RNA–Protein interactions for RNA: YDR087C

RRP1, Transcript of Essential evolutionarily conserved nucleolar protein, yeastyeast

Gene RRP1, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP1YDR087C HKR1P41809 1802 aa2.76□□□□□ -1.97
RRP1YDR087C UTP10P42945 1769 aaKnown RBP2.76□□□□□ -1.97
RRP1YDR087C LYS2P07702 1392 aa2.75□□□□□ -1.97
RRP1YDR087C CPA1P07258 411 aaKnown RBP2.75□□□□□ -1.97
RRP1YDR087C HMF1P40037 129 aaKnown RBP2.75□□□□□ -1.97
RRP1YDR087C GET1P53192 235 aa2.75□□□□□ -1.97
RRP1YDR087C YDR274CP87283 123 aa2.75□□□□□ -1.97
RRP1YDR087C UBR2Q07963 1872 aa2.74□□□□□ -1.97
RRP1YDR087C RPL40AP0CH08 128 aaKnown RBP2.74□□□□□ -1.97
RRP1YDR087C RPL40BP0CH09 128 aaKnown RBP2.74□□□□□ -1.97
RRP1YDR087C YBR285WP38354 144 aa2.74□□□□□ -1.97
RRP1YDR087C CGR1P53188 120 aa2.74□□□□□ -1.97
RRP1YDR087C POP3P53833 195 aaPredicted RBP2.74□□□□□ -1.97
RRP1YDR087C FLO1P32768 1537 aa2.73□□□□□ -1.97
RRP1YDR087C IKI3Q06706 1349 aaKnown RBP2.73□□□□□ -1.97
RRP1YDR087C RPL27AP0C2H6 136 aaKnown RBP2.73□□□□□ -1.97
RRP1YDR087C YOL162WP0CF19 215 aa2.73□□□□□ -1.97
RRP1YDR087C YKR045CP36138 183 aa2.73□□□□□ -1.97
RRP1YDR087C ATG40Q99325 256 aa2.73□□□□□ -1.97
RRP1YDR087C SIR2P06700 562 aa2.72□□□□□ -1.97
RRP1YDR087C CNB1P25296 175 aa2.72□□□□□ -1.97
RRP1YDR087C YGL010WP25338 174 aa2.72□□□□□ -1.97
RRP1YDR087C SHE2P36068 246 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
RRP1YDR087C YBR220CP38318 560 aa2.72□□□□□ -1.97
RRP1YDR087C UTP20P35194 2493 aaKnown RBP2.71□□□□□ -1.97
RRP1YDR087C MRS1P07266 363 aa2.71□□□□□ -1.98
RRP1YDR087C ASF2P32448 525 aaPredicted RBP2.71□□□□□ -1.98
RRP1YDR087C MMS2P53152 137 aa2.71□□□□□ -1.98
RRP1YDR087C ANT1Q06497 328 aa2.71□□□□□ -1.98
RRP1YDR087C CKS1P20486 150 aaKnown RBP2.7□□□□□ -1.98
RRP1YDR087C UPS2P35200 230 aa2.7□□□□□ -1.98
RRP1YDR087C VMA22P38784 181 aa2.7□□□□□ -1.98
RRP1YDR087C ACC1Q00955 2233 aaKnown RBP2.7□□□□□ -1.98
RRP1YDR087C YLR236CA0A023PZG4 107 aa2.69□□□□□ -1.98
RRP1YDR087C RPL2AP0CX45 254 aaKnown RBP2.69□□□□□ -1.98
RRP1YDR087C RPL2BP0CX46 254 aaKnown RBP2.69□□□□□ -1.98
RRP1YDR087C APA2P22108 325 aa2.69□□□□□ -1.98
RRP1YDR087C OCH1P31755 480 aa2.69□□□□□ -1.98
RRP1YDR087C YBR209WP38311 105 aa2.69□□□□□ -1.98
RRP1YDR087C KNH1P50112 268 aa2.69□□□□□ -1.98
RRP1YDR087C MPC3P53311 146 aa2.69□□□□□ -1.98
RRP1YDR087C HNT1Q04344 158 aaKnown RBP2.69□□□□□ -1.98
RRP1YDR087C YPK2P18961 677 aa2.68□□□□□ -1.98
RRP1YDR087C TMA19P35691 167 aaKnown RBP2.68□□□□□ -1.98
RRP1YDR087C KDX1P36005 433 aa2.68□□□□□ -1.98
RRP1YDR087C OPY1P38271 328 aa2.68□□□□□ -1.98
RRP1YDR087C RPL13BP40212 199 aaKnown RBP2.68□□□□□ -1.98
RRP1YDR087C RPL13AQ12690 199 aaPredicted RBP2.68□□□□□ -1.98
RRP1YDR087C PRP8P33334 2413 aaKnown RBP2.68□□□□□ -1.98
RRP1YDR087C ERJ5P43613 295 aaPredicted RBP2.67□□□□□ -1.98
RRP1YDR087C SAY1P53324 424 aa2.67□□□□□ -1.98
RRP1YDR087C CYR1P08678 2026 aaKnown RBP2.67□□□□□ -1.98
RRP1YDR087C TFC1P32367 649 aa2.66□□□□□ -1.98
RRP1YDR087C ARO80Q04052 950 aa2.66□□□□□ -1.98
RRP1YDR087C MBF1O14467 151 aaKnown RBP2.65□□□□□ -1.99
RRP1YDR087C ADE1P27616 306 aa2.65□□□□□ -1.99
RRP1YDR087C ARP3P47117 449 aaKnown RBP2.65□□□□□ -1.99
RRP1YDR087C ODC2Q99297 307 aa2.65□□□□□ -1.99
RRP1YDR087C SKI6P46948 246 aaPredicted RBP2.64□□□□□ -1.99
RRP1YDR087C POR1P04840 283 aaKnown RBP2.63□□□□□ -1.99
RRP1YDR087C YEA4P40004 342 aa2.63□□□□□ -1.99
RRP1YDR087C UBC12P52491 188 aa2.63□□□□□ -1.99
RRP1YDR087C YNL184CP53876 108 aa2.63□□□□□ -1.99
RRP1YDR087C NUP49Q02199 472 aa2.63□□□□□ -1.99
RRP1YDR087C SEC11P15367 167 aa2.62□□□□□ -1.99
RRP1YDR087C SPO13P23624 291 aa2.62□□□□□ -1.99
RRP1YDR087C PAN3P36102 679 aaPredicted RBP2.62□□□□□ -1.99
RRP1YDR087C RIO1Q12196 484 aaKnown RBP2.62□□□□□ -1.99
RRP1YDR087C ECM29P38737 1868 aa2.62□□□□□ -1.99
RRP1YDR087C GPA2P10823 449 aa2.61□□□□□ -1.99
RRP1YDR087C FPR1P20081 114 aaKnown RBP2.61□□□□□ -1.99
RRP1YDR087C YCR090CP25654 182 aaKnown RBP2.61□□□□□ -1.99
RRP1YDR087C YER034WP40022 185 aaKnown RBP2.61□□□□□ -1.99
RRP1YDR087C SER2P42941 309 aa2.61□□□□□ -1.99
RRP1YDR087C RAD28Q12021 506 aa2.61□□□□□ -1.99
RRP1YDR087C FMP23P38231 175 aa2.6□□□□□ -1.99
RRP1YDR087C YJR111CP47148 283 aaKnown RBP2.6□□□□□ -1.99
RRP1YDR087C CUE4Q04201 117 aaPredicted RBP2.6□□□□□ -1.99
RRP1YDR087C YDR524C-BQ3E6R4 66 aa2.6□□□□□ -1.99
RRP1YDR087C CSF1Q12150 2958 aa2.6□□□□□ -1.99
RRP1YDR087C ARO8P53090 500 aaKnown RBP2.59□□□□□ -1.99
RRP1YDR087C MZM1Q03429 123 aaPredicted RBP2.59□□□□□ -1.99
RRP1YDR087C FUS2Q05670 677 aa2.59□□□□□ -1.99
RRP1YDR087C DGA1Q08650 418 aa2.59□□□□□ -1.99
RRP1YDR087C IGO2Q9P305 131 aa2.59□□□□□ -1.99
RRP1YDR087C QCR8P08525 94 aa2.58□□□□□ -2
RRP1YDR087C YAR023CD6VPM8 179 aa2.56□□□□□ -2
RRP1YDR087C YMR099CQ03161 297 aaKnown RBP2.56□□□□□ -2
RRP1YDR087C NAT3Q06504 195 aa2.56□□□□□ -2
RRP1YDR087C YOL014WQ08110 124 aa2.56□□□□□ -2
RRP1YDR087C YDL180WQ12301 547 aa2.56□□□□□ -2
RRP1YDR087C PDS1P40316 373 aaPredicted RBP2.55□□□□□ -2
RRP1YDR087C DYN3Q04949 312 aa2.55□□□□□ -2
RRP1YDR087C YOL024WQ08172 172 aa2.55□□□□□ -2
RRP1YDR087C AIM2P39721 246 aa2.54□□□□□ -2
RRP1YDR087C YER076CP40049 302 aa2.54□□□□□ -2
RRP1YDR087C YER134CP40081 178 aa2.54□□□□□ -2
RRP1YDR087C SNF4P12904 322 aa2.53□□□□□ -2
RRP1YDR087C PHO85P17157 305 aa2.53□□□□□ -2
RRP1YDR087C TVP38P36164 337 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms