RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	BRR6	P53062	197 aa		3.46	□□□□□ -1.85
SIR2	YDL042C	MRPS17	Q03246	237 aa	Predicted RBP	3.46	□□□□□ -1.85
SIR2	YDL042C	YOR283W	Q12040	230 aa	Known RBP	3.46	□□□□□ -1.85
SIR2	YDL042C	YOR062C	P36025	268 aa		3.46	□□□□□ -1.86
SIR2	YDL042C	ECM33	P38248	429 aa	Known RBP	3.46	□□□□□ -1.86
SIR2	YDL042C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.46	□□□□□ -1.86	not detected
SIR2	YDL042C	AIM2	P39721	246 aa		3.46	□□□□□ -1.86
SIR2	YDL042C	CUP9	P41817	306 aa		3.46	□□□□□ -1.86
SIR2	YDL042C	ALB1	P47019	175 aa	Predicted RBP	3.46	□□□□□ -1.86
SIR2	YDL042C	NUP57	P48837	541 aa		3.46	□□□□□ -1.86
SIR2	YDL042C	GGA1	Q06336	557 aa		3.46	□□□□□ -1.86
SIR2	YDL042C	YPR202W	Q08993	238 aa		3.46	□□□□□ -1.86
SIR2	YDL042C	RGI1	P40043	161 aa	Predicted RBP	3.45	□□□□□ -1.86
SIR2	YDL042C	YNL194C	P40169	301 aa		3.45	□□□□□ -1.86
SIR2	YDL042C	YRB2	P40517	327 aa		3.45	□□□□□ -1.86
SIR2	YDL042C	YMD8	Q03697	442 aa		3.45	□□□□□ -1.86
SIR2	YDL042C	NSL1	Q12143	216 aa		3.45	□□□□□ -1.86
SIR2	YDL042C	CDC36	P06100	191 aa	Predicted RBP	3.44	□□□□□ -1.86
SIR2	YDL042C	ACP1	P32463	125 aa		3.44	□□□□□ -1.86
SIR2	YDL042C	HPM1	P40481	377 aa		3.44	□□□□□ -1.86
SIR2	YDL042C	TMA22	P47089	198 aa	Predicted RBP	3.44	□□□□□ -1.86
SIR2	YDL042C	MPA43	P53583	542 aa	Predicted RBP	3.44	□□□□□ -1.86
SIR2	YDL042C	PRM15	Q03262	622 aa		3.44	□□□□□ -1.86
SIR2	YDL042C	LSO2	Q3E772	92 aa	Known RBP	3.44	□□□□□ -1.86
SIR2	YDL042C	CDC28	P00546	298 aa	Known RBP	3.43	□□□□□ -1.86
SIR2	YDL042C	RPL9A	P05738	191 aa	Known RBP	3.43	□□□□□ -1.86
SIR2	YDL042C	FES1	P38260	290 aa		3.43	□□□□□ -1.86
SIR2	YDL042C	DAN1	P47178	298 aa		3.43	□□□□□ -1.86
SIR2	YDL042C	PAC10	P48363	199 aa		3.43	□□□□□ -1.86
SIR2	YDL042C	RPL9B	P51401	191 aa	Known RBP	3.43	□□□□□ -1.86
SIR2	YDL042C	DID2	P69771	204 aa		3.43	□□□□□ -1.86
SIR2	YDL042C	BNA7	Q04066	261 aa		3.43	□□□□□ -1.86
SIR2	YDL042C	DYN3	Q04949	312 aa		3.43	□□□□□ -1.86
SIR2	YDL042C	MTW1	P39731	289 aa		3.43	□□□□□ -1.86
SIR2	YDL042C	PHB1	P40961	287 aa		3.43	□□□□□ -1.86
SIR2	YDL042C	ADO1	P47143	340 aa	Known RBP	3.43	□□□□□ -1.86
SIR2	YDL042C	BXI1	P48558	297 aa		3.43	□□□□□ -1.86
SIR2	YDL042C	YDR476C	Q03362	224 aa		3.43	□□□□□ -1.86
SIR2	YDL042C	YLR036C	Q07986	203 aa		3.43	□□□□□ -1.86
SIR2	YDL042C	YSF3	P0C074	85 aa	Predicted RBP	3.42	□□□□□ -1.86
SIR2	YDL042C	RPS1B	P23248	255 aa	Known RBP	3.42	□□□□□ -1.86
SIR2	YDL042C	DOG2	P38773	246 aa		3.42	□□□□□ -1.86
SIR2	YDL042C	DOG1	P38774	246 aa		3.42	□□□□□ -1.86
SIR2	YDL042C	TRM5	P38793	499 aa		3.42	□□□□□ -1.86
SIR2	YDL042C	APS3	P47064	194 aa		3.42	□□□□□ -1.86
SIR2	YDL042C	MGA1	P53050	456 aa		3.42	□□□□□ -1.86
SIR2	YDL042C	SPC24	Q04477	213 aa		3.42	□□□□□ -1.86
SIR2	YDL042C	YOR342C	Q12182	319 aa		3.42	□□□□□ -1.86
SIR2	YDL042C	ATO3	Q12359	275 aa		3.42	□□□□□ -1.86
SIR2	YDL042C	YOR032W-A	Q8TGS1	66 aa		3.42	□□□□□ -1.86
SIR2	YDL042C	GRX2	P17695	143 aa	Known RBP	3.41	□□□□□ -1.86
SIR2	YDL042C	DBF2	P22204	572 aa		3.41	□□□□□ -1.86
SIR2	YDL042C	LHP1	P33399	275 aa	Known RBP	3.41	□□□□□ -1.86
SIR2	YDL042C	RPS12	P48589	143 aa	Known RBP	3.41	□□□□□ -1.86
SIR2	YDL042C	CWC23	P52868	283 aa	Predicted RBP	3.41	□□□□□ -1.86
SIR2	YDL042C	YNL033W	P53964	284 aa		3.41	□□□□□ -1.86
SIR2	YDL042C	YNL019C	P53975	284 aa		3.41	□□□□□ -1.86
SIR2	YDL042C	YLR460C	P54007	376 aa		3.41	□□□□□ -1.86
SIR2	YDL042C	NCE101	Q02820	53 aa		3.41	□□□□□ -1.86
SIR2	YDL042C	YDR248C	Q03786	193 aa		3.41	□□□□□ -1.86
SIR2	YDL042C	MDM32	Q12171	622 aa		3.41	□□□□□ -1.86
SIR2	YDL042C	MSW1	P04803	379 aa		3.4	□□□□□ -1.86
SIR2	YDL042C	YPR170W-B	P0C5R9	85 aa		3.4	□□□□□ -1.86
SIR2	YDL042C	RPL43A	P0CX25	92 aa	Known RBP	3.4	□□□□□ -1.86
SIR2	YDL042C	RPL43B	P0CX26	92 aa		3.4	□□□□□ -1.86
SIR2	YDL042C	ATP7	P30902	174 aa		3.4	□□□□□ -1.86
SIR2	YDL042C	SKG1	P36169	355 aa		3.4	□□□□□ -1.86
SIR2	YDL042C	IRC22	P40006	225 aa		3.4	□□□□□ -1.86
SIR2	YDL042C	MPM1	P40364	252 aa		3.4	□□□□□ -1.86
SIR2	YDL042C	SWP1	Q02795	286 aa		3.4	□□□□□ -1.86
SIR2	YDL042C	CMC2	Q3E7A4	109 aa		3.4	□□□□□ -1.86
SIR2	YDL042C	YDR157W	A0A023PZE8	133 aa		3.39	□□□□□ -1.87
SIR2	YDL042C	HSP150	P32478	413 aa		3.39	□□□□□ -1.87
SIR2	YDL042C	VPS51	P36116	164 aa		3.39	□□□□□ -1.87
SIR2	YDL042C	PRM8	P53174	237 aa		3.39	□□□□□ -1.87
SIR2	YDL042C	GET1	P53192	235 aa		3.39	□□□□□ -1.87
SIR2	YDL042C	PSF1	Q12488	208 aa		3.39	□□□□□ -1.87
SIR2	YDL042C	LPP1	Q04396	274 aa		3.39	□□□□□ -1.87
SIR2	YDL042C	ARR2	Q06597	130 aa		3.39	□□□□□ -1.87
SIR2	YDL042C	YPK2	P18961	677 aa		3.38	□□□□□ -1.87
SIR2	YDL042C	OAC1	P32332	324 aa		3.38	□□□□□ -1.87
SIR2	YDL042C	TFC1	P32367	649 aa		3.38	□□□□□ -1.87
SIR2	YDL042C	NSG1	P38837	291 aa		3.38	□□□□□ -1.87
SIR2	YDL042C	YGR201C	P42936	225 aa		3.38	□□□□□ -1.87
SIR2	YDL042C	FAR7	P43592	221 aa		3.38	□□□□□ -1.87
SIR2	YDL042C	YFR054C	P43622	192 aa		3.38	□□□□□ -1.87
SIR2	YDL042C	GPI11	Q06636	219 aa		3.38	□□□□□ -1.87
SIR2	YDL042C	FLO9	P39712	1322 aa		3.38	□□□□□ -1.87
SIR2	YDL042C	NRG2	P38082	220 aa		3.37	□□□□□ -1.87
SIR2	YDL042C	IRC18	P47056	224 aa		3.37	□□□□□ -1.87
SIR2	YDL042C	YJL027C	P47063	138 aa	Predicted RBP	3.37	□□□□□ -1.87
SIR2	YDL042C	YGR219W	P53307	113 aa		3.37	□□□□□ -1.87
SIR2	YDL042C	GRE1	Q08969	168 aa		3.37	□□□□□ -1.87
SIR2	YDL042C	MHF2	Q3E829	80 aa		3.37	□□□□□ -1.87
SIR2	YDL042C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.36	□□□□□ -1.87	not detected
SIR2	YDL042C	APS1	P35181	156 aa		3.36	□□□□□ -1.87
SIR2	YDL042C	PDX3	P38075	228 aa	Known RBP	3.36	□□□□□ -1.87
SIR2	YDL042C	AST2	P39945	430 aa	Known RBP	3.36	□□□□□ -1.87
SIR2	YDL042C	SOK1	P40317	901 aa		3.36	□□□□□ -1.87
SIR2	YDL042C	MPC1	P53157	130 aa	Known RBP	3.36	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms