RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 PPP4R3CPQ6ZMV5 832 aa12.57□□□□□ -0.4
MECP2-226ENST00000640414 USP49Q70CQ1 688 aa12.57□□□□□ -0.4
MECP2-226ENST00000640414 ARID3BQ8IVW6 561 aaPredicted RBP12.57□□□□□ -0.4
MECP2-226ENST00000640414 GPT2Q8TD30 523 aa12.57□□□□□ -0.4
MECP2-226ENST00000640414 DYDC2Q96IM9 177 aa12.57□□□□□ -0.4
MECP2-226ENST00000640414 PRIMPOLQ96LW4 560 aa12.57□□□□□ -0.4
MECP2-226ENST00000640414 PPP1R10Q96QC0 940 aaKnown RBP12.57□□□□□ -0.4
MECP2-226ENST00000640414 HHIPQ96QV1 700 aa12.57□□□□□ -0.4
MECP2-226ENST00000640414 TMEM209Q96SK2 561 aa12.57□□□□□ -0.4
MECP2-226ENST00000640414 ASH1LQ9NR48 2969 aaKnown RBP12.57□□□□□ -0.4
MECP2-226ENST00000640414 FBXL5Q9UKA1 691 aa12.57□□□□□ -0.4
MECP2-226ENST00000640414 NUP205Q92621 2012 aa12.56□□□□□ -0.4
MECP2-226ENST00000640414 FXR2P51116 673 aaKnown RBP eCLIP12.56□□□□□ -0.44e-7■□□□□ 8.9
MECP2-226ENST00000640414 CYP4A11Q02928 519 aa12.56□□□□□ -0.4
MECP2-226ENST00000640414 TMEM196Q5HYL7 178 aa12.56□□□□□ -0.4
MECP2-226ENST00000640414 RESP18Q5W5W9 173 aa12.56□□□□□ -0.4
MECP2-226ENST00000640414 HAUS6Q7Z4H7 955 aa12.56□□□□□ -0.4
MECP2-226ENST00000640414 SLFN12Q8IYM2 578 aa12.56□□□□□ -0.4
MECP2-226ENST00000640414 FSIP1Q8NA03 581 aa12.56□□□□□ -0.4
MECP2-226ENST00000640414 EPSTI1Q96J88 318 aa12.56□□□□□ -0.4
MECP2-226ENST00000640414 UROC1Q96N76 676 aa12.56□□□□□ -0.4
MECP2-226ENST00000640414 MKNK1Q9BUB5 465 aa12.56□□□□□ -0.4
MECP2-226ENST00000640414 LRRC3Q9BY71 257 aa12.56□□□□□ -0.4
MECP2-226ENST00000640414 FZD8Q9H461 694 aa12.56□□□□□ -0.4
MECP2-226ENST00000640414 GOLPH3LQ9H4A5 285 aa12.56□□□□□ -0.4
MECP2-226ENST00000640414 ZSWIM4Q9H7M6 989 aa12.56□□□□□ -0.4
MECP2-226ENST00000640414 TTC12Q9H892 705 aaPredicted RBP12.56□□□□□ -0.4
MECP2-226ENST00000640414 PRMT7Q9NVM4 692 aaPredicted RBP12.56□□□□□ -0.4
MECP2-226ENST00000640414 ANKFY1Q9P2R3 1169 aa12.56□□□□□ -0.4
MECP2-226ENST00000640414 PCDHA12Q9UN75 941 aa12.56□□□□□ -0.4
MECP2-226ENST00000640414 GDAQ9Y2T3 454 aa12.56□□□□□ -0.4
MECP2-226ENST00000640414 LOC400499M0QZD8 3231 aa12.56□□□□□ -0.4
MECP2-226ENST00000640414 IGSF10Q6WRI0 2623 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 A0A1B0GVL5 298 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 SPAARA0A1B0GVQ0 90 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 FAM221BA6H8Z2 402 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 LRRIQ4A6NIV6 560 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 N4BP3O15049 544 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 MEFVO15553 781 aaPredicted RBP12.55□□□□□ -0.4
MECP2-226ENST00000640414 RNF40O75150 1001 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 DGAT1O75907 488 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 LIG1P18858 919 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 PTMSP20962 102 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 CDC25AP30304 524 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 GBP1P32455 592 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 LONP1P36776 959 aaKnown RBP12.55□□□□□ -0.4
MECP2-226ENST00000640414 IRX4P78413 519 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 CACNB1Q02641 598 aaPredicted RBP12.55□□□□□ -0.4
MECP2-226ENST00000640414 SOX4Q06945 474 aaPredicted RBP12.55□□□□□ -0.4
MECP2-226ENST00000640414 MRPL58Q14197 206 aaKnown RBP12.55□□□□□ -0.4
MECP2-226ENST00000640414 PDIA5Q14554 519 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 KARSQ15046 597 aaKnown RBP12.55□□□□□ -0.4
MECP2-226ENST00000640414 ITPRIPL2Q3MIP1 535 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 TMC8Q8IU68 726 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 TPH2Q8IWU9 490 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 IGSF22Q8N9C0 903 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 CHFRQ96EP1 664 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 POLR3FQ9H1D9 316 aaPredicted RBP12.55□□□□□ -0.4
MECP2-226ENST00000640414 AFF4Q9UHB7 1163 aaKnown RBP12.55□□□□□ -0.4
MECP2-226ENST00000640414 USP20Q9Y2K6 914 aa12.55□□□□□ -0.4
MECP2-226ENST00000640414 NUP210Q8TEM1 1887 aaPredicted RBP12.55□□□□□ -0.4
MECP2-226ENST00000640414 FAM237AA0A1B0GTK4 181 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 PP2D1A8MPX8 630 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 H7C4K7 107 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 DPYSL4O14531 572 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 SYN3O14994 580 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 TRAK2O60296 914 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 SLITRK3O94933 977 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 NDUFA8P51970 172 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 SIM1P81133 766 aaPredicted RBP12.54□□□□□ -0.4
MECP2-226ENST00000640414 FAM187BQ17R55 369 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 CTXN3Q4LDR2 81 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 EEF1DP3Q658K8 133 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 PMS2CLQ68D20 193 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 NCAPH2Q6IBW4 605 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 ENGASEQ8NFI3 743 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 ADAM32Q8TC27 787 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 PANK2Q9BZ23 570 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 SLC32A1Q9H598 525 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 GPRC5CQ9NQ84 441 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 LRWD1Q9UFC0 647 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 INVSQ9Y283 1065 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 YIPF1Q9Y548 306 aa12.54□□□□□ -0.4
MECP2-226ENST00000640414 SMG1Q96Q15 3661 aaKnown RBP12.54□□□□□ -0.4
MECP2-226ENST00000640414 ATG2BQ96BY7 2078 aa12.53□□□□□ -0.4
MECP2-226ENST00000640414 ASCC3Q8N3C0 2202 aaKnown RBP12.53□□□□□ -0.4
MECP2-226ENST00000640414 PRAMEF12O95522 483 aa12.53□□□□□ -0.4
MECP2-226ENST00000640414 EGFP01133 1207 aa12.53□□□□□ -0.4
MECP2-226ENST00000640414 EDN1P05305 212 aa12.53□□□□□ -0.4
MECP2-226ENST00000640414 PFKFB1P16118 471 aa12.53□□□□□ -0.4
MECP2-226ENST00000640414 PLCB2Q00722 1185 aa12.53□□□□□ -0.4
MECP2-226ENST00000640414 SCAPQ12770 1279 aa12.53□□□□□ -0.4
MECP2-226ENST00000640414 GRSF1Q12849 480 aaKnown RBP eCLIP12.53□□□□□ -0.4
MECP2-226ENST00000640414 PRPF4BQ13523 1007 aaKnown RBP12.53□□□□□ -0.4
MECP2-226ENST00000640414 TMEM132AQ24JP5 1023 aa12.53□□□□□ -0.4
MECP2-226ENST00000640414 CDCA2Q69YH5 1023 aaPredicted RBP12.53□□□□□ -0.4
MECP2-226ENST00000640414 RNF19BQ6ZMZ0 732 aa12.53□□□□□ -0.4
MECP2-226ENST00000640414 CHCHD4Q8N4Q1 142 aa12.53□□□□□ -0.4
MECP2-226ENST00000640414 BPIFB1Q8TDL5 484 aa12.53□□□□□ -0.4
MECP2-226ENST00000640414 AK8Q96MA6 479 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms