RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 SEPT11Q9NVA2 429 aaKnown RBP21.15■□□□□ 0.98
PHGDH-210ENST00000641115 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.15■□□□□ 0.98
PHGDH-210ENST00000641115 HMGXB4Q9UGU5 601 aa21.15■□□□□ 0.98
PHGDH-210ENST00000641115 PUF60Q9UHX1 559 aaKnown RBP21.15■□□□□ 0.98
PHGDH-210ENST00000641115 PRG3Q9Y2Y8 225 aaPredicted RBP21.15■□□□□ 0.98
PHGDH-210ENST00000641115 ALDH2P05091 517 aa21.15■□□□□ 0.98
PHGDH-210ENST00000641115 PAEPP09466 180 aa21.15■□□□□ 0.98
PHGDH-210ENST00000641115 CCDC175P0C221 793 aa21.15■□□□□ 0.98
PHGDH-210ENST00000641115 IGFBP6P24592 240 aaPredicted RBP21.15■□□□□ 0.98
PHGDH-210ENST00000641115 CDR2Q01850 454 aa21.15■□□□□ 0.98
PHGDH-210ENST00000641115 GFPT1Q06210 699 aaPredicted RBP21.15■□□□□ 0.98
PHGDH-210ENST00000641115 LIMS2Q7Z4I7 341 aa21.15■□□□□ 0.98
PHGDH-210ENST00000641115 TMCO2Q7Z6W1 182 aaPredicted RBP21.15■□□□□ 0.98
PHGDH-210ENST00000641115 UNC93AQ86WB7 457 aa21.15■□□□□ 0.98
PHGDH-210ENST00000641115 TMEM86AQ8N2M4 240 aa21.15■□□□□ 0.98
PHGDH-210ENST00000641115 PDCL2Q8N4E4 241 aa21.15■□□□□ 0.98
PHGDH-210ENST00000641115 KIAA1524Q8TCG1 905 aa21.15■□□□□ 0.98
PHGDH-210ENST00000641115 KBTBD7Q8WVZ9 684 aa21.15■□□□□ 0.98
PHGDH-210ENST00000641115 ZNF689Q96CS4 500 aaPredicted RBP21.15■□□□□ 0.98
PHGDH-210ENST00000641115 TMEM176AQ96HP8 235 aa21.15■□□□□ 0.98
PHGDH-210ENST00000641115 NR2E3Q9Y5X4 410 aa21.15■□□□□ 0.98
PHGDH-210ENST00000641115 A0A087X0T9 212 aa21.14■□□□□ 0.97
PHGDH-210ENST00000641115 NRP1O14786 923 aa21.14■□□□□ 0.97
PHGDH-210ENST00000641115 THAP12O43422 761 aa21.14■□□□□ 0.97
PHGDH-210ENST00000641115 TRAPPC3O43617 180 aa21.14■□□□□ 0.97
PHGDH-210ENST00000641115 FAM228BP0C875 321 aa21.14■□□□□ 0.97
PHGDH-210ENST00000641115 WARSP23381 471 aaKnown RBP21.14■□□□□ 0.97
PHGDH-210ENST00000641115 BRCC3P46736 316 aa21.14■□□□□ 0.97
PHGDH-210ENST00000641115 RAD23BP54727 409 aa21.14■□□□□ 0.97
PHGDH-210ENST00000641115 KRT83P78385 493 aa21.14■□□□□ 0.97
PHGDH-210ENST00000641115 TAF3Q5VWG9 929 aa21.14■□□□□ 0.97
PHGDH-210ENST00000641115 GLYCTKQ8IVS8 523 aa21.14■□□□□ 0.97
PHGDH-210ENST00000641115 CMTR2Q8IYT2 770 aaKnown RBP21.14■□□□□ 0.97
PHGDH-210ENST00000641115 WHAMMQ8TF30 809 aa21.14■□□□□ 0.97
PHGDH-210ENST00000641115 YME1L1Q96TA2 773 aa21.14■□□□□ 0.97
PHGDH-210ENST00000641115 SYT11Q9BT88 431 aa21.14■□□□□ 0.97
PHGDH-210ENST00000641115 COLEC11Q9BWP8 271 aa21.14■□□□□ 0.97
PHGDH-210ENST00000641115 ELOVL4Q9GZR5 314 aa21.14■□□□□ 0.97
PHGDH-210ENST00000641115 HCSTQ9UBK5 93 aa21.14■□□□□ 0.97
PHGDH-210ENST00000641115 DSEQ9UL01 958 aa21.14■□□□□ 0.97
PHGDH-210ENST00000641115 FAN1Q9Y2M0 1017 aa21.14■□□□□ 0.97
PHGDH-210ENST00000641115 A8MXQ7 604 aa21.13■□□□□ 0.97
PHGDH-210ENST00000641115 M0QZQ0 153 aa21.13■□□□□ 0.97
PHGDH-210ENST00000641115 TADA2AO75478 443 aa21.13■□□□□ 0.97
PHGDH-210ENST00000641115 ITGB1P05556 798 aa21.13■□□□□ 0.97
PHGDH-210ENST00000641115 CD19P15391 556 aa21.13■□□□□ 0.97
PHGDH-210ENST00000641115 GNL1P36915 607 aaPredicted RBP21.13■□□□□ 0.97
PHGDH-210ENST00000641115 SLC11A1P49279 550 aa21.13■□□□□ 0.97
PHGDH-210ENST00000641115 WSCD1Q658N2 575 aa21.13■□□□□ 0.97
PHGDH-210ENST00000641115 CD300LGQ6UXG3 332 aa21.13■□□□□ 0.97
PHGDH-210ENST00000641115 ACRBPQ8NEB7 543 aa21.13■□□□□ 0.97
PHGDH-210ENST00000641115 HERVK_113Q902F9 699 aa21.13■□□□□ 0.97
PHGDH-210ENST00000641115 DDX1Q92499 740 aaKnown RBP21.13■□□□□ 0.97
PHGDH-210ENST00000641115 SUSD3Q96L08 255 aa21.13■□□□□ 0.97
PHGDH-210ENST00000641115 TWNKQ96RR1 684 aa21.13■□□□□ 0.97
PHGDH-210ENST00000641115 PDCL3Q9H2J4 239 aa21.13■□□□□ 0.97
PHGDH-210ENST00000641115 RC3H2Q9HBD1 1191 aaKnown RBP21.13■□□□□ 0.97
PHGDH-210ENST00000641115 LUC7LQ9NQ29 371 aaKnown RBP21.13■□□□□ 0.97
PHGDH-210ENST00000641115 ADGRG1Q9Y653 693 aa21.13■□□□□ 0.97
PHGDH-210ENST00000641115 F8W810 466 aa21.12■□□□□ 0.97
PHGDH-210ENST00000641115 I3L4J1 428 aa21.12■□□□□ 0.97
PHGDH-210ENST00000641115 CCP110O43303 1012 aa21.12■□□□□ 0.97
PHGDH-210ENST00000641115 ZSCAN12O43309 604 aa21.12■□□□□ 0.97
PHGDH-210ENST00000641115 MED7O43513 233 aa21.12■□□□□ 0.97
PHGDH-210ENST00000641115 LCA5LO95447 670 aa21.12■□□□□ 0.97
PHGDH-210ENST00000641115 CALCAP01258 141 aa21.12■□□□□ 0.97
PHGDH-210ENST00000641115 MMEP08473 750 aa21.12■□□□□ 0.97
PHGDH-210ENST00000641115 LHX1P48742 406 aa21.12■□□□□ 0.97
PHGDH-210ENST00000641115 ALDH7A1P49419 539 aaKnown RBP21.12■□□□□ 0.97
PHGDH-210ENST00000641115 ORC1Q13415 861 aa21.12■□□□□ 0.97
PHGDH-210ENST00000641115 BTG3Q14201 252 aaPredicted RBP21.12■□□□□ 0.97
PHGDH-210ENST00000641115 METTL23Q86XA0 190 aa21.12■□□□□ 0.97
PHGDH-210ENST00000641115 SLC4A11Q8NBS3 891 aa21.12■□□□□ 0.97
PHGDH-210ENST00000641115 SPATA18Q8TC71 538 aa21.12■□□□□ 0.97
PHGDH-210ENST00000641115 SLC9A7Q96T83 725 aa21.12■□□□□ 0.97
PHGDH-210ENST00000641115 ADAM28Q9UKQ2 775 aa21.12■□□□□ 0.97
PHGDH-210ENST00000641115 STXBP5LQ9Y2K9 1186 aa21.12■□□□□ 0.97
PHGDH-210ENST00000641115 PPP2R2CQ9Y2T4 447 aa21.12■□□□□ 0.97
PHGDH-210ENST00000641115 SLC4A7Q9Y6M7 1214 aa21.12■□□□□ 0.97
PHGDH-210ENST00000641115 DDX3XO00571 662 aaKnown RBP eCLIP21.11■□□□□ 0.977e-18■■■□□ 16.8
PHGDH-210ENST00000641115 GALTP07902 379 aa21.11■□□□□ 0.97
PHGDH-210ENST00000641115 BCAR1P56945 870 aa21.11■□□□□ 0.97
PHGDH-210ENST00000641115 FMO1Q01740 532 aa21.11■□□□□ 0.97
PHGDH-210ENST00000641115 CYP27A1Q02318 531 aa21.11■□□□□ 0.97
PHGDH-210ENST00000641115 SPOUT1Q5T280 376 aaKnown RBP21.11■□□□□ 0.97
PHGDH-210ENST00000641115 LNX1Q8TBB1 728 aaPredicted RBP21.11■□□□□ 0.97
PHGDH-210ENST00000641115 ZNF606Q8WXB4 792 aa21.11■□□□□ 0.97
PHGDH-210ENST00000641115 HEXIM2Q96MH2 286 aaKnown RBP21.11■□□□□ 0.97
PHGDH-210ENST00000641115 CWH43Q9H720 699 aa21.11■□□□□ 0.97
PHGDH-210ENST00000641115 CXXC1Q9P0U4 656 aaPredicted RBP21.11■□□□□ 0.97
PHGDH-210ENST00000641115 NAGPAQ9UK23 515 aa21.11■□□□□ 0.97
PHGDH-210ENST00000641115 KIAA1257Q9ULG3 409 aa21.11■□□□□ 0.97
PHGDH-210ENST00000641115 GJB5O95377 273 aa21.11■□□□□ 0.97
PHGDH-210ENST00000641115 VDRP11473 427 aa21.11■□□□□ 0.97
PHGDH-210ENST00000641115 CHRNB2P17787 502 aa21.11■□□□□ 0.97
PHGDH-210ENST00000641115 BRD2P25440 801 aaKnown RBP21.11■□□□□ 0.97
PHGDH-210ENST00000641115 SLC30A5Q8TAD4 765 aa21.11■□□□□ 0.97
PHGDH-210ENST00000641115 TNIP3Q96KP6 325 aa21.11■□□□□ 0.97
PHGDH-210ENST00000641115 ZBED2Q9BTP6 218 aa21.11■□□□□ 0.97
PHGDH-210ENST00000641115 PCDHB8Q9UN66 801 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms