RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W ARP3P47117 449 aaKnown RBP2.82□□□□□ -1.96
NUP60YAR002W DAN1P47178 298 aa2.82□□□□□ -1.96
NUP60YAR002W YGL262WP53054 175 aa2.82□□□□□ -1.96
NUP60YAR002W ATP23P53722 227 aa2.82□□□□□ -1.96
NUP60YAR002W CRZ1P53968 678 aa2.82□□□□□ -1.96
NUP60YAR002W DCS1Q06151 350 aa2.82□□□□□ -1.96
NUP60YAR002W RFM1Q12192 310 aa2.82□□□□□ -1.96
NUP60YAR002W SME1Q12330 94 aaPredicted RBP2.82□□□□□ -1.96
NUP60YAR002W VPS63O13549 108 aa2.82□□□□□ -1.96
NUP60YAR002W PAU1P0CE88 120 aa2.82□□□□□ -1.96
NUP60YAR002W PAU14P0CE89 120 aa2.82□□□□□ -1.96
NUP60YAR002W PAU6P0CE90 120 aa2.82□□□□□ -1.96
NUP60YAR002W PAU18P0CE91 120 aa2.82□□□□□ -1.96
NUP60YAR002W PAU8P0CE92 120 aa2.82□□□□□ -1.96
NUP60YAR002W PAU11P0CE93 120 aa2.82□□□□□ -1.96
NUP60YAR002W RPB3P16370 318 aaKnown RBP2.82□□□□□ -1.96
NUP60YAR002W FCY2P17064 533 aa2.82□□□□□ -1.96
NUP60YAR002W SEC59P20048 519 aa2.82□□□□□ -1.96
NUP60YAR002W QCR9P22289 66 aa2.82□□□□□ -1.96
NUP60YAR002W RPI1P23250 407 aaKnown RBP2.82□□□□□ -1.96
NUP60YAR002W POP5P28005 173 aa2.82□□□□□ -1.96
NUP60YAR002W NTF2P33331 125 aaKnown RBP2.82□□□□□ -1.96
NUP60YAR002W SHB17P36136 271 aaKnown RBP2.82□□□□□ -1.96
NUP60YAR002W SDH4P37298 181 aa2.82□□□□□ -1.96
NUP60YAR002W YBR220CP38318 560 aa2.82□□□□□ -1.96
NUP60YAR002W PAU13P38725 120 aa2.82□□□□□ -1.96
NUP60YAR002W WSS1P38838 269 aa2.82□□□□□ -1.96
NUP60YAR002W YGR269WP40326 108 aa2.82□□□□□ -1.96
NUP60YAR002W PHS1P40857 217 aa2.82□□□□□ -1.96
NUP60YAR002W BNS1P50084 137 aa2.82□□□□□ -1.96
NUP60YAR002W RIB4P50861 169 aaPredicted RBP2.82□□□□□ -1.96
NUP60YAR002W HCH1P53834 153 aa2.82□□□□□ -1.96
NUP60YAR002W SUR7P54003 302 aa2.82□□□□□ -1.96
NUP60YAR002W RPL21AQ02753 160 aaKnown RBP2.82□□□□□ -1.96
NUP60YAR002W PAU10Q03050 120 aa2.82□□□□□ -1.96
NUP60YAR002W LPP1Q04396 274 aa2.82□□□□□ -1.96
NUP60YAR002W DXO1Q06349 442 aa2.82□□□□□ -1.96
NUP60YAR002W PAU20Q08322 120 aa2.82□□□□□ -1.96
NUP60YAR002W RPL21BQ12672 160 aaKnown RBP2.82□□□□□ -1.96
NUP60YAR002W PAU9Q3E770 120 aa2.82□□□□□ -1.96
NUP60YAR002W TEL1P38110 2787 aa2.82□□□□□ -1.96
NUP60YAR002W RPL39P04650 51 aa2.81□□□□□ -1.96
NUP60YAR002W RPL9AP05738 191 aaKnown RBP2.81□□□□□ -1.96
NUP60YAR002W RPS25BP0C0T4 108 aaKnown RBP2.81□□□□□ -1.96
NUP60YAR002W URA5P13298 226 aaKnown RBP2.81□□□□□ -1.96
NUP60YAR002W APA2P22108 325 aa2.81□□□□□ -1.96
NUP60YAR002W MRPS9P38120 278 aa2.81□□□□□ -1.96
NUP60YAR002W TRS20P38334 175 aa2.81□□□□□ -1.96
NUP60YAR002W RTC3P38804 111 aaPredicted RBP2.81□□□□□ -1.96
NUP60YAR002W DFG10P40526 253 aa2.81□□□□□ -1.96
NUP60YAR002W PAU15P40585 124 aa2.81□□□□□ -1.96
NUP60YAR002W RTS2P40962 232 aa2.81□□□□□ -1.96
NUP60YAR002W PIR5P46999 287 aa2.81□□□□□ -1.96
NUP60YAR002W RPL9BP51401 191 aaKnown RBP2.81□□□□□ -1.96
NUP60YAR002W ECM18Q04623 453 aa2.81□□□□□ -1.96
NUP60YAR002W YTH1Q06102 208 aaPredicted RBP2.81□□□□□ -1.96
NUP60YAR002W YPS3Q12303 508 aa2.81□□□□□ -1.96
NUP60YAR002W YLR118CQ12354 227 aa2.81□□□□□ -1.96
NUP60YAR002W ERG27Q12452 347 aaKnown RBP2.81□□□□□ -1.96
NUP60YAR002W RPS25AQ3E792 108 aaPredicted RBP2.81□□□□□ -1.96
NUP60YAR002W CDC7P06243 507 aa2.8□□□□□ -1.96
NUP60YAR002W POF1P25576 258 aa2.8□□□□□ -1.96
NUP60YAR002W ACP1P32463 125 aa2.8□□□□□ -1.96
NUP60YAR002W SPS18P32572 300 aa2.8□□□□□ -1.96
NUP60YAR002W YBL059WP34224 193 aa2.8□□□□□ -1.96
NUP60YAR002W QDR3P38227 689 aa2.8□□□□□ -1.96
NUP60YAR002W IMD2P38697 523 aaKnown RBP2.8□□□□□ -1.96
NUP60YAR002W PSD1P39006 500 aa2.8□□□□□ -1.96
NUP60YAR002W YJL118WP47022 219 aa2.8□□□□□ -1.96
NUP60YAR002W BNA1P47096 177 aa2.8□□□□□ -1.96
NUP60YAR002W MGA1P53050 456 aa2.8□□□□□ -1.96
NUP60YAR002W SMM1P53720 384 aaKnown RBP2.8□□□□□ -1.96
NUP60YAR002W SED1Q01589 338 aa2.8□□□□□ -1.96
NUP60YAR002W DYN2Q02647 92 aa2.8□□□□□ -1.96
NUP60YAR002W YMR007WQ03675 126 aa2.8□□□□□ -1.96
NUP60YAR002W AVO2Q04749 426 aa2.8□□□□□ -1.96
NUP60YAR002W CTR3Q06686 241 aa2.8□□□□□ -1.96
NUP60YAR002W YOR029WQ12243 111 aa2.8□□□□□ -1.96
NUP60YAR002W POC4Q12245 148 aaPredicted RBP2.8□□□□□ -1.96
NUP60YAR002W ERV2Q12284 196 aa2.8□□□□□ -1.96
NUP60YAR002W YGL258W-AQ3E740 77 aa2.8□□□□□ -1.96
NUP60YAR002W YMR105W-AQ8TGS8 64 aa2.8□□□□□ -1.96
NUP60YAR002W ATP10P18496 279 aa2.79□□□□□ -1.96
NUP60YAR002W ALK2P32789 676 aaPredicted RBP2.79□□□□□ -1.96
NUP60YAR002W SOR1P35497 357 aaKnown RBP2.79□□□□□ -1.96
NUP60YAR002W ATP3P38077 311 aaKnown RBP2.79□□□□□ -1.96
NUP60YAR002W YPT31P38555 223 aaKnown RBP2.79□□□□□ -1.96
NUP60YAR002W NSA2P40078 261 aaKnown RBP2.79□□□□□ -1.96
NUP60YAR002W BOR1P53838 576 aa2.79□□□□□ -1.96
NUP60YAR002W YNL046WP53956 172 aa2.79□□□□□ -1.96
NUP60YAR002W FRQ1Q06389 190 aa2.79□□□□□ -1.96
NUP60YAR002W SOR2Q07786 357 aa2.79□□□□□ -1.96
NUP60YAR002W RAD28Q12021 506 aa2.79□□□□□ -1.96
NUP60YAR002W YOS1Q3E834 85 aa2.79□□□□□ -1.96
NUP60YAR002W YLR302CO13544 120 aa2.79□□□□□ -1.96
NUP60YAR002W MRS3P10566 314 aa2.79□□□□□ -1.96
NUP60YAR002W DAL80P26343 269 aa2.79□□□□□ -1.96
NUP60YAR002W YPT53P36019 220 aa2.79□□□□□ -1.96
NUP60YAR002W MIA40P36046 403 aa2.79□□□□□ -1.96
NUP60YAR002W YBR013CP38215 129 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms