RNA–Protein interactions for RNA: YBL039C

URA7, Transcript of Major CTP synthase isozyme (see also URA8), yeast

Gene URA7, Length 1,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URA7	YBL039C	FLO11	P08640	1367 aa		4.16	□□□□□ -1.74
URA7	YBL039C	RPO41	P13433	1351 aa	Known RBP	4.16	□□□□□ -1.74
URA7	YBL039C	SGA1	P08019	549 aa		4.15	□□□□□ -1.74
URA7	YBL039C	SCL1	P21243	252 aa	Known RBP	4.15	□□□□□ -1.74
URA7	YBL039C	TOM40	P23644	387 aa	Known RBP	4.15	□□□□□ -1.74
URA7	YBL039C	AVT2	P39981	480 aa		4.15	□□□□□ -1.74
URA7	YBL039C	TTI2	P47168	421 aa		4.15	□□□□□ -1.74
URA7	YBL039C	ORM1	P53224	222 aa		4.15	□□□□□ -1.74
URA7	YBL039C	DAS2	Q12084	232 aa		4.15	□□□□□ -1.74
URA7	YBL039C	KRE5	P22023	1365 aa		4.15	□□□□□ -1.74
URA7	YBL039C	OCH1	P31755	480 aa		4.15	□□□□□ -1.75
URA7	YBL039C	TKL2	P33315	681 aa		4.15	□□□□□ -1.75
URA7	YBL039C	URB1	P34241	1764 aa	Known RBP	4.15	□□□□□ -1.75
URA7	YBL039C	ATP14	Q12349	124 aa		4.15	□□□□□ -1.75
URA7	YBL039C	DGK1	Q12382	290 aa		4.15	□□□□□ -1.75
URA7	YBL039C	REP2	P03872	296 aa		4.14	□□□□□ -1.75
URA7	YBL039C	RPL30	P14120	105 aa	Known RBP	4.14	□□□□□ -1.75
URA7	YBL039C	CCA1	P21269	546 aa		4.14	□□□□□ -1.75
URA7	YBL039C	RPC19	P28000	142 aa	Known RBP	4.14	□□□□□ -1.75
URA7	YBL039C	FMP46	P36141	133 aa	Known RBP	4.14	□□□□□ -1.75
URA7	YBL039C	CSH1	P38287	376 aa		4.14	□□□□□ -1.75
URA7	YBL039C	MEP2	P41948	499 aa		4.14	□□□□□ -1.75
URA7	YBL039C	CCC1	P47818	322 aa		4.14	□□□□□ -1.75
URA7	YBL039C	PSF1	Q12488	208 aa		4.14	□□□□□ -1.75
URA7	YBL039C	Q0144	Q9ZZW2	109 aa		4.14	□□□□□ -1.75
URA7	YBL039C	NSG1	P38837	291 aa		4.13	□□□□□ -1.75
URA7	YBL039C	SER2	P42941	309 aa		4.13	□□□□□ -1.75
URA7	YBL039C	SNX4	P47057	423 aa		4.13	□□□□□ -1.75
URA7	YBL039C	MRPS16	Q02608	121 aa		4.13	□□□□□ -1.75
URA7	YBL039C	AKR2	Q12013	749 aa		4.13	□□□□□ -1.75
URA7	YBL039C	FKS3	Q04952	1785 aa		4.13	□□□□□ -1.75
URA7	YBL039C	YPL073C	P40323	161 aa		4.12	□□□□□ -1.75
URA7	YBL039C	APJ1	P53940	528 aa		4.12	□□□□□ -1.75
URA7	YBL039C	TIM8	P57744	87 aa		4.12	□□□□□ -1.75
URA7	YBL039C	COF1	Q03048	143 aa	Known RBP	4.12	□□□□□ -1.75
URA7	YBL039C	YDR278C	Q05612	105 aa		4.12	□□□□□ -1.75
URA7	YBL039C	FRQ1	Q06389	190 aa		4.12	□□□□□ -1.75
URA7	YBL039C	SLO1	Q3E784	85 aa		4.12	□□□□□ -1.75
URA7	YBL039C	RPL9A	P05738	191 aa	Known RBP	4.12	□□□□□ -1.75
URA7	YBL039C	CPR5	P35176	225 aa		4.12	□□□□□ -1.75
URA7	YBL039C	YPT53	P36019	220 aa		4.12	□□□□□ -1.75
URA7	YBL039C	OST2	P46964	130 aa		4.12	□□□□□ -1.75
URA7	YBL039C	RPL9B	P51401	191 aa	Known RBP	4.12	□□□□□ -1.75
URA7	YBL039C	RSM10	Q03201	203 aa		4.12	□□□□□ -1.75
URA7	YBL039C	TSA2	Q04120	196 aa		4.12	□□□□□ -1.75
URA7	YBL039C	YLR412C-A	Q3E742	68 aa		4.12	□□□□□ -1.75
URA7	YBL039C	TY4B-H	P0C2J7	1802 aa		4.11	□□□□□ -1.75
URA7	YBL039C	TY4B-J	P47024	1803 aa		4.11	□□□□□ -1.75
URA7	YBL039C	RPS1A	P33442	255 aa	Known RBP	4.11	□□□□□ -1.75
URA7	YBL039C	YFR054C	P43622	192 aa		4.11	□□□□□ -1.75
URA7	YBL039C	SMD1	Q02260	146 aa	Predicted RBP	4.11	□□□□□ -1.75
URA7	YBL039C	FMN1	Q03778	218 aa		4.11	□□□□□ -1.75
URA7	YBL039C	YMR230W-A	Q3E7B5	62 aa		4.11	□□□□□ -1.75
URA7	YBL039C	YML100W-A	Q8TGT0	57 aa		4.11	□□□□□ -1.75
URA7	YBL039C	ADH1	P00330	348 aa	Known RBP	4.1	□□□□□ -1.75
URA7	YBL039C	ATP15	P21306	62 aa		4.1	□□□□□ -1.75
URA7	YBL039C	VMA11	P32842	164 aa		4.1	□□□□□ -1.75
URA7	YBL039C	ARC15	P40518	154 aa	RIP-Chip data	4.1	□□□□□ -1.75	not detected
URA7	YBL039C	YPI1	P43587	155 aa		4.1	□□□□□ -1.75
URA7	YBL039C	ALG9	P53868	555 aa	Known RBP	4.1	□□□□□ -1.75
URA7	YBL039C	YDR366C	P87287	132 aa		4.1	□□□□□ -1.75
URA7	YBL039C	MCH1	Q07376	486 aa		4.1	□□□□□ -1.75
URA7	YBL039C	YOL014W	Q08110	124 aa		4.1	□□□□□ -1.75
URA7	YBL039C	AUS1	Q08409	1394 aa		4.1	□□□□□ -1.75
URA7	YBL039C	CCH1	P50077	2039 aa		4.1	□□□□□ -1.75
URA7	YBL039C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
URA7	YBL039C	YHR125W	P38831	101 aa		4.09	□□□□□ -1.75
URA7	YBL039C	GLC8	P41818	229 aa		4.09	□□□□□ -1.75
URA7	YBL039C	YGL260W	P53056	76 aa		4.09	□□□□□ -1.75
URA7	YBL039C	TIM13	P53299	105 aa		4.09	□□□□□ -1.75
URA7	YBL039C	SDH7	Q04401	133 aa		4.09	□□□□□ -1.75
URA7	YBL039C	IES3	Q12345	250 aa		4.09	□□□□□ -1.75
URA7	YBL039C	YER134C	P40081	178 aa		4.09	□□□□□ -1.76
URA7	YBL039C	CAB4	P53332	305 aa		4.09	□□□□□ -1.76
URA7	YBL039C	FCF1	Q05498	189 aa	Predicted RBP	4.09	□□□□□ -1.76
URA7	YBL039C	FCY21	P40039	528 aa		4.08	□□□□□ -1.76
URA7	YBL039C	YFL019C	P43576	117 aa		4.08	□□□□□ -1.76
URA7	YBL039C	HHO1	P53551	258 aa		4.08	□□□□□ -1.76
URA7	YBL039C	DIG2	Q03373	323 aa	Known RBP	4.08	□□□□□ -1.76
URA7	YBL039C	NEJ1	Q06148	342 aa		4.08	□□□□□ -1.76
URA7	YBL039C	NKP2	Q06162	153 aa		4.08	□□□□□ -1.76
URA7	YBL039C	YIL177C	P40434	1758 aa		4.08	□□□□□ -1.76
URA7	YBL039C	YJL225C	P40889	1758 aa		4.08	□□□□□ -1.76
URA7	YBL039C	YER137C	P40083	148 aa	Known RBP	4.07	□□□□□ -1.76
URA7	YBL039C	DSK2	P48510	373 aa		4.07	□□□□□ -1.76
URA7	YBL039C	YGR039W	P53225	103 aa		4.07	□□□□□ -1.76
URA7	YBL039C	RAD10	P06838	210 aa		4.07	□□□□□ -1.76
URA7	YBL039C	ATP5	P09457	212 aa		4.07	□□□□□ -1.76
URA7	YBL039C	FIP1	P45976	327 aa		4.07	□□□□□ -1.76
URA7	YBL039C	SPG3	Q04398	127 aa	Predicted RBP	4.07	□□□□□ -1.76
URA7	YBL039C	CNL1	Q06333	122 aa		4.07	□□□□□ -1.76
URA7	YBL039C	NAT3	Q06504	195 aa		4.07	□□□□□ -1.76
URA7	YBL039C	ROM2	P51862	1356 aa	Known RBP	4.06	□□□□□ -1.76
URA7	YBL039C	TIM9	O74700	87 aa		4.06	□□□□□ -1.76
URA7	YBL039C	RPS19A	P07280	144 aa	Known RBP	4.06	□□□□□ -1.76
URA7	YBL039C	RPS19B	P07281	144 aa	Predicted RBP	4.06	□□□□□ -1.76
URA7	YBL039C	RPS20	P38701	121 aa	Known RBP	4.06	□□□□□ -1.76
URA7	YBL039C	YER188W	P40103	239 aa		4.06	□□□□□ -1.76
URA7	YBL039C	PRE5	P40302	234 aa	Known RBP	4.06	□□□□□ -1.76
URA7	YBL039C	APS3	P47064	194 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms