RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 POLIQ9UNA4 740 aa15.36■□□□□ 0.05
CBWD3-217ENST00000621474 COG5Q9UP83 839 aa15.36■□□□□ 0.05
CBWD3-217ENST00000621474 H7C4K7 107 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 HUS1O60921 280 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 PIK3CAP42336 1068 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 FMO5P49326 533 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 HSP90AA4PQ58FG1 418 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 ANKRD54Q6NXT1 300 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 EP400NLQ6ZTU2 488 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 DPH6Q7L8W6 267 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 ADGRF2Q8IZF7 708 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 TMEM86AQ8N2M4 240 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 SMRP1Q8NCR6 262 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 FBXL13Q8NEE6 735 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 ZNF461Q8TAF7 563 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 CASP10Q92851 521 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 SDCBP2Q9H190 292 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 S1PR5Q9H228 398 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 HSD3B7Q9H2F3 369 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 THAP9Q9H5L6 903 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.35■□□□□ 0.05
CBWD3-217ENST00000621474 MAN1C1Q9NR34 630 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 NXF1Q9UBU9 619 aaKnown RBP15.35■□□□□ 0.05
CBWD3-217ENST00000621474 NFE2L3Q9Y4A8 694 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 ARHGEF37A1IGU5 675 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 PMM2O15305 246 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 PAPLNO95428 1278 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 FGFR1OPO95684 399 aaKnown RBP15.35■□□□□ 0.05
CBWD3-217ENST00000621474 CCDC192P0DO97 292 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 LMO2P25791 158 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 ASPAP45381 313 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 NOP14P78316 857 aaKnown RBP15.35■□□□□ 0.05
CBWD3-217ENST00000621474 KCNH2Q12809 1159 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 NCAPHQ15003 741 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 CCDC142Q17RM4 750 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 SGSM1Q2NKQ1 1148 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 SKOR2Q2VWA4 1001 aaPredicted RBP15.35■□□□□ 0.05
CBWD3-217ENST00000621474 LRRTM3Q86VH5 581 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.35■□□□□ 0.05
CBWD3-217ENST00000621474 LMO3Q8TAP4 145 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 PKMYT1Q99640 499 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 MRPL45Q9BRJ2 306 aaKnown RBP15.35■□□□□ 0.05
CBWD3-217ENST00000621474 SMYD3Q9H7B4 428 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 RAB20Q9NX57 234 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 THEGQ9P2T0 379 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 CDH22Q9UJ99 828 aa15.35■□□□□ 0.05
CBWD3-217ENST00000621474 R3HCC1Q9Y3T6 440 aaKnown RBP15.35■□□□□ 0.05
CBWD3-217ENST00000621474 DENND4AQ7Z401 1863 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 NOTCH4Q99466 2003 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 TCF20Q9UGU0 1960 aaKnown RBP15.34■□□□□ 0.05
CBWD3-217ENST00000621474 OR6C75A6NL08 312 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 STX10O60499 249 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 TACC1O75410 805 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 RFPL2O75678 378 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 ATF2P15336 505 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 CDH8P55286 799 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 CLUL1Q15846 466 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 ZSCAN23Q3MJ62 389 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 LEXMQ3ZCV2 418 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 ANO6Q4KMQ2 910 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 ZNF667Q5HYK9 610 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 CDKAL1Q5VV42 579 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 RNF19BQ6ZMZ0 732 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 C12orf76Q8N812 135 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-217ENST00000621474 KREMEN2Q8NCW0 462 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 SPATA18Q8TC71 538 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 TAF4BQ92750 862 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 MMS19Q96T76 1030 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 OXCT2Q9BYC2 517 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-217ENST00000621474 ZCWPW1Q9H0M4 648 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 CRISPLD1Q9H336 500 aa15.34■□□□□ 0.05
CBWD3-217ENST00000621474 DDX43Q9NXZ2 648 aaKnown RBP15.34■□□□□ 0.05
CBWD3-217ENST00000621474 SEC24AO95486 1093 aa15.33■□□□□ 0.04
CBWD3-217ENST00000621474 WARSP23381 471 aaKnown RBP15.33■□□□□ 0.04
CBWD3-217ENST00000621474 ACAT1P24752 427 aaKnown RBP15.33■□□□□ 0.04
CBWD3-217ENST00000621474 RAP1GAPP47736 663 aa15.33■□□□□ 0.04
CBWD3-217ENST00000621474 KCNQ1P51787 676 aa15.33■□□□□ 0.04
CBWD3-217ENST00000621474 CDR1P51861 262 aa15.33■□□□□ 0.04
CBWD3-217ENST00000621474 ARPP19P56211 112 aa15.33■□□□□ 0.04
CBWD3-217ENST00000621474 TNNC1P63316 161 aa15.33■□□□□ 0.04
CBWD3-217ENST00000621474 GPR17Q13304 367 aa15.33■□□□□ 0.04
CBWD3-217ENST00000621474 TPD52L1Q16890 204 aaPredicted RBP15.33■□□□□ 0.04
CBWD3-217ENST00000621474 MIIPQ5JXC2 388 aa15.33■□□□□ 0.04
CBWD3-217ENST00000621474 METTL23Q86XA0 190 aa15.33■□□□□ 0.04
CBWD3-217ENST00000621474 ACBD6Q9BR61 282 aa15.33■□□□□ 0.04
CBWD3-217ENST00000621474 BCO2Q9BYV7 579 aa15.33■□□□□ 0.04
CBWD3-217ENST00000621474 PLEKHA4Q9H4M7 779 aa15.33■□□□□ 0.04
CBWD3-217ENST00000621474 TMLHEQ9NVH6 421 aa15.33■□□□□ 0.04
CBWD3-217ENST00000621474 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.33■□□□□ 0.04
CBWD3-217ENST00000621474 MTMR11A4FU01 709 aa15.32■□□□□ 0.04
CBWD3-217ENST00000621474 GRXCR2A6NFK2 248 aa15.32■□□□□ 0.04
CBWD3-217ENST00000621474 LETM1O95202 739 aaPredicted RBP15.32■□□□□ 0.04
CBWD3-217ENST00000621474 CPB1P15086 417 aa15.32■□□□□ 0.04
CBWD3-217ENST00000621474 LHX1P48742 406 aa15.32■□□□□ 0.04
CBWD3-217ENST00000621474 MYL7Q01449 175 aa15.32■□□□□ 0.04
CBWD3-217ENST00000621474 SCARA5Q6ZMJ2 495 aa15.32■□□□□ 0.04
CBWD3-217ENST00000621474 TTC9BQ8N6N2 239 aa15.32■□□□□ 0.04
CBWD3-217ENST00000621474 HDAC7Q8WUI4 952 aa15.32■□□□□ 0.04
CBWD3-217ENST00000621474 PGLYRP2Q96PD5 576 aa15.32■□□□□ 0.04
CBWD3-217ENST00000621474 APOL5Q9BWW9 433 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms