RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 MLLT6P55198 1093 aaPredicted RBP16.29■□□□□ 0.2
SYNE2-228ENST00000639659 HMGN5P82970 282 aaKnown RBP16.29■□□□□ 0.2
SYNE2-228ENST00000639659 IL17AQ16552 155 aa16.29■□□□□ 0.2
SYNE2-228ENST00000639659 SLC39A12Q504Y0 691 aa16.29■□□□□ 0.2
SYNE2-228ENST00000639659 PKN3Q6P5Z2 889 aa16.29■□□□□ 0.2
SYNE2-228ENST00000639659 WDR5BQ86VZ2 330 aa16.29■□□□□ 0.2
SYNE2-228ENST00000639659 BPIFB1Q8TDL5 484 aa16.29■□□□□ 0.2
SYNE2-228ENST00000639659 GIPC2Q8TF65 315 aa16.29■□□□□ 0.2
SYNE2-228ENST00000639659 PSMG2Q969U7 264 aa16.29■□□□□ 0.2
SYNE2-228ENST00000639659 LLPHQ9BRT6 129 aaKnown RBP16.29■□□□□ 0.2
SYNE2-228ENST00000639659 MMTAG2Q9BU76 263 aaKnown RBP16.29■□□□□ 0.2
SYNE2-228ENST00000639659 MKNK1Q9BUB5 465 aa16.29■□□□□ 0.2
SYNE2-228ENST00000639659 OXCT2Q9BYC2 517 aaPredicted RBP16.29■□□□□ 0.2
SYNE2-228ENST00000639659 SMOC1Q9H4F8 434 aa16.29■□□□□ 0.2
SYNE2-228ENST00000639659 PLEKHA5Q9HAU0 1116 aa16.29■□□□□ 0.2
SYNE2-228ENST00000639659 ASB3Q9Y575 518 aa16.29■□□□□ 0.2
SYNE2-228ENST00000639659 CHD8Q9HCK8 2581 aa16.29■□□□□ 0.2
SYNE2-228ENST00000639659 K7ENM7 598 aa16.28■□□□□ 0.2
SYNE2-228ENST00000639659 RPP40O75818 363 aaKnown RBP16.28■□□□□ 0.2
SYNE2-228ENST00000639659 PAPSS2O95340 614 aaPredicted RBP16.28■□□□□ 0.2
SYNE2-228ENST00000639659 FGF19O95750 216 aa16.28■□□□□ 0.2
SYNE2-228ENST00000639659 MYBPC2Q14324 1141 aa16.28■□□□□ 0.2
SYNE2-228ENST00000639659 DHX8Q14562 1220 aaKnown RBP16.28■□□□□ 0.2
SYNE2-228ENST00000639659 ENOX2Q16206 610 aaKnown RBP16.28■□□□□ 0.2
SYNE2-228ENST00000639659 ITPRIPL2Q3MIP1 535 aa16.28■□□□□ 0.2
SYNE2-228ENST00000639659 MCTP1Q6DN14 999 aa16.28■□□□□ 0.2
SYNE2-228ENST00000639659 JADE1Q6IE81 842 aa16.28■□□□□ 0.2
SYNE2-228ENST00000639659 SENP8Q96LD8 212 aa16.28■□□□□ 0.2
SYNE2-228ENST00000639659 THG1LQ9NWX6 298 aaKnown RBP16.28■□□□□ 0.2
SYNE2-228ENST00000639659 SLC8A2Q9UPR5 921 aa16.28■□□□□ 0.2
SYNE2-228ENST00000639659 TSC2P49815 1807 aa16.28■□□□□ 0.2
SYNE2-228ENST00000639659 ATG2BQ96BY7 2078 aa16.27■□□□□ 0.2
SYNE2-228ENST00000639659 PLA2G4BP0C869 781 aa16.27■□□□□ 0.2
SYNE2-228ENST00000639659 TYMPP19971 482 aa16.27■□□□□ 0.2
SYNE2-228ENST00000639659 CYP3A5P20815 502 aa16.27■□□□□ 0.2
SYNE2-228ENST00000639659 AARSP49588 968 aaKnown RBP eCLIP16.27■□□□□ 0.2
SYNE2-228ENST00000639659 MCM2P49736 904 aa16.27■□□□□ 0.2
SYNE2-228ENST00000639659 PLCB2Q00722 1185 aa16.27■□□□□ 0.2
SYNE2-228ENST00000639659 CCINQ13939 588 aa16.27■□□□□ 0.2
SYNE2-228ENST00000639659 KBTBD6Q86V97 674 aa16.27■□□□□ 0.2
SYNE2-228ENST00000639659 OR10T2Q8NGX3 314 aa16.27■□□□□ 0.2
SYNE2-228ENST00000639659 DDX1Q92499 740 aaKnown RBP16.27■□□□□ 0.2
SYNE2-228ENST00000639659 PNMA5Q96PV4 448 aa16.27■□□□□ 0.2
SYNE2-228ENST00000639659 NTPCRQ9BSD7 190 aaKnown RBP16.27■□□□□ 0.2
SYNE2-228ENST00000639659 MSTO1Q9BUK6 570 aa16.27■□□□□ 0.2
SYNE2-228ENST00000639659 ZHX3Q9H4I2 956 aa16.27■□□□□ 0.2
SYNE2-228ENST00000639659 TASP1Q9H6P5 420 aa16.27■□□□□ 0.2
SYNE2-228ENST00000639659 RXFP3Q9NSD7 469 aa16.27■□□□□ 0.2
SYNE2-228ENST00000639659 ANGPTL2Q9UKU9 493 aa16.27■□□□□ 0.2
SYNE2-228ENST00000639659 GREB1Q4ZG55 1949 aa16.27■□□□□ 0.19
SYNE2-228ENST00000639659 VWA3AA6NCI4 1184 aa16.26■□□□□ 0.19
SYNE2-228ENST00000639659 H0YCG3 227 aa16.26■□□□□ 0.19
SYNE2-228ENST00000639659 LAD1O00515 517 aa16.26■□□□□ 0.19
SYNE2-228ENST00000639659 FOXD2O60548 495 aaPredicted RBP16.26■□□□□ 0.19
SYNE2-228ENST00000639659 NFICP08651 508 aa16.26■□□□□ 0.19
SYNE2-228ENST00000639659 ATF6P18850 670 aa16.26■□□□□ 0.19
SYNE2-228ENST00000639659 CDC25CP30307 473 aa16.26■□□□□ 0.19
SYNE2-228ENST00000639659 NMT1P30419 496 aaKnown RBP16.26■□□□□ 0.19
SYNE2-228ENST00000639659 LILRA4P59901 499 aa16.26■□□□□ 0.19
SYNE2-228ENST00000639659 ZBTB6Q15916 424 aa16.26■□□□□ 0.19
SYNE2-228ENST00000639659 N4BP2L1Q5TBK1 243 aaPredicted RBP16.26■□□□□ 0.19
SYNE2-228ENST00000639659 TRIM68Q6AZZ1 485 aa16.26■□□□□ 0.19
SYNE2-228ENST00000639659 SYT2Q8N9I0 419 aaPredicted RBP16.26■□□□□ 0.19
SYNE2-228ENST00000639659 STKLD1Q8NE28 680 aa16.26■□□□□ 0.19
SYNE2-228ENST00000639659 GAB3Q8WWW8 586 aa16.26■□□□□ 0.19
SYNE2-228ENST00000639659 EBF3Q9H4W6 596 aa16.26■□□□□ 0.19
SYNE2-228ENST00000639659 GKN1Q9NS71 199 aa16.26■□□□□ 0.19
SYNE2-228ENST00000639659 POLR3BQ9NW08 1133 aaPredicted RBP16.26■□□□□ 0.19
SYNE2-228ENST00000639659 OBP2AQ9NY56 170 aa16.26■□□□□ 0.19
SYNE2-228ENST00000639659 ABI2Q9NYB9 513 aaPredicted RBP16.26■□□□□ 0.19
SYNE2-228ENST00000639659 LARSQ9P2J5 1176 aaKnown RBP16.26■□□□□ 0.19
SYNE2-228ENST00000639659 KCNG1Q9UIX4 513 aa16.26■□□□□ 0.19
SYNE2-228ENST00000639659 TCHHQ07283 1943 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 SPAG17Q6Q759 2223 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 OGTO15294 1046 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 FAM13AO94988 1023 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 KRT18P05783 430 aaKnown RBP16.25■□□□□ 0.19
SYNE2-228ENST00000639659 NEFLP07196 543 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 U2AF2P26368 475 aaKnown RBP eCLIP16.25■□□□□ 0.19
SYNE2-228ENST00000639659 AVPR1AP37288 418 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 PRPHP41219 470 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 TUFMP49411 452 aaKnown RBP16.25■□□□□ 0.19
SYNE2-228ENST00000639659 SLC12A3P55017 1021 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 NCKAP1LP55160 1127 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 GRSF1Q12849 480 aaKnown RBP eCLIP16.25■□□□□ 0.19
SYNE2-228ENST00000639659 BFSP1Q12934 665 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 TMEM132DQ14C87 1099 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 PTPAQ15257 358 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 SPATA1Q5VX52 437 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 C9orf57Q5W0N0 161 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 CACNA2D4Q7Z3S7 1137 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 GPBP1Q86WP2 473 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 METTL23Q86XA0 190 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 SYNPOQ8N3V7 929 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 MYCT1Q8N699 235 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 MAB21L3Q8N8X9 362 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 HHIPQ96QV1 700 aa16.25■□□□□ 0.19
SYNE2-228ENST00000639659 PYM1Q9BRP8 204 aaKnown RBP16.25■□□□□ 0.19
SYNE2-228ENST00000639659 MAGED2Q9UNF1 606 aaPredicted RBP16.25■□□□□ 0.19
SYNE2-228ENST00000639659 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms