RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	RAD28	Q12021	506 aa		4.54	□□□□□ -1.68
ATG12	YBR217W	YPS3	Q12303	508 aa		4.54	□□□□□ -1.68
ATG12	YBR217W	TDH1	P00360	332 aa	Known RBP	4.53	□□□□□ -1.68
ATG12	YBR217W	YCR025C	P25352	136 aa		4.53	□□□□□ -1.68
ATG12	YBR217W	CDS1	P38221	457 aa		4.53	□□□□□ -1.68
ATG12	YBR217W	MIC12	P38341	106 aa		4.53	□□□□□ -1.68
ATG12	YBR217W	RTC3	P38804	111 aa	Predicted RBP	4.53	□□□□□ -1.68
ATG12	YBR217W	HXT14	P42833	540 aa		4.53	□□□□□ -1.68
ATG12	YBR217W	AGX1	P43567	385 aa		4.53	□□□□□ -1.68
ATG12	YBR217W	TIM44	Q01852	431 aa		4.53	□□□□□ -1.68
ATG12	YBR217W	YMR082C	Q04276	118 aa		4.53	□□□□□ -1.68
ATG12	YBR217W	POS5	Q06892	414 aa		4.53	□□□□□ -1.68
ATG12	YBR217W	PAA1	Q12447	191 aa	Known RBP	4.53	□□□□□ -1.68
ATG12	YBR217W	YGL194C-A	Q2V2P6	80 aa		4.53	□□□□□ -1.68
ATG12	YBR217W	ISN1	Q99312	450 aa		4.53	□□□□□ -1.68
ATG12	YBR217W	RPS25B	P0C0T4	108 aa	Known RBP	4.52	□□□□□ -1.69
ATG12	YBR217W	MSN1	P22148	382 aa		4.52	□□□□□ -1.69
ATG12	YBR217W	YBR144C	P34215	104 aa		4.52	□□□□□ -1.69
ATG12	YBR217W	YBL071C	P38185	102 aa		4.52	□□□□□ -1.69
ATG12	YBR217W	QDR3	P38227	689 aa		4.52	□□□□□ -1.69
ATG12	YBR217W	SNU13	P39990	126 aa	Known RBP	4.52	□□□□□ -1.69
ATG12	YBR217W	MRPL49	P40858	161 aa	Predicted RBP	4.52	□□□□□ -1.69
ATG12	YBR217W	TAD2	P47058	250 aa		4.52	□□□□□ -1.69
ATG12	YBR217W	BUL1	P48524	976 aa		4.52	□□□□□ -1.69
ATG12	YBR217W	YGR018C	P53211	109 aa		4.52	□□□□□ -1.69
ATG12	YBR217W	ISU1	Q03020	165 aa		4.52	□□□□□ -1.69
ATG12	YBR217W	YOR352W	Q08816	343 aa		4.52	□□□□□ -1.69
ATG12	YBR217W	POM34	Q12445	299 aa		4.52	□□□□□ -1.69
ATG12	YBR217W	RPS25A	Q3E792	108 aa	Predicted RBP	4.52	□□□□□ -1.69
ATG12	YBR217W	YHR213W-A	Q8TGT4	77 aa		4.52	□□□□□ -1.69
ATG12	YBR217W	CYC3	P06182	269 aa		4.51	□□□□□ -1.69
ATG12	YBR217W	GCN3	P14741	305 aa		4.51	□□□□□ -1.69
ATG12	YBR217W	MAG1	P22134	296 aa	Known RBP	4.51	□□□□□ -1.69
ATG12	YBR217W	YCR022C	P25620	114 aa		4.51	□□□□□ -1.69
ATG12	YBR217W	UPS2	P35200	230 aa		4.51	□□□□□ -1.69
ATG12	YBR217W	RRT1	P38192	103 aa		4.51	□□□□□ -1.69
ATG12	YBR217W	BDH1	P39714	382 aa		4.51	□□□□□ -1.69
ATG12	YBR217W	YJR015W	P47090	510 aa		4.51	□□□□□ -1.69
ATG12	YBR217W	YGL117W	P53133	265 aa		4.51	□□□□□ -1.69
ATG12	YBR217W	CAX4	P53223	239 aa		4.51	□□□□□ -1.69
ATG12	YBR217W	NCE103	P53615	221 aa		4.51	□□□□□ -1.69
ATG12	YBR217W	BER1	Q06688	274 aa	Known RBP	4.51	□□□□□ -1.69
ATG12	YBR217W	YLR125W	Q12138	136 aa		4.51	□□□□□ -1.69
ATG12	YBR217W	YPR013C	Q12145	317 aa		4.51	□□□□□ -1.69
ATG12	YBR217W	PRR2	Q12310	699 aa		4.51	□□□□□ -1.69
ATG12	YBR217W	YLR122C	Q12312	125 aa		4.51	□□□□□ -1.69
ATG12	YBR217W	YMR316C-A	I2HB70	103 aa		4.5	□□□□□ -1.69
ATG12	YBR217W	PIS1	P06197	220 aa	Known RBP	4.5	□□□□□ -1.69
ATG12	YBR217W	MDM10	P18409	493 aa		4.5	□□□□□ -1.69
ATG12	YBR217W	AVT5	P38176	459 aa		4.5	□□□□□ -1.69
ATG12	YBR217W	YEA4	P40004	342 aa		4.5	□□□□□ -1.69
ATG12	YBR217W	YNL194C	P40169	301 aa		4.5	□□□□□ -1.69
ATG12	YBR217W	YGR269W	P40326	108 aa		4.5	□□□□□ -1.69
ATG12	YBR217W	LST7	P53237	242 aa		4.5	□□□□□ -1.69
ATG12	YBR217W	YAP1802	P53309	568 aa		4.5	□□□□□ -1.69
ATG12	YBR217W	ARR3	Q06598	404 aa		4.5	□□□□□ -1.69
ATG12	YBR217W	FCF2	Q12035	217 aa	Predicted RBP	4.5	□□□□□ -1.69
ATG12	YBR217W	AGC1	Q12482	902 aa		4.5	□□□□□ -1.69
ATG12	YBR217W	ELO2	P25358	347 aa		4.49	□□□□□ -1.69
ATG12	YBR217W	FPR2	P32472	135 aa		4.49	□□□□□ -1.69
ATG12	YBR217W	UTR5	P32630	166 aa		4.49	□□□□□ -1.69
ATG12	YBR217W	CSH1	P38287	376 aa		4.49	□□□□□ -1.69
ATG12	YBR217W	YPI1	P43587	155 aa		4.49	□□□□□ -1.69
ATG12	YBR217W	TDA6	Q06466	467 aa		4.49	□□□□□ -1.69
ATG12	YBR217W	ANT1	Q06497	328 aa		4.49	□□□□□ -1.69
ATG12	YBR217W	TIM18	Q08749	192 aa		4.49	□□□□□ -1.69
ATG12	YBR217W	YHR213W	P0CI67	198 aa		4.48	□□□□□ -1.69
ATG12	YBR217W	ALK2	P32789	676 aa	Predicted RBP	4.48	□□□□□ -1.69
ATG12	YBR217W	SHB17	P36136	271 aa	Known RBP	4.48	□□□□□ -1.69
ATG12	YBR217W	ECM33	P38248	429 aa	Known RBP	4.48	□□□□□ -1.69
ATG12	YBR217W	SWM2	P40342	146 aa		4.48	□□□□□ -1.69
ATG12	YBR217W	CAF16	P43569	289 aa		4.48	□□□□□ -1.69
ATG12	YBR217W	YJL027C	P47063	138 aa	Predicted RBP	4.48	□□□□□ -1.69
ATG12	YBR217W	JAC1	P53193	184 aa		4.48	□□□□□ -1.69
ATG12	YBR217W	COX18	P53239	316 aa		4.48	□□□□□ -1.69
ATG12	YBR217W	ERV25	P54837	211 aa	Known RBP	4.48	□□□□□ -1.69
ATG12	YBR217W	GRH1	Q04410	372 aa	Known RBP	4.48	□□□□□ -1.69
ATG12	YBR217W	SHH3	Q04487	196 aa		4.48	□□□□□ -1.69
ATG12	YBR217W	YDL242W	Q07746	117 aa		4.48	□□□□□ -1.69
ATG12	YBR217W	CDC7	P06243	507 aa		4.47	□□□□□ -1.69
ATG12	YBR217W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.47	□□□□□ -1.69	not detected
ATG12	YBR217W	POP5	P28005	173 aa		4.47	□□□□□ -1.69
ATG12	YBR217W	PTC7	P38797	343 aa		4.47	□□□□□ -1.69
ATG12	YBR217W	MST28	P39552	234 aa		4.47	□□□□□ -1.69
ATG12	YBR217W	GLE2	P40066	365 aa		4.47	□□□□□ -1.69
ATG12	YBR217W	POR2	P40478	281 aa		4.47	□□□□□ -1.69
ATG12	YBR217W	RTS2	P40962	232 aa		4.47	□□□□□ -1.69
ATG12	YBR217W	ATG27	P46989	271 aa		4.47	□□□□□ -1.69
ATG12	YBR217W	HAM1	P47119	197 aa	Known RBP	4.47	□□□□□ -1.69
ATG12	YBR217W	ECM27	P47144	725 aa		4.47	□□□□□ -1.69
ATG12	YBR217W	MIC27	P50945	234 aa		4.47	□□□□□ -1.69
ATG12	YBR217W	MST27	P53176	234 aa		4.47	□□□□□ -1.69
ATG12	YBR217W	BOR1	P53838	576 aa		4.47	□□□□□ -1.69
ATG12	YBR217W	OCA2	P53949	197 aa		4.47	□□□□□ -1.69
ATG12	YBR217W	ODC1	Q03028	310 aa		4.47	□□□□□ -1.69
ATG12	YBR217W	YMR007W	Q03675	126 aa		4.47	□□□□□ -1.69
ATG12	YBR217W	PLP1	Q04004	230 aa		4.47	□□□□□ -1.69
ATG12	YBR217W	ATG39	Q06159	398 aa		4.47	□□□□□ -1.69
ATG12	YBR217W	CTR3	Q06686	241 aa		4.47	□□□□□ -1.69
ATG12	YBR217W	TAR1	Q8TGM6	124 aa		4.47	□□□□□ -1.69

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