RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 ABCB10Q9NRK6 738 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 ZNF222Q9UK12 451 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 PCDH11XQ9BZA7 1347 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 K7ERI5 159 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 M0QYV0 167 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 FSBPO95073 299 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 RAG1P15918 1043 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 ALOX15P16050 662 aaPredicted RBP12.09□□□□□ -0.47
CLTC-215ENST00000621829 ELF3P78545 371 aaPredicted RBP12.09□□□□□ -0.47
CLTC-215ENST00000621829 DCAF4L1Q3SXM0 396 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 FAM102AQ5T9C2 384 aaPredicted RBP12.09□□□□□ -0.47
CLTC-215ENST00000621829 ARMCX2Q7L311 632 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 NDUFAF2Q8N183 169 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 RAD54LQ92698 747 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 ZNF408Q9H9D4 720 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 KLHL3Q9UH77 587 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 GRID1Q9ULK0 1009 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 SH3GLB1Q9Y371 365 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 ATP8B3O60423 1300 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 ZBTB46Q86UZ6 589 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 HPS3Q969F9 1004 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 A0A1W2PRG6 482 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 AVPR1AP37288 418 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 KCNQ4P56696 695 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 TYW3Q6IPR3 259 aaKnown RBP12.09□□□□□ -0.47
CLTC-215ENST00000621829 RMDN1Q96DB5 314 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 RNFT2Q96EX2 444 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 COPG2Q9UBF2 871 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 CCDC28BQ9BUN5 200 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 BTBD3Q9Y2F9 522 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 NUP160Q12769 1436 aa12.09□□□□□ -0.47
CLTC-215ENST00000621829 CYP2D7A0A087X1C5 515 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 TSPAN4O14817 238 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 PCP11498 1178 aaKnown RBP12.08□□□□□ -0.48
CLTC-215ENST00000621829 POU1F1P28069 291 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 OTUD3Q5T2D3 398 aaPredicted RBP12.08□□□□□ -0.48
CLTC-215ENST00000621829 UBE2Q1Q7Z7E8 422 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 MMGT1Q8N4V1 131 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 PTPRN2Q92932 1015 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 CYP26A1O43174 497 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 GSSP48637 474 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 NRF1Q16656 503 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 WASHC2DQ5SRD0 308 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 TADA1Q96BN2 335 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 PP2D1A8MPX8 630 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 CNOT3O75175 753 aaKnown RBP12.08□□□□□ -0.48
CLTC-215ENST00000621829 AQP5P55064 265 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 TRMT5Q32P41 509 aaKnown RBP12.08□□□□□ -0.48
CLTC-215ENST00000621829 PARP10Q53GL7 1025 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 FAM45AQ8TCE6 357 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 MLPHQ9BV36 600 aaPredicted RBP12.08□□□□□ -0.48
CLTC-215ENST00000621829 TMEM117Q9H0C3 514 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 PCDH11YQ9BZA8 1340 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 GCC2Q8IWJ2 1684 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 O00370 1275 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 LRPAP1P30533 357 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 RGS2P41220 211 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 IRGCQ6NXR0 463 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 RCOR2Q8IZ40 523 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 SCFD1Q8WVM8 642 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 SP110Q9HB58 689 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 RPRD1BQ9NQG5 326 aaKnown RBP12.08□□□□□ -0.48
CLTC-215ENST00000621829 HBS1LQ9Y450 684 aaKnown RBP12.08□□□□□ -0.48
CLTC-215ENST00000621829 GRIN2BQ13224 1484 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 QARSP47897 775 aaKnown RBP12.08□□□□□ -0.48
CLTC-215ENST00000621829 CCNHP51946 323 aaPredicted RBP12.08□□□□□ -0.48
CLTC-215ENST00000621829 ZNF667Q5HYK9 610 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 OSCARQ8IYS5 282 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 SEMA6AQ9H2E6 1030 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 NCKAP5LQ9HCH0 1330 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 SERPIND1P05546 499 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 HOXB7P09629 217 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 SERPINB9P50453 376 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 METTL16Q86W50 562 aaKnown RBP12.08□□□□□ -0.48
CLTC-215ENST00000621829 APOL4Q9BPW4 351 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 MROH7Q68CQ1 1323 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 THRAP10827 490 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 RFX1P22670 979 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 GALCP54803 685 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 APPL2Q8NEU8 664 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 ARHGEF26Q96DR7 871 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 TRIM54Q9BYV2 358 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 EFCAB1Q9HAE3 211 aa12.08□□□□□ -0.48
CLTC-215ENST00000621829 E9PBE3 544 aa12.07□□□□□ -0.48
CLTC-215ENST00000621829 ANXA13P27216 316 aa12.07□□□□□ -0.48
CLTC-215ENST00000621829 HOXA7P31268 230 aaPredicted RBP12.07□□□□□ -0.48
CLTC-215ENST00000621829 MYBPC2Q14324 1141 aa12.07□□□□□ -0.48
CLTC-215ENST00000621829 SHROOM1Q2M3G4 852 aaPredicted RBP12.07□□□□□ -0.48
CLTC-215ENST00000621829 ITPRIPL1Q6GPH6 555 aa12.07□□□□□ -0.48
CLTC-215ENST00000621829 RBM44Q6ZP01 1051 aaKnown RBP12.07□□□□□ -0.48
CLTC-215ENST00000621829 NLRP10Q86W26 655 aa12.07□□□□□ -0.48
CLTC-215ENST00000621829 BTBD10Q9BSF8 475 aa12.07□□□□□ -0.48
CLTC-215ENST00000621829 CD274Q9NZQ7 290 aa12.07□□□□□ -0.48
CLTC-215ENST00000621829 PGM3O95394 542 aa12.07□□□□□ -0.48
CLTC-215ENST00000621829 GHRP10912 638 aa12.07□□□□□ -0.48
CLTC-215ENST00000621829 SDC4P31431 198 aa12.07□□□□□ -0.48
CLTC-215ENST00000621829 CHRNB3Q05901 458 aa12.07□□□□□ -0.48
CLTC-215ENST00000621829 UBE3CQ15386 1083 aa12.07□□□□□ -0.48
CLTC-215ENST00000621829 STK32AQ8WU08 396 aa12.07□□□□□ -0.48
CLTC-215ENST00000621829 TBATAQ96M53 351 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms