RNA–Protein interactions for RNA: ENST00000640717.1

SPIN3-243, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-243ENST00000640717 NXF3Q9H4D5 531 aaKnown RBP13.52□□□□□ -0.24
SPIN3-243ENST00000640717 VIPAS39Q9H9C1 493 aa13.52□□□□□ -0.24
SPIN3-243ENST00000640717 PRDM4Q9UKN5 801 aa13.52□□□□□ -0.24
SPIN3-243ENST00000640717 SNX9Q9Y5X1 595 aa13.52□□□□□ -0.24
SPIN3-243ENST00000640717 CCDC66A2RUB6 948 aa13.52□□□□□ -0.25
SPIN3-243ENST00000640717 M0QYV0 167 aa13.52□□□□□ -0.25
SPIN3-243ENST00000640717 TULP2O00295 520 aa13.52□□□□□ -0.25
SPIN3-243ENST00000640717 TREHO43280 583 aa13.52□□□□□ -0.25
SPIN3-243ENST00000640717 PPFIA4O75335 1185 aa13.52□□□□□ -0.25
SPIN3-243ENST00000640717 CTSHP09668 335 aa13.52□□□□□ -0.25
SPIN3-243ENST00000640717 RFC1P35251 1148 aaPredicted RBP13.52□□□□□ -0.25
SPIN3-243ENST00000640717 AARSP49588 968 aaKnown RBP eCLIP13.52□□□□□ -0.25
SPIN3-243ENST00000640717 NRLP54845 237 aa13.52□□□□□ -0.25
SPIN3-243ENST00000640717 TAF5Q15542 800 aa13.52□□□□□ -0.25
SPIN3-243ENST00000640717 PTPN20Q4JDL3 420 aa13.52□□□□□ -0.25
SPIN3-243ENST00000640717 SH3PXD2AQ5TCZ1 1133 aa13.52□□□□□ -0.25
SPIN3-243ENST00000640717 ILDR2Q71H61 639 aa13.52□□□□□ -0.25
SPIN3-243ENST00000640717 GSTA5Q7RTV2 222 aa13.52□□□□□ -0.25
SPIN3-243ENST00000640717 VTI1AQ96AJ9 217 aa13.52□□□□□ -0.25
SPIN3-243ENST00000640717 HPDLQ96IR7 371 aa13.52□□□□□ -0.25
SPIN3-243ENST00000640717 PIWIL1Q96J94 861 aaKnown RBP13.52□□□□□ -0.25
SPIN3-243ENST00000640717 PARK7Q99497 189 aaKnown RBP13.52□□□□□ -0.25
SPIN3-243ENST00000640717 KATNBL1Q9H079 304 aa13.52□□□□□ -0.25
SPIN3-243ENST00000640717 SEMA4AQ9H3S1 761 aa13.52□□□□□ -0.25
SPIN3-243ENST00000640717 TUBGCP4Q9UGJ1 667 aa13.52□□□□□ -0.25
SPIN3-243ENST00000640717 LRRD1A4D1F6 860 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 TSPAN1O60635 241 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 PHF2O75151 1096 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 IFNB1P01574 187 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 COILP38432 576 aaPredicted RBP13.51□□□□□ -0.25
SPIN3-243ENST00000640717 RABGGTBP53611 331 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 KRT17Q04695 432 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 DGKDQ16760 1214 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 KRT71Q3SY84 523 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 IQCKQ8N0W5 287 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 GLIS1Q8NBF1 620 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 CAVIN3Q969G5 261 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 ZMAT2Q96NC0 199 aaKnown RBP13.51□□□□□ -0.25
SPIN3-243ENST00000640717 RPS6KC1Q96S38 1066 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 CPXM1Q96SM3 734 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 ELOVL4Q9GZR5 314 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 RNF39Q9H2S5 420 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 SLITRK6Q9H5Y7 841 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 PRMT7Q9NVM4 692 aaPredicted RBP13.51□□□□□ -0.25
SPIN3-243ENST00000640717 MTUS1Q9ULD2 1270 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 TNFSF13BQ9Y275 285 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 PIAS1O75925 651 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 ACSL3O95573 720 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 CYP2C9P11712 490 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 PSMC1P62191 440 aaKnown RBP13.51□□□□□ -0.25
SPIN3-243ENST00000640717 GNGT1P63211 74 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 CCDC38Q502W7 563 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 TLK2Q86UE8 772 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 RAPGEF5Q92565 580 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 NAP1L3Q99457 506 aaPredicted RBP13.51□□□□□ -0.25
SPIN3-243ENST00000640717 VTA1Q9NP79 307 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 PARP2Q9UGN5 583 aa13.51□□□□□ -0.25
SPIN3-243ENST00000640717 PIN4Q9Y237 131 aaKnown RBP13.51□□□□□ -0.25
SPIN3-243ENST00000640717 KIAA0391O15091 583 aaKnown RBP13.5□□□□□ -0.25
SPIN3-243ENST00000640717 KRT1P04264 644 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 ZNF252P-AS1Q0IIN9 211 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 TMEM132DQ14C87 1099 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 ZSCAN26Q16670 478 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 DUSP28Q4G0W2 176 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 FAM47CQ5HY64 1035 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 ACOT1Q86TX2 421 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 FEZF2Q8TBJ5 459 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 ACAP3Q96P50 834 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 JPH2Q9BR39 696 aaPredicted RBP13.5□□□□□ -0.25
SPIN3-243ENST00000640717 ARHGAP39Q9C0H5 1083 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 RSPH14Q9UHP6 348 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 CES2O00748 559 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 PROSCO94903 275 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 SMIM10L2AP0DMW4 78 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 SMIM10L2BP0DMW5 78 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 PROZP22891 400 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 ATP11AP98196 1134 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 NFX1Q12986 1120 aaKnown RBP13.5□□□□□ -0.25
SPIN3-243ENST00000640717 ZNF484Q5JVG2 852 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 MFSD7Q6UXD7 560 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 TMC3Q7Z5M5 1100 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 TMEM35BQ8NCS4 154 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 SHCBP1Q8NEM2 672 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 WHAMMQ8TF30 809 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 EXOC4Q96A65 974 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 DDX27Q96GQ7 796 aaKnown RBP13.5□□□□□ -0.25
SPIN3-243ENST00000640717 ABHD16BQ9H3Z7 469 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 METTL5Q9NRN9 209 aaKnown RBP13.5□□□□□ -0.25
SPIN3-243ENST00000640717 NOVA2Q9UNW9 492 aaKnown RBP13.5□□□□□ -0.25
SPIN3-243ENST00000640717 PGK1P00558 417 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 C6orf222P0C671 652 aaPredicted RBP13.5□□□□□ -0.25
SPIN3-243ENST00000640717 MMP8P22894 467 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 PTGIRP43119 386 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 SLC26A2P50443 739 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 NDST1P52848 882 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 PTP4A2Q12974 167 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 SIX1Q15475 284 aaPredicted RBP13.5□□□□□ -0.25
SPIN3-243ENST00000640717 ZNF618Q5T7W0 954 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 RNF169Q8NCN4 708 aa13.5□□□□□ -0.25
SPIN3-243ENST00000640717 HSPH1Q92598 858 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms