RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 PPM1LQ5SGD2 360 aa16.82■□□□□ 0.28
CLN5-208ENST00000636183 CDHR2Q9BYE9 1310 aa16.82■□□□□ 0.28
CLN5-208ENST00000636183 PDZK1P1A8MUH7 402 aa16.82■□□□□ 0.28
CLN5-208ENST00000636183 POMCP01189 267 aa16.82■□□□□ 0.28
CLN5-208ENST00000636183 FYNP06241 537 aa16.82■□□□□ 0.28
CLN5-208ENST00000636183 EFEMP1Q12805 493 aa16.82■□□□□ 0.28
CLN5-208ENST00000636183 COMMD2Q86X83 199 aa16.82■□□□□ 0.28
CLN5-208ENST00000636183 CLYBLQ8N0X4 340 aa16.82■□□□□ 0.28
CLN5-208ENST00000636183 RBBP8NLQ8NC74 664 aaPredicted RBP16.82■□□□□ 0.28
CLN5-208ENST00000636183 FGFR2P21802 821 aa16.82■□□□□ 0.28
CLN5-208ENST00000636183 PTPAQ15257 358 aa16.82■□□□□ 0.28
CLN5-208ENST00000636183 KIAA1324Q6UXG2 1013 aaKnown RBP16.82■□□□□ 0.28
CLN5-208ENST00000636183 FAM162AQ96A26 154 aa16.82■□□□□ 0.28
CLN5-208ENST00000636183 DNAJC1Q96KC8 554 aaKnown RBP16.82■□□□□ 0.28
CLN5-208ENST00000636183 TASP1Q9H6P5 420 aa16.82■□□□□ 0.28
CLN5-208ENST00000636183 DBR1Q9UK59 544 aaKnown RBP16.82■□□□□ 0.28
CLN5-208ENST00000636183 PBRM1Q86U86 1689 aa16.82■□□□□ 0.28
CLN5-208ENST00000636183 PRR29P0C7W0 189 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 GRK3P35626 688 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 USE1Q9NZ43 259 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 SCNN1BP51168 640 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 EIF3BP55884 814 aaKnown RBP16.81■□□□□ 0.28
CLN5-208ENST00000636183 MAPRE1Q15691 268 aaKnown RBP16.81■□□□□ 0.28
CLN5-208ENST00000636183 C12orf60Q5U649 245 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 WNT8AQ9H1J5 351 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 ACO1P21399 889 aaKnown RBP16.81■□□□□ 0.28
CLN5-208ENST00000636183 CUL3Q13618 768 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 ITIH5Q86UX2 942 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 ERO1BQ86YB8 467 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 DIS3LQ8TF46 1054 aaKnown RBP16.81■□□□□ 0.28
CLN5-208ENST00000636183 SPIRE2Q8WWL2 714 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 AGPAT1Q99943 283 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 RAB6BQ9NRW1 208 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 TDRKHQ9Y2W6 561 aaKnown RBP16.81■□□□□ 0.28
CLN5-208ENST00000636183 PMPCBO75439 489 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 PCNAP12004 261 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 PRKAA1Q13131 559 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 RABGAP1LQ5R372 815 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 MMGT1Q8N4V1 131 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 SLC16A10Q8TF71 515 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 HPS3Q969F9 1004 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 SNF8Q96H20 258 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 GSG1L2A8MUP6 293 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 IGKV5-2P06315 115 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 GCLCP48506 637 aaPredicted RBP16.81■□□□□ 0.28
CLN5-208ENST00000636183 OCA2Q04671 838 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 NCAPHQ15003 741 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 SMTNL2Q2TAL5 461 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 CENPTQ96BT3 561 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 ABCG4Q9H172 646 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 METTL5Q9NRN9 209 aaKnown RBP16.81■□□□□ 0.28
CLN5-208ENST00000636183 CYB561D2O14569 222 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 PSMA3P25788 255 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 PMS1P54277 932 aaKnown RBP16.81■□□□□ 0.28
CLN5-208ENST00000636183 SNRNP35Q16560 246 aaKnown RBP16.81■□□□□ 0.28
CLN5-208ENST00000636183 MTHFD1LQ6UB35 978 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 HERC6Q8IVU3 1022 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 KAT2BQ92831 832 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 BCL2L12Q9HB09 334 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 PITPNM2Q9BZ72 1349 aa16.81■□□□□ 0.28
CLN5-208ENST00000636183 TSPAN3O60637 253 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 CDC27P30260 824 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 ZNF543Q08ER8 600 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 EXD1Q8NHP7 514 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 NSUN4Q96CB9 384 aaKnown RBP16.8■□□□□ 0.28
CLN5-208ENST00000636183 AK9Q5TCS8 1911 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 H0Y3Z8 333 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 CYTH3O43739 400 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 NT5C2P49902 561 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 HLA-DQA1Q5Y7H0 255 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 NCF1BA6NI72 391 aaPredicted RBP16.8■□□□□ 0.28
CLN5-208ENST00000636183 NCF1CA8MVU1 366 aaPredicted RBP16.8■□□□□ 0.28
CLN5-208ENST00000636183 MMEP08473 750 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 NCF1P14598 390 aaPredicted RBP16.8■□□□□ 0.28
CLN5-208ENST00000636183 NR1D1P20393 614 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 YWHAZP63104 245 aaKnown RBP16.8■□□□□ 0.28
CLN5-208ENST00000636183 CAV1Q03135 178 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 DNMT1P26358 1616 aaKnown RBP16.8■□□□□ 0.28
CLN5-208ENST00000636183 F8W810 466 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 AP3B1O00203 1094 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 DEPDC1Q5TB30 811 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 RBM23Q86U06 439 aaKnown RBP16.8■□□□□ 0.28
CLN5-208ENST00000636183 PI4K2AQ9BTU6 479 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 HTATIP2Q9BUP3 242 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 FAM96AQ9H5X1 160 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 PVALEFA0A1B0GWK0 134 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 SLC12A8A0AV02 714 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 CHI3L1P36222 383 aaPredicted RBP16.8■□□□□ 0.28
CLN5-208ENST00000636183 PMS2P54278 862 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 ABCE1P61221 599 aaKnown RBP16.8■□□□□ 0.28
CLN5-208ENST00000636183 TEDDM1Q5T9Z0 273 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 CCDC137Q6PK04 289 aaKnown RBP16.8■□□□□ 0.28
CLN5-208ENST00000636183 SOHLH2Q9NX45 425 aa16.8■□□□□ 0.28
CLN5-208ENST00000636183 NPC1L1Q9UHC9 1359 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 M0QYT0 321 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 EPHB2P29323 1055 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 FAM136AQ96C01 138 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 OXCT2Q9BYC2 517 aaPredicted RBP16.79■□□□□ 0.28
CLN5-208ENST00000636183 ADNPQ9H2P0 1102 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 DDIT4Q9NX09 232 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms