RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 SEZ6Q53EL9 994 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 MCPH1Q8NEM0 835 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 WNK4Q96J92 1243 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 DCP1AQ9NPI6 582 aaPredicted RBP17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 CCR4P51679 360 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 TP53BP2Q13625 1128 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 CNGA3Q16281 694 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 ZSWIM7Q19AV6 140 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 SIRT2Q8IXJ6 389 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 BTBD9Q96Q07 612 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 PANX2Q96RD6 677 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 ROGDIQ9GZN7 287 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 SPRTNQ9H040 489 aaPredicted RBP17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 KLHL1Q9NR64 748 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 PRKCBP05771 671 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 CPA2P48052 419 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 USP6P35125 1406 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 TSPAN3O60637 253 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 P4HBP07237 508 aaKnown RBP17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 MID2Q9UJV3 735 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 PPP4R3CPQ6ZMV5 832 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 B3GALNT2Q8NCR0 500 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 PPP1R13LQ8WUF5 828 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 COPS7BQ9H9Q2 264 aaPredicted RBP17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 DBR1Q9UK59 544 aaKnown RBP17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 POLR1DQ9Y2S0 133 aa17.75■□□□□ 0.43
CACNA1A-253ENST00000637927 SCARF1Q14162 830 aa17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 SH3TC2Q8TF17 1288 aa17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 MIR1-1HGQ9H1L0 117 aa17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 CNOT10Q9H9A5 744 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 CYP26B1Q9NR63 512 aa17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 CNOT7Q9UIV1 285 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 KDM5CP41229 1560 aa17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 IRAK1BP1Q5VVH5 260 aa17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 RNF19BQ6ZMZ0 732 aa17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 LDHDQ86WU2 507 aa17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 CDC42BPGQ6DT37 1551 aa17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 ZNF500O60304 480 aaPredicted RBP17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 CDK17Q00537 523 aa17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 CUL4AQ13619 759 aa17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 SARM1Q6SZW1 724 aa17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 RCOR1Q9UKL0 485 aa17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 BRINP3Q76B58 766 aa17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 CDH18Q13634 790 aa17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 SH3GL2Q99962 352 aa17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 TBC1D22BQ9NU19 505 aa17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 COQ6Q9Y2Z9 468 aa17.74■□□□□ 0.43
CACNA1A-253ENST00000637927 SCAMP3O14828 347 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 ARFIP2P53365 341 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 SCRN3Q0VDG4 424 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 DSG4Q86SJ6 1040 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 OR8H2Q8N162 312 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 HDHD2Q9H0R4 259 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 JPH1Q9HDC5 661 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 AXIN2Q9Y2T1 843 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 ARF4P18085 180 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 LLGL2Q6P1M3 1020 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 CYP4X1Q8N118 509 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 TMEM60Q9H2L4 133 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 TRIM43BA6NCK2 446 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 HAUS5O94927 633 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 EGFRP00533 1210 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 STIP1P31948 543 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 SNAP47Q5SQN1 464 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 BLOC1S5Q8TDH9 187 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 OLFM1Q99784 485 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 STAP1Q9ULZ2 295 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 CFAP74Q9C0B2 1584 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 PPP1R2P3Q6NXS1 205 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 SH3GL3Q99963 347 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 TUT1Q9H6E5 874 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 SATB2Q9UPW6 733 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 IZUMO1Q8IYV9 350 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 CIPCQ9C0C6 399 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 ACTR5Q9H9F9 607 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 TRPC4Q9UBN4 977 aa17.73■□□□□ 0.43
CACNA1A-253ENST00000637927 PIPSLA2A3N6 862 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 CELF2O95319 508 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 UBTFL6P0CB48 400 aaPredicted RBP17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 MYBL1P10243 752 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 NUP62P37198 522 aaPredicted RBP17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 TAF13Q15543 124 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 DCAF6Q58WW2 860 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 DGKKQ5KSL6 1271 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 YME1L1Q96TA2 773 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 C2orf40Q9H1Z8 148 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 SYNGAP1Q96PV0 1343 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 ATMINO43313 823 aaPredicted RBP17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 AP1G2O75843 785 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 NECTIN1Q15223 517 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 GSTA3Q16772 222 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 CCDC137Q6PK04 289 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 MACC1Q6ZN28 852 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 KRT33AO76009 404 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 RHOBTB1O94844 696 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 MCEEQ96PE7 176 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 STAU1O95793 577 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 CLK1P49759 484 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 MAP3K10Q02779 954 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 ANGEL2Q5VTE6 544 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms