RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 GDAP2Q9NXN4 497 aa16.18■□□□□ 0.18
PHGDH-231ENST00000641939 CDH7Q9ULB5 785 aa16.18■□□□□ 0.18
PHGDH-231ENST00000641939 MUC6Q6W4X9 2439 aa16.18■□□□□ 0.18
PHGDH-231ENST00000641939 MTMR11A4FU01 709 aa16.17■□□□□ 0.18
PHGDH-231ENST00000641939 PLD1Q13393 1074 aa16.17■□□□□ 0.18
PHGDH-231ENST00000641939 SNW1Q13573 536 aaKnown RBP16.17■□□□□ 0.18
PHGDH-231ENST00000641939 SLC39A12Q504Y0 691 aa16.17■□□□□ 0.18
PHGDH-231ENST00000641939 CENPPQ6IPU0 288 aa16.17■□□□□ 0.18
PHGDH-231ENST00000641939 TRAPPC11Q7Z392 1133 aa16.17■□□□□ 0.18
PHGDH-231ENST00000641939 BMP8AQ7Z5Y6 402 aa16.17■□□□□ 0.18
PHGDH-231ENST00000641939 TMEM86AQ8N2M4 240 aa16.17■□□□□ 0.18
PHGDH-231ENST00000641939 ATAD1Q8NBU5 361 aa16.17■□□□□ 0.18
PHGDH-231ENST00000641939 ENGASEQ8NFI3 743 aa16.17■□□□□ 0.18
PHGDH-231ENST00000641939 FGF13Q92913 245 aa16.17■□□□□ 0.18
PHGDH-231ENST00000641939 ASIC4Q96FT7 647 aa16.17■□□□□ 0.18
PHGDH-231ENST00000641939 HPDLQ96IR7 371 aa16.17■□□□□ 0.18
PHGDH-231ENST00000641939 ZNF512Q96ME7 567 aaPredicted RBP16.17■□□□□ 0.18
PHGDH-231ENST00000641939 CORO1BQ9BR76 489 aa16.17■□□□□ 0.18
PHGDH-231ENST00000641939 ZCWPW1Q9H0M4 648 aa16.17■□□□□ 0.18
PHGDH-231ENST00000641939 CRISPLD1Q9H336 500 aa16.17■□□□□ 0.18
PHGDH-231ENST00000641939 SMOC2Q9H3U7 446 aa16.17■□□□□ 0.18
PHGDH-231ENST00000641939 L1RE1Q9UN81 338 aa16.17■□□□□ 0.18
PHGDH-231ENST00000641939 MRPS23Q9Y3D9 190 aaKnown RBP16.17■□□□□ 0.18
PHGDH-231ENST00000641939 YIPF1Q9Y548 306 aa16.17■□□□□ 0.18
PHGDH-231ENST00000641939 SNX9Q9Y5X1 595 aa16.17■□□□□ 0.18
PHGDH-231ENST00000641939 CALUO43852 315 aaPredicted RBP16.16■□□□□ 0.18
PHGDH-231ENST00000641939 NR3C1P04150 777 aa16.16■□□□□ 0.18
PHGDH-231ENST00000641939 ALDH1A3P47895 512 aa16.16■□□□□ 0.18
PHGDH-231ENST00000641939 FAM160A1Q05DH4 1040 aa16.16■□□□□ 0.18
PHGDH-231ENST00000641939 SMARCB1Q12824 385 aa16.16■□□□□ 0.18
PHGDH-231ENST00000641939 PNOCQ13519 176 aa16.16■□□□□ 0.18
PHGDH-231ENST00000641939 HTR4Q13639 388 aa16.16■□□□□ 0.18
PHGDH-231ENST00000641939 SLC5A9Q2M3M2 681 aa16.16■□□□□ 0.18
PHGDH-231ENST00000641939 IQCEQ6IPM2 695 aa16.16■□□□□ 0.18
PHGDH-231ENST00000641939 GUF1Q8N442 669 aaKnown RBP16.16■□□□□ 0.18
PHGDH-231ENST00000641939 PDCL2Q8N4E4 241 aa16.16■□□□□ 0.18
PHGDH-231ENST00000641939 TOP6BLQ8N6T0 577 aa16.16■□□□□ 0.18
PHGDH-231ENST00000641939 SPATA18Q8TC71 538 aa16.16■□□□□ 0.18
PHGDH-231ENST00000641939 RSAD2Q8WXG1 361 aa16.16■□□□□ 0.18
PHGDH-231ENST00000641939 PBXIP1Q96AQ6 731 aa16.16■□□□□ 0.18
PHGDH-231ENST00000641939 CEP72Q9P209 647 aa16.16■□□□□ 0.18
PHGDH-231ENST00000641939 HSFX1Q9UBD0 423 aa16.16■□□□□ 0.18
PHGDH-231ENST00000641939 SLC27A5Q9Y2P5 690 aa16.16■□□□□ 0.18
PHGDH-231ENST00000641939 ANHXE9PGG2 379 aa16.15■□□□□ 0.18
PHGDH-231ENST00000641939 TSPY1Q01534 308 aa16.15■□□□□ 0.18
PHGDH-231ENST00000641939 PRSS36Q5K4E3 855 aa16.15■□□□□ 0.18
PHGDH-231ENST00000641939 CYP4A22Q5TCH4 519 aa16.15■□□□□ 0.18
PHGDH-231ENST00000641939 PDZD4Q76G19 769 aaPredicted RBP16.15■□□□□ 0.18
PHGDH-231ENST00000641939 DPH6Q7L8W6 267 aa16.15■□□□□ 0.18
PHGDH-231ENST00000641939 LRRTM3Q86VH5 581 aa16.15■□□□□ 0.18
PHGDH-231ENST00000641939 NPAS3Q8IXF0 933 aa16.15■□□□□ 0.18
PHGDH-231ENST00000641939 DCP1BQ8IZD4 617 aaKnown RBP16.15■□□□□ 0.18
PHGDH-231ENST00000641939 LEMD2Q8NC56 503 aa16.15■□□□□ 0.18
PHGDH-231ENST00000641939 C2orf15Q8WU43 125 aaKnown RBP16.15■□□□□ 0.18
PHGDH-231ENST00000641939 ING5Q8WYH8 240 aa16.15■□□□□ 0.18
PHGDH-231ENST00000641939 GZF1Q9H116 711 aaPredicted RBP16.15■□□□□ 0.18
PHGDH-231ENST00000641939 DUSP12Q9UNI6 340 aa16.15■□□□□ 0.18
PHGDH-231ENST00000641939 TRAF3IP3Q9Y228 551 aa16.15■□□□□ 0.18
PHGDH-231ENST00000641939 HCN4Q9Y3Q4 1203 aa16.15■□□□□ 0.18
PHGDH-231ENST00000641939 ZNF197O14709 1029 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 MICAL2O94851 1124 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 LHX1P48742 406 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 TUFMP49411 452 aaKnown RBP16.14■□□□□ 0.17
PHGDH-231ENST00000641939 CASP4P49662 377 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 EPHB3P54753 998 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 MYL7Q01449 175 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 SOWAHAQ2M3V2 549 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 MTSS1LQ765P7 747 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 ADGRF2Q8IZF7 708 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 SLC44A3Q8N4M1 653 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 TTC9BQ8N6N2 239 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 SPPL2BQ8TCT7 592 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 PLEKHO2Q8TD55 490 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 PARD3BQ8TEW8 1205 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 ZNF516Q92618 1163 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 TIGD1Q96MW7 591 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 ACBD6Q9BR61 282 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 ASAH2Q9NR71 780 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 RMND1Q9NWS8 449 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 DDX43Q9NXZ2 648 aaKnown RBP16.14■□□□□ 0.17
PHGDH-231ENST00000641939 GDE1Q9NZC3 331 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 RAPGEFL1Q9UHV5 662 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 HOOK1Q9UJC3 728 aaKnown RBP16.14■□□□□ 0.17
PHGDH-231ENST00000641939 MAPK8IP1Q9UQF2 711 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 FRMD4BQ9Y2L6 1034 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 ASB3Q9Y575 518 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 NUMBLQ9Y6R0 609 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 KMT2EQ8IZD2 1858 aa16.14■□□□□ 0.17
PHGDH-231ENST00000641939 DENND4CQ5VZ89 1909 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 GABRDO14764 452 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 SMC2O95347 1197 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 CST3P01034 146 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-231ENST00000641939 CEBPBP17676 345 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 CCR2P41597 374 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 AP3M2P53677 418 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 EPHA5P54756 1037 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 CLDN10P78369 228 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 TRPC3Q13507 836 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 NFIL3Q16649 462 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 CEP135Q66GS9 1140 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms