RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 ATICP31939 592 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 FMO5P49326 533 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 MCCD1P59942 119 aaPredicted RBP15.8■□□□□ 0.12
PNKP-221ENST00000627317 MYL6P60660 151 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 MAN2A1Q16706 1144 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 CBWD6Q4V339 395 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 CBWD3Q5JTY5 395 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 CBWD5Q5RIA9 395 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 CDKAL1Q5VV42 579 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 C15orf39Q6ZRI6 1047 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 C12orf76Q8N812 135 aaPredicted RBP15.8■□□□□ 0.12
PNKP-221ENST00000627317 CCDC150Q8NCX0 1101 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 APPL2Q8NEU8 664 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 ANKRD20A12PQ8NF67 263 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 TAS1R2Q8TE23 839 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 PIK3R5Q8WYR1 880 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 SENP8Q96LD8 212 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 CBX8Q9HC52 389 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 FNIP2Q9P278 1114 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 PCDHB8Q9UN66 801 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 PES1O00541 588 aaKnown RBP15.79■□□□□ 0.12
PNKP-221ENST00000627317 CYB561D2O14569 222 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 VNN1O95497 513 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 CST3P01034 146 aaPredicted RBP15.79■□□□□ 0.12
PNKP-221ENST00000627317 ADH1AP07327 375 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 TPM2P07951 284 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 PRKCSHP14314 528 aaPredicted RBP15.79■□□□□ 0.12
PNKP-221ENST00000627317 FGFR3P22607 806 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 KLRC2P26717 231 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 TKTP29401 623 aaKnown RBP15.79■□□□□ 0.12
PNKP-221ENST00000627317 TNNC1P63316 161 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 TPM4P67936 248 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 CETN1Q12798 172 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 KCNH2Q12809 1159 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 NCAPHQ15003 741 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 TCP11X2Q5H9J9 407 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 RARS2Q5T160 578 aaKnown RBP15.79■□□□□ 0.12
PNKP-221ENST00000627317 SCARA3Q6AZY7 606 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 PDXDC1Q6P996 788 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 LILRA6Q6PI73 481 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 DHX40Q8IX18 779 aaKnown RBP15.79■□□□□ 0.12
PNKP-221ENST00000627317 FBXL13Q8NEE6 735 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 CMASQ8NFW8 434 aaPredicted RBP15.79■□□□□ 0.12
PNKP-221ENST00000627317 FAM200AQ8TCP9 573 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 RIN2Q8WYP3 895 aaPredicted RBP15.79■□□□□ 0.12
PNKP-221ENST00000627317 TUBGCP2Q9BSJ2 902 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 POMKQ9H5K3 350 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 SFXN1Q9H9B4 322 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.79■□□□□ 0.12
PNKP-221ENST00000627317 SNX9Q9Y5X1 595 aa15.79■□□□□ 0.12
PNKP-221ENST00000627317 M0QZQ0 153 aa15.78■□□□□ 0.12
PNKP-221ENST00000627317 HUS1O60921 280 aa15.78■□□□□ 0.12
PNKP-221ENST00000627317 STAU1O95793 577 aaKnown RBP15.78■□□□□ 0.12
PNKP-221ENST00000627317 P4HA1P13674 534 aa15.78■□□□□ 0.12
PNKP-221ENST00000627317 CDK11BP21127 795 aaKnown RBP15.78■□□□□ 0.12
PNKP-221ENST00000627317 ZNF445P59923 1031 aa15.78■□□□□ 0.12
PNKP-221ENST00000627317 CREMQ03060 361 aa15.78■□□□□ 0.12
PNKP-221ENST00000627317 SGSM1Q2NKQ1 1148 aa15.78■□□□□ 0.12
PNKP-221ENST00000627317 ZNF667Q5HYK9 610 aa15.78■□□□□ 0.12
PNKP-221ENST00000627317 PRSS55Q6UWB4 352 aaPredicted RBP15.78■□□□□ 0.12
PNKP-221ENST00000627317 METTL23Q86XA0 190 aa15.78■□□□□ 0.12
PNKP-221ENST00000627317 RNF135Q8IUD6 432 aa15.78■□□□□ 0.12
PNKP-221ENST00000627317 LNX1Q8TBB1 728 aaPredicted RBP15.78■□□□□ 0.12
PNKP-221ENST00000627317 TAF4BQ92750 862 aa15.78■□□□□ 0.12
PNKP-221ENST00000627317 NECTIN4Q96NY8 510 aa15.78■□□□□ 0.12
PNKP-221ENST00000627317 C1QTNF1Q9BXJ1 281 aa15.78■□□□□ 0.12
PNKP-221ENST00000627317 RHOBTB2Q9BYZ6 727 aa15.78■□□□□ 0.12
PNKP-221ENST00000627317 XYLT2Q9H1B5 865 aa15.78■□□□□ 0.12
PNKP-221ENST00000627317 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.78■□□□□ 0.122e-7■■■■■ 93.2
PNKP-221ENST00000627317 MAN1C1Q9NR34 630 aa15.78■□□□□ 0.12
PNKP-221ENST00000627317 TAB2Q9NYJ8 693 aa15.78■□□□□ 0.12
PNKP-221ENST00000627317 NXF1Q9UBU9 619 aaKnown RBP15.78■□□□□ 0.12
PNKP-221ENST00000627317 DSEQ9UL01 958 aa15.78■□□□□ 0.12
PNKP-221ENST00000627317 VWA8A3KMH1 1905 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 GOLGA6L19H0YKK7 550 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 P4HA2O15460 535 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 TGM5O43548 720 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 DCXO43602 365 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 GLUD1P00367 558 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 ASS1P00966 412 aaKnown RBP15.77■□□□□ 0.12
PNKP-221ENST00000627317 WEE2P0C1S8 567 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 RPL17P18621 184 aaKnown RBP15.77■□□□□ 0.12
PNKP-221ENST00000627317 TYMPP19971 482 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 NOP14P78316 857 aaKnown RBP15.77■□□□□ 0.12
PNKP-221ENST00000627317 YWHAHQ04917 246 aaPredicted RBP15.77■□□□□ 0.12
PNKP-221ENST00000627317 IQCB1Q15051 598 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 KRT31Q15323 416 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 PSMD5Q16401 504 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 WDR72Q3MJ13 1102 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 WDR44Q5JSH3 913 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 VARS2Q5ST30 1063 aaKnown RBP15.77■□□□□ 0.12
PNKP-221ENST00000627317 ZNF280DQ6N043 979 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 TMC5Q6UXY8 1006 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 ANKS3Q6ZW76 656 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 GPR149Q86SP6 731 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 LUZP1Q86V48 1076 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 MMS19Q96T76 1030 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 CLSTN3Q9BQT9 956 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 PI4K2AQ9BTU6 479 aa15.77■□□□□ 0.12
PNKP-221ENST00000627317 VRTNQ9H8Y1 702 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms