RNA–Protein interactions for RNA: SCR1

SCR1, Transcript of RNA subunit of the Signal Recognition Particle (SRP), yeastyeast

Gene SCR1, Length 522 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCR1SCR1 MRS3P10566 314 aa11.48□□□□□ -0.57
SCR1SCR1 ALK2P32789 676 aaPredicted RBP11.48□□□□□ -0.57
SCR1SCR1 AVT5P38176 459 aa11.48□□□□□ -0.57
SCR1SCR1 RXT3Q07458 294 aa11.48□□□□□ -0.57
SCR1SCR1 YOR352WQ08816 343 aa11.48□□□□□ -0.57
SCR1SCR1 CYC3P06182 269 aa11.47□□□□□ -0.57
SCR1SCR1 POR2P40478 281 aa11.47□□□□□ -0.57
SCR1SCR1 ERV25P54837 211 aaKnown RBP11.47□□□□□ -0.57
SCR1SCR1 TDA6Q06466 467 aa11.47□□□□□ -0.57
SCR1SCR1 POC4Q12245 148 aaPredicted RBP11.47□□□□□ -0.57
SCR1SCR1 AGC1Q12482 902 aa11.47□□□□□ -0.57
SCR1SCR1 CKS1P20486 150 aaKnown RBP11.46□□□□□ -0.57
SCR1SCR1 SDH4P37298 181 aa11.46□□□□□ -0.57
SCR1SCR1 QDR3P38227 689 aa11.46□□□□□ -0.57
SCR1SCR1 MPC2P38857 129 aa11.46□□□□□ -0.57
SCR1SCR1 RPS25BP0C0T4 108 aaKnown RBP11.45□□□□□ -0.58
SCR1SCR1 CSH1P38287 376 aa11.45□□□□□ -0.58
SCR1SCR1 BDH1P39714 382 aa11.45□□□□□ -0.58
SCR1SCR1 YMR082CQ04276 118 aa11.45□□□□□ -0.58
SCR1SCR1 RRG8Q06109 277 aa11.45□□□□□ -0.58
SCR1SCR1 RPS25AQ3E792 108 aaPredicted RBP11.45□□□□□ -0.58
SCR1SCR1 IMD2P38697 523 aaKnown RBP11.44□□□□□ -0.58
SCR1SCR1 SDH7Q04401 133 aa11.44□□□□□ -0.58
SCR1SCR1 TIM18Q08749 192 aa11.44□□□□□ -0.58
SCR1SCR1 PIS1P06197 220 aaKnown RBP11.43□□□□□ -0.58
SCR1SCR1 YGR018CP53211 109 aa11.43□□□□□ -0.58
SCR1SCR1 YLR281CQ05863 155 aa11.43□□□□□ -0.58
SCR1SCR1 YLR179CQ06252 201 aaKnown RBP11.43□□□□□ -0.58
SCR1SCR1 POS5Q06892 414 aa11.43□□□□□ -0.58
SCR1SCR1 AGX1P43567 385 aa11.42□□□□□ -0.58
SCR1SCR1 YCR022CP25620 114 aa11.41□□□□□ -0.58
SCR1SCR1 POP5P28005 173 aa11.41□□□□□ -0.58
SCR1SCR1 BOL3P39724 118 aa11.41□□□□□ -0.58
SCR1SCR1 YJR015WP47090 510 aa11.41□□□□□ -0.58
SCR1SCR1 CAX4P53223 239 aa11.41□□□□□ -0.58
SCR1SCR1 ORM1P53224 222 aa11.41□□□□□ -0.58
SCR1SCR1 GRH1Q04410 372 aaKnown RBP11.41□□□□□ -0.58
SCR1SCR1 FCF2Q12035 217 aaPredicted RBP11.41□□□□□ -0.58
SCR1SCR1 YDR157WA0A023PZE8 133 aa11.4□□□□□ -0.58
SCR1SCR1 MDM10P18409 493 aa11.4□□□□□ -0.58
SCR1SCR1 UPS2P35200 230 aa11.4□□□□□ -0.58
SCR1SCR1 ECM33P38248 429 aaKnown RBP11.4□□□□□ -0.58
SCR1SCR1 YEA4P40004 342 aa11.4□□□□□ -0.58
SCR1SCR1 RTS2P40962 232 aa11.4□□□□□ -0.58
SCR1SCR1 YJR111CP47148 283 aaKnown RBP11.4□□□□□ -0.58
SCR1SCR1 LST7P53237 242 aa11.4□□□□□ -0.58
SCR1SCR1 PRR2Q12310 699 aa11.4□□□□□ -0.58
SCR1SCR1 MAG1P22134 296 aaKnown RBP11.39□□□□□ -0.59
SCR1SCR1 MIC27P50945 234 aa11.39□□□□□ -0.59
SCR1SCR1 LDS2Q08218 356 aa11.39□□□□□ -0.59
SCR1SCR1 GET2P40056 285 aa11.38□□□□□ -0.59
SCR1SCR1 YER137CP40083 148 aaKnown RBP11.38□□□□□ -0.59
SCR1SCR1 BOR1P53838 576 aa11.38□□□□□ -0.59
SCR1SCR1 YDR274CP87283 123 aa11.38□□□□□ -0.59
SCR1SCR1 TRI1Q05024 226 aa11.38□□□□□ -0.59
SCR1SCR1 USV1Q12132 391 aa11.38□□□□□ -0.59
SCR1SCR1 GCN3P14741 305 aa11.37□□□□□ -0.59
SCR1SCR1 ATG39Q06159 398 aa11.37□□□□□ -0.59
SCR1SCR1 CDC7P06243 507 aa11.36□□□□□ -0.59
SCR1SCR1 SNF11P38956 169 aa11.36□□□□□ -0.59
SCR1SCR1 PEX7P39108 375 aa11.36□□□□□ -0.59
SCR1SCR1 YGR269WP40326 108 aa11.36□□□□□ -0.59
SCR1SCR1 CAF16P43569 289 aa11.36□□□□□ -0.59
SCR1SCR1 BUL1P48524 976 aa11.36□□□□□ -0.59
SCR1SCR1 ODC1Q03028 310 aa11.36□□□□□ -0.59
SCR1SCR1 MSC3Q05812 728 aa11.36□□□□□ -0.59
SCR1SCR1 POM34Q12445 299 aa11.36□□□□□ -0.59
SCR1SCR1 SAS2P40963 338 aa11.35□□□□□ -0.59
SCR1SCR1 YJL027CP47063 138 aaPredicted RBP11.35□□□□□ -0.59
SCR1SCR1 OCA2P53949 197 aa11.35□□□□□ -0.59
SCR1SCR1 ANT1Q06497 328 aa11.35□□□□□ -0.59
SCR1SCR1 ERS1P17261 260 aa11.34□□□□□ -0.59
SCR1SCR1 YCR025CP25352 136 aa11.34□□□□□ -0.59
SCR1SCR1 SNU13P39990 126 aaKnown RBP11.34□□□□□ -0.59
SCR1SCR1 YGL117WP53133 265 aa11.34□□□□□ -0.59
SCR1SCR1 ALG13P53178 202 aa11.34□□□□□ -0.59
SCR1SCR1 DFR1P07807 211 aaKnown RBP RIP-Chip data11.33□□□□□ -0.6not detected
SCR1SCR1 ACP1P32463 125 aa11.33□□□□□ -0.6
SCR1SCR1 SRB7P47822 140 aa11.33□□□□□ -0.6
SCR1SCR1 HST4P53688 370 aa11.33□□□□□ -0.6
SCR1SCR1 FYV6P53913 173 aa11.33□□□□□ -0.6
SCR1SCR1 SHH3Q04487 196 aa11.33□□□□□ -0.6
SCR1SCR1 PTC7P38797 343 aa11.32□□□□□ -0.6
SCR1SCR1 TAD2P47058 250 aa11.32□□□□□ -0.6
SCR1SCR1 TDA4P47153 279 aa11.32□□□□□ -0.6
SCR1SCR1 YNR066CP53752 436 aa11.32□□□□□ -0.6
SCR1SCR1 YPR013CQ12145 317 aa11.32□□□□□ -0.6
SCR1SCR1 YMR316C-AI2HB70 103 aa11.31□□□□□ -0.6
SCR1SCR1 QCR9P22289 66 aa11.31□□□□□ -0.6
SCR1SCR1 ASP1P38986 381 aaPredicted RBP11.31□□□□□ -0.6
SCR1SCR1 UBC7Q02159 165 aa11.31□□□□□ -0.6
SCR1SCR1 ARR3Q06598 404 aa11.31□□□□□ -0.6
SCR1SCR1 TAR1Q8TGM6 124 aa11.31□□□□□ -0.6
SCR1SCR1 YHR213WP0CI67 198 aa11.3□□□□□ -0.6
SCR1SCR1 SHB17P36136 271 aaKnown RBP11.3□□□□□ -0.6
SCR1SCR1 SFT2P38166 215 aa11.29□□□□□ -0.6
SCR1SCR1 MRPL50P53724 139 aa11.29□□□□□ -0.6
SCR1SCR1 YDL242WQ07746 117 aa11.29□□□□□ -0.6
SCR1SCR1 YLR125WQ12138 136 aa11.29□□□□□ -0.6
SCR1SCR1 UBI4P0CG63 381 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms