ -1.75
TRS23	YDR246W	URA5	P13298	226 aa	Known RBP	4.15	□□□□□ -1.75
TRS23	YDR246W	ROX3	P25046	220 aa		4.15	□□□□□ -1.75
TRS23	YDR246W	LDB16	P25587	256 aa		4.15	□□□□□ -1.75
TRS23	YDR246W	ALK2	P32789	676 aa	Predicted RBP	4.15	□□□□□ -1.75
TRS23	YDR246W	SSS1	P35179	80 aa		4.15	□□□□□ -1.75
TRS23	YDR246W	TRS20	P38334	175 aa		4.15	□□□□□ -1.75
TRS23	YDR246W	RTC3	P38804	111 aa	Predicted RBP	4.15	□□□□□ -1.75
TRS23	YDR246W	COX15	P40086	486 aa		4.15	□□□□□ -1.75
TRS23	YDR246W	LSM8	P47093	109 aa	Known RBP	4.15	□□□□□ -1.75
TRS23	YDR246W	ARP3	P47117	449 aa	Known RBP	4.15	□□□□□ -1.75
TRS23	YDR246W	TTI2	P47168	421 aa		4.15	□□□□□ -1.75
TRS23	YDR246W	SIP18	P50263	79 aa		4.15	□□□□□ -1.75
TRS23	YDR246W	YGL185C	P53100	379 aa		4.15	□□□□□ -1.75
TRS23	YDR246W	HSK3	P69852	69 aa		4.15	□□□□□ -1.75
TRS23	YDR246W	YDR114C	Q04597	100 aa		4.15	□□□□□ -1.75
TRS23	YDR246W	AVO2	Q04749	426 aa		4.15	□□□□□ -1.75
TRS23	YDR246W	PRP11	Q07350	266 aa	Predicted RBP	4.15	□□□□□ -1.75
TRS23	YDR246W	HRD1	Q08109	551 aa		4.15	□□□□□ -1.75
TRS23	YDR246W	CMC2	Q3E7A4	109 aa		4.15	□□□□□ -1.75
TRS23	YDR246W	SEN1	Q00416	2231 aa	Known RBP	4.15	□□□□□ -1.75
TRS23	YDR246W	RPS25B	P0C0T4	108 aa	Known RBP	4.14	□□□□□ -1.75
TRS23	YDR246W	RPL35A	P0CX84	120 aa	Known RBP	4.14	□□□□□ -1.75
TRS23	YDR246W	RPL35B	P0CX85	120 aa	Known RBP	4.14	□□□□□ -1.75
TRS23	YDR246W	BGL2	P15703	313 aa	Known RBP	4.14	□□□□□ -1.75
TRS23	YDR246W	FCY2	P17064	533 aa		4.14	□□□□□ -1.75
TRS23	YDR246W	QCR9	P22289	66 aa		4.14	□□□□□ -1.75
TRS23	YDR246W	YBL059W	P34224	193 aa		4.14	□□□□□ -1.75
TRS23	YDR246W	SHB17	P36136	271 aa	Known RBP	4.14	□□□□□ -1.75
TRS23	YDR246W	AVT5	P38176	459 aa		4.14	□□□□□ -1.75
TRS23	YDR246W	YEL057C	P39983	233 aa		4.14	□□□□□ -1.75
TRS23	YDR246W	LOC1	P43586	204 aa	Predicted RBP	4.14	□□□□□ -1.75
TRS23	YDR246W	GON7	P46984	123 aa		4.14	□□□□□ -1.75
TRS23	YDR246W	RIB4	P50861	169 aa	Predicted RBP	4.14	□□□□□ -1.75
TRS23	YDR246W	YMR007W	Q03675	126 aa		4.14	□□□□□ -1.75
TRS23	YDR246W	ECM18	Q04623	453 aa		4.14	□□□□□ -1.75
TRS23	YDR246W	SEN15	Q04675	128 aa		4.14	□□□□□ -1.75
TRS23	YDR246W	POC4	Q12245	148 aa	Predicted RBP	4.14	□□□□□ -1.75
TRS23	YDR246W	FOL3	Q12676	427 aa	Predicted RBP	4.14	□□□□□ -1.75
TRS23	YDR246W	LSO2	Q3E772	92 aa	Known RBP	4.14	□□□□□ -1.75
TRS23	YDR246W	RPS25A	Q3E792	108 aa	Predicted RBP	4.14	□□□□□ -1.75
TRS23	YDR246W	HEM4	P06174	275 aa		4.13	□□□□□ -1.75
TRS23	YDR246W	PET494	P07390	489 aa	Predicted RBP	4.13	□□□□□ -1.75
TRS23	YDR246W	YOX1	P34161	385 aa		4.13	□□□□□ -1.75
TRS23	YDR246W	MRPL28	P36527	147 aa		4.13	□□□□□ -1.75
TRS23	YDR246W	ATP3	P38077	311 aa	Known RBP	4.13	□□□□□ -1.75
TRS23	YDR246W	QDR3	P38227	689 aa		4.13	□□□□□ -1.75
TRS23	YDR246W	YMR262W	P38430	313 aa		4.13	□□□□□ -1.75
TRS23	YDR246W	DFG10	P40526	253 aa		4.13	□□□□□ -1.75
TRS23	YDR246W	PAU5	P43575	122 aa		4.13	□□□□□ -1.75
TRS23	YDR246W	HIT1	P46973	164 aa		4.13	□□□□□ -1.75
TRS23	YDR246W	UBC13	P52490	153 aa		4.13	□□□□□ -1.75
TRS23	YDR246W	YPL067C	Q02754	198 aa		4.13	□□□□□ -1.75
TRS23	YDR246W	PML1	Q07930	204 aa	Predicted RBP	4.13	□□□□□ -1.75
TRS23	YDR246W	RFM1	Q12192	310 aa		4.13	□□□□□ -1.75
TRS23	YDR246W	YLR302C	O13544	120 aa		4.12	□□□□□ -1.75
TRS23	YDR246W	PAU19	P0CE85	124 aa		4.12	□□□□□ -1.75
TRS23	YDR246W	PAU21	P0CE86	164 aa		4.12	□□□□□ -1.75
TRS23	YDR246W	PAU22	P0CE87	164 aa		4.12	□□□□□ -1.75
TRS23	YDR246W	NHP6A	P11632	93 aa	Known RBP	4.12	□□□□□ -1.75
TRS23	YDR246W	PAU3	P25610	124 aa		4.12	□□□□□ -1.75
TRS23	YDR246W	YHR138C	P38841	114 aa	Predicted RBP	4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms