RNA–Protein interactions for RNA: YDL223C

HBT1, Transcript of Shmoo tip protein, substrate of Hub1p ubiquitin-like protein, yeastyeast

Gene HBT1, Length 3,141 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HBT1YDL223C IES3Q12345 250 aa2.32□□□□□ -2.04
HBT1YDL223C RPL27AP0C2H6 136 aaKnown RBP2.32□□□□□ -2.04
HBT1YDL223C RPL27BP0C2H7 136 aaKnown RBP2.32□□□□□ -2.04
HBT1YDL223C STF2P16965 84 aa2.32□□□□□ -2.04
HBT1YDL223C RCN1P36054 211 aa2.32□□□□□ -2.04
HBT1YDL223C YER084WP40057 128 aa2.32□□□□□ -2.04
HBT1YDL223C PRE6P40303 254 aaKnown RBP2.32□□□□□ -2.04
HBT1YDL223C GPI11Q06636 219 aa2.32□□□□□ -2.04
HBT1YDL223C GEP5Q12393 293 aa2.32□□□□□ -2.04
HBT1YDL223C YBL008W-AQ3E821 79 aa2.32□□□□□ -2.04
HBT1YDL223C BLM10P43583 2143 aa2.32□□□□□ -2.04
HBT1YDL223C TRM5P38793 499 aa2.31□□□□□ -2.04
HBT1YDL223C SIP18P50263 79 aa2.31□□□□□ -2.04
HBT1YDL223C NSA1P53136 463 aaPredicted RBP2.31□□□□□ -2.04
HBT1YDL223C YNR062CP53748 327 aa2.31□□□□□ -2.04
HBT1YDL223C HEM25Q07534 307 aa2.31□□□□□ -2.04
HBT1YDL223C MHF2Q3E829 80 aa2.31□□□□□ -2.04
HBT1YDL223C YAK1P14680 807 aa2.31□□□□□ -2.04
HBT1YDL223C PET9P18239 318 aaKnown RBP2.31□□□□□ -2.04
HBT1YDL223C UTP11P34247 250 aaPredicted RBP2.31□□□□□ -2.04
HBT1YDL223C SKG1P36169 355 aa2.31□□□□□ -2.04
HBT1YDL223C GET1P53192 235 aa2.31□□□□□ -2.04
HBT1YDL223C SMD1Q02260 146 aaPredicted RBP2.31□□□□□ -2.04
HBT1YDL223C USB1Q12208 290 aaKnown RBP2.31□□□□□ -2.04
HBT1YDL223C YHR214C-EQ8TGK0 99 aa2.31□□□□□ -2.04
HBT1YDL223C TOM40P23644 387 aaKnown RBP2.31□□□□□ -2.04
HBT1YDL223C BAT2P47176 376 aaKnown RBP2.31□□□□□ -2.04
HBT1YDL223C SED1Q01589 338 aa2.31□□□□□ -2.04
HBT1YDL223C YOL162WP0CF19 215 aa2.3□□□□□ -2.04
HBT1YDL223C MSA2P36157 363 aa2.3□□□□□ -2.04
HBT1YDL223C YHL044WP38727 235 aa2.3□□□□□ -2.04
HBT1YDL223C MRPL49P40858 161 aaPredicted RBP2.3□□□□□ -2.04
HBT1YDL223C YDR102CQ03864 110 aa2.3□□□□□ -2.04
HBT1YDL223C SYC1Q08553 188 aaPredicted RBP2.3□□□□□ -2.04
HBT1YDL223C YPL264CQ08980 353 aa2.3□□□□□ -2.04
HBT1YDL223C YOX1P34161 385 aa2.3□□□□□ -2.04
HBT1YDL223C YKE4P40544 346 aa2.3□□□□□ -2.04
HBT1YDL223C YIR020CP40575 100 aa2.3□□□□□ -2.04
HBT1YDL223C BRR6P53062 197 aa2.3□□□□□ -2.04
HBT1YDL223C SLX9P53251 210 aaPredicted RBP2.3□□□□□ -2.04
HBT1YDL223C TMA20P89886 181 aaPredicted RBP2.3□□□□□ -2.04
HBT1YDL223C DML1Q03652 475 aa2.3□□□□□ -2.04
HBT1YDL223C YML108WQ03759 105 aa2.3□□□□□ -2.04
HBT1YDL223C HRT1Q08273 121 aa2.3□□□□□ -2.04
HBT1YDL223C GRX2P17695 143 aaKnown RBP2.29□□□□□ -2.04
HBT1YDL223C ECM14P38836 430 aa2.29□□□□□ -2.04
HBT1YDL223C SBH2P52871 88 aa2.29□□□□□ -2.04
HBT1YDL223C JAC1P53193 184 aa2.29□□□□□ -2.04
HBT1YDL223C PDR17P53844 350 aa2.29□□□□□ -2.04
HBT1YDL223C FYV6P53913 173 aa2.29□□□□□ -2.04
HBT1YDL223C YDC1Q02896 317 aa2.29□□□□□ -2.04
HBT1YDL223C ARR2Q06597 130 aa2.29□□□□□ -2.04
HBT1YDL223C FIT3Q08907 204 aa2.29□□□□□ -2.04
HBT1YDL223C CPT1P17898 393 aa2.29□□□□□ -2.04
HBT1YDL223C MDH3P32419 343 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
HBT1YDL223C POG1P40473 351 aa2.29□□□□□ -2.04
HBT1YDL223C ERV29P53337 310 aa2.29□□□□□ -2.04
HBT1YDL223C NNT1Q05874 261 aa2.29□□□□□ -2.04
HBT1YDL223C SPC3Q12133 184 aa2.29□□□□□ -2.04
HBT1YDL223C CCW14O13547 238 aa2.28□□□□□ -2.04
HBT1YDL223C TIM9O74700 87 aa2.28□□□□□ -2.04
HBT1YDL223C DPM1P14020 267 aaKnown RBP2.28□□□□□ -2.04
HBT1YDL223C CLB6P32943 380 aa2.28□□□□□ -2.04
HBT1YDL223C YKR041WP36134 250 aa2.28□□□□□ -2.04
HBT1YDL223C YBR063CP38083 404 aa2.28□□□□□ -2.04
HBT1YDL223C FCY21P40039 528 aa2.28□□□□□ -2.04
HBT1YDL223C PDS1P40316 373 aaPredicted RBP2.28□□□□□ -2.04
HBT1YDL223C GPI17Q04080 534 aa2.28□□□□□ -2.04
HBT1YDL223C PEX12Q04370 399 aa2.28□□□□□ -2.04
HBT1YDL223C RTR2Q12378 196 aa2.28□□□□□ -2.04
HBT1YDL223C RPS23AP0CX29 145 aaKnown RBP2.28□□□□□ -2.04
HBT1YDL223C RPS23BP0CX30 145 aa2.28□□□□□ -2.04
HBT1YDL223C SEC22P22214 214 aa2.28□□□□□ -2.04
HBT1YDL223C TFC1P32367 649 aa2.28□□□□□ -2.04
HBT1YDL223C CAT5P41735 233 aa2.28□□□□□ -2.04
HBT1YDL223C VMA10P48836 114 aaKnown RBP2.28□□□□□ -2.04
HBT1YDL223C YMR279CQ03263 540 aa2.28□□□□□ -2.04
HBT1YDL223C YDR391CQ04170 232 aa2.28□□□□□ -2.04
HBT1YDL223C SPC2Q04969 178 aa2.28□□□□□ -2.04
HBT1YDL223C PFS2P42841 465 aaKnown RBP2.28□□□□□ -2.04
HBT1YDL223C IRC18P47056 224 aa2.28□□□□□ -2.04
HBT1YDL223C BXI1P48558 297 aa2.28□□□□□ -2.04
HBT1YDL223C SNF6P18888 332 aa2.27□□□□□ -2.05
HBT1YDL223C GLR1P41921 483 aaKnown RBP2.27□□□□□ -2.05
HBT1YDL223C YGL159WP53110 370 aa2.27□□□□□ -2.05
HBT1YDL223C YGL101WP53144 215 aa2.27□□□□□ -2.05
HBT1YDL223C SNO1Q03144 224 aa2.27□□□□□ -2.05
HBT1YDL223C PLP1Q04004 230 aa2.27□□□□□ -2.05
HBT1YDL223C PRR2Q12310 699 aa2.27□□□□□ -2.05
HBT1YDL223C GCN3P14741 305 aa2.27□□□□□ -2.05
HBT1YDL223C UBC8P28263 218 aa2.27□□□□□ -2.05
HBT1YDL223C CLG1P35190 452 aa2.27□□□□□ -2.05
HBT1YDL223C PDX3P38075 228 aaKnown RBP2.27□□□□□ -2.05
HBT1YDL223C SUR2P38992 349 aa2.27□□□□□ -2.05
HBT1YDL223C SEC72P39742 193 aaKnown RBP2.27□□□□□ -2.05
HBT1YDL223C RPA43P46669 326 aa2.27□□□□□ -2.05
HBT1YDL223C FCF1Q05498 189 aaPredicted RBP2.27□□□□□ -2.05
HBT1YDL223C BPH1P25356 2167 aa2.26□□□□□ -2.05
HBT1YDL223C AME1P38313 324 aa2.26□□□□□ -2.05
HBT1YDL223C YBR242WP38331 238 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms