RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 HPS3Q969F9 1004 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 FOXQ1Q9C009 403 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 TRIM9Q9C026 710 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 GPR88Q9GZN0 384 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 PCIF1Q9H4Z3 704 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 ASB3Q9Y575 518 aa13.07□□□□□ -0.32
UBR1-212ENST00000627960 DENND4CQ5VZ89 1909 aa13.06□□□□□ -0.32
UBR1-212ENST00000627960 TULP1O00294 542 aaPredicted RBP13.06□□□□□ -0.32
UBR1-212ENST00000627960 KIAA0391O15091 583 aaKnown RBP13.06□□□□□ -0.32
UBR1-212ENST00000627960 GFRA3O60609 400 aa13.06□□□□□ -0.32
UBR1-212ENST00000627960 LRRN2O75325 713 aa13.06□□□□□ -0.32
UBR1-212ENST00000627960 POLR2BP30876 1174 aaKnown RBP13.06□□□□□ -0.32
UBR1-212ENST00000627960 HOXD13P35453 343 aa13.06□□□□□ -0.32
UBR1-212ENST00000627960 TUFMP49411 452 aaKnown RBP13.06□□□□□ -0.32
UBR1-212ENST00000627960 ATL3Q6DD88 541 aa13.06□□□□□ -0.32
UBR1-212ENST00000627960 FRMD5Q7Z6J6 570 aa13.06□□□□□ -0.32
UBR1-212ENST00000627960 DNAJB7Q7Z6W7 309 aaPredicted RBP13.06□□□□□ -0.32
UBR1-212ENST00000627960 GPD1LQ8N335 351 aa13.06□□□□□ -0.32
UBR1-212ENST00000627960 TTC9BQ8N6N2 239 aa13.06□□□□□ -0.32
UBR1-212ENST00000627960 C1orf127Q8N9H9 656 aa13.06□□□□□ -0.32
UBR1-212ENST00000627960 ZNF507Q8TCN5 953 aa13.06□□□□□ -0.32
UBR1-212ENST00000627960 KCNG4Q8TDN1 519 aa13.06□□□□□ -0.32
UBR1-212ENST00000627960 C2orf15Q8WU43 125 aaKnown RBP13.06□□□□□ -0.32
UBR1-212ENST00000627960 PSMG2Q969U7 264 aa13.06□□□□□ -0.32
UBR1-212ENST00000627960 ZNF560Q96MR9 790 aa13.06□□□□□ -0.32
UBR1-212ENST00000627960 C7orf25Q9BPX7 421 aa13.06□□□□□ -0.32
UBR1-212ENST00000627960 TRPV4Q9HBA0 871 aa13.06□□□□□ -0.32
UBR1-212ENST00000627960 PDE11AQ9HCR9 933 aa13.06□□□□□ -0.32
UBR1-212ENST00000627960 PCDHA7Q9UN72 937 aa13.06□□□□□ -0.32
UBR1-212ENST00000627960 AGAP1Q9UPQ3 857 aa13.06□□□□□ -0.32
UBR1-212ENST00000627960 NUP210Q8TEM1 1887 aaPredicted RBP13.06□□□□□ -0.32
UBR1-212ENST00000627960 TICRRQ7Z2Z1 1910 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 FANCMQ8IYD8 2048 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 PATJQ8NI35 1801 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 A0A1W2PRU2 124 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 POLR2DO15514 142 aaKnown RBP13.05□□□□□ -0.32
UBR1-212ENST00000627960 SOAT2O75908 522 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 ITGB3P05106 788 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 GLULP15104 373 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 PSMC3P17980 439 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 VIPR2P41587 438 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 ME1P48163 572 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 ASIC1P78348 528 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 SMARCB1Q12824 385 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 PKP1Q13835 747 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 GRM2Q14416 872 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 SCARA3Q6AZY7 606 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 VITQ6UXI7 678 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 EPM2AIP1Q7L775 607 aaPredicted RBP13.05□□□□□ -0.32
UBR1-212ENST00000627960 ITIH5Q86UX2 942 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 LRRTM3Q86VH5 581 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 DCP1BQ8IZD4 617 aaKnown RBP13.05□□□□□ -0.32
UBR1-212ENST00000627960 CXorf38Q8TB03 319 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 ZSCAN18Q8TBC5 510 aaPredicted RBP13.05□□□□□ -0.32
UBR1-212ENST00000627960 NOC3LQ8WTT2 800 aaKnown RBP13.05□□□□□ -0.32
UBR1-212ENST00000627960 DNASE1L2Q92874 299 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 TRMT61BQ9BVS5 477 aaKnown RBP13.05□□□□□ -0.32
UBR1-212ENST00000627960 OSBPL6Q9BZF3 934 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 MAGEF1Q9HAY2 307 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 ZNF334Q9HCZ1 680 aaPredicted RBP13.05□□□□□ -0.32
UBR1-212ENST00000627960 LTB4R2Q9NPC1 389 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 ITGA11Q9UKX5 1188 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 CFAP45Q9UL16 551 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 MTF2Q9Y483 593 aaPredicted RBP13.05□□□□□ -0.32
UBR1-212ENST00000627960 USP34Q70CQ2 3546 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 COL4A2P08572 1712 aa13.05□□□□□ -0.32
UBR1-212ENST00000627960 RIF1Q5UIP0 2472 aaKnown RBP13.04□□□□□ -0.32
UBR1-212ENST00000627960 ZNF233A6NK53 670 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 FAM170BA6NMN3 283 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 EIF3DO15371 548 aaKnown RBP eCLIP13.04□□□□□ -0.32
UBR1-212ENST00000627960 FGF19O95750 216 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 HAPLN1P10915 354 aaPredicted RBP13.04□□□□□ -0.32
UBR1-212ENST00000627960 CD72P21854 359 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 RBP5P82980 135 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 UBXN2BQ14CS0 331 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 MGAT5BQ3V5L5 792 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 FAM26FQ5R3K3 315 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 RESP18Q5W5W9 173 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 TPRG1Q6ZUI0 275 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 UNC13DQ70J99 1090 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 GAREM2Q75VX8 874 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 ASCL5Q7RTU5 278 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 C1orf210Q8IVY1 113 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 MFSD6LQ8IWD5 586 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 PDCL2Q8N4E4 241 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 CSGALNACT2Q8N6G5 542 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 LRRC52Q8N7C0 313 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 SPRYD3Q8NCJ5 442 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 SPPL2BQ8TCT7 592 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 DEPDC1BQ8WUY9 529 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 IRF7Q92985 503 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 E2F7Q96AV8 911 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 FAM84AQ96KN4 292 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 NELL2Q99435 816 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 SEPT5Q99719 369 aaPredicted RBP13.04□□□□□ -0.32
UBR1-212ENST00000627960 LPIN3Q9BQK8 851 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 SLITRK6Q9H5Y7 841 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 BRD9Q9H8M2 597 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 HEBP1Q9NRV9 189 aa13.04□□□□□ -0.32
UBR1-212ENST00000627960 FAM13BQ9NYF5 915 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms