RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 LPAR1Q92633 364 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 ASIC4Q96FT7 647 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 MKNK1Q9BUB5 465 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 HOMER3Q9NSC5 361 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 TLK1Q9UKI8 766 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 TIMM13Q9Y5L4 95 aaPredicted RBP8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 IGLV3-22A0A075B6J6 115 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 CHN1P15882 459 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 GPC5P78333 572 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 MAPK7Q13164 816 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 ARL13BQ3SXY8 428 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 MMEL1Q495T6 779 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 MIB1Q86YT6 1006 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 P3H4Q92791 437 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 PABPC5Q96DU9 382 aaKnown RBP8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 CDCA5Q96FF9 252 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 SENP7Q9BQF6 1050 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 CD248Q9HCU0 757 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 ABI2Q9NYB9 513 aaPredicted RBP8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 SEL1LQ9UBV2 794 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 SMCHD1A6NHR9 2005 aa8.72□□□□□ -1.01
PTPDC1-204ENST00000620992 C19orf81C9J6K1 198 aa8.71□□□□□ -1.01
PTPDC1-204ENST00000620992 PEX10O60683 326 aa8.71□□□□□ -1.01
PTPDC1-204ENST00000620992 PSMD10O75832 226 aa8.71□□□□□ -1.01
PTPDC1-204ENST00000620992 CIB2O75838 187 aa8.71□□□□□ -1.01
PTPDC1-204ENST00000620992 EIF3BP55884 814 aaKnown RBP8.71□□□□□ -1.01
PTPDC1-204ENST00000620992 AP1B1Q10567 949 aa8.71□□□□□ -1.01
PTPDC1-204ENST00000620992 PPP2R5EQ16537 467 aa8.71□□□□□ -1.01
PTPDC1-204ENST00000620992 GJC2Q5T442 439 aaPredicted RBP8.71□□□□□ -1.01
PTPDC1-204ENST00000620992 BTBD8Q5XKL5 378 aa8.71□□□□□ -1.01
PTPDC1-204ENST00000620992 GMCL1P1Q8NEA9 526 aa8.71□□□□□ -1.01
PTPDC1-204ENST00000620992 GRK7Q8WTQ7 553 aa8.71□□□□□ -1.01
PTPDC1-204ENST00000620992 FAF2Q96CS3 445 aa8.71□□□□□ -1.01
PTPDC1-204ENST00000620992 RMDN1Q96DB5 314 aa8.71□□□□□ -1.01
PTPDC1-204ENST00000620992 NCAPGQ9BPX3 1015 aa8.71□□□□□ -1.01
PTPDC1-204ENST00000620992 SEMA4AQ9H3S1 761 aa8.71□□□□□ -1.01
PTPDC1-204ENST00000620992 INTS9Q9NV88 658 aaKnown RBP8.71□□□□□ -1.01
PTPDC1-204ENST00000620992 TRIM17Q9Y577 477 aa8.71□□□□□ -1.01
PTPDC1-204ENST00000620992 SYNGAP1Q96PV0 1343 aa8.71□□□□□ -1.01
PTPDC1-204ENST00000620992 UBA6A0AVT1 1052 aaPredicted RBP8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 TTC36A6NLP5 189 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 DFFAO00273 331 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 SPTLC1O15269 473 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 CFLARO15519 480 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 ZNF286BP0CG31 522 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 CDH6P55285 790 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 ACTN3Q08043 901 aaPredicted RBP8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 PRAMEF19Q5SWL8 479 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 TATDN1Q6P1N9 297 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 GLB1LQ6UWU2 654 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 CNPY4Q8N129 248 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 AFAP1L2Q8N4X5 818 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 ATP11CQ8NB49 1132 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 FBXL13Q8NEE6 735 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 BORCS6Q96GS4 357 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 FSD1LQ9BXM9 530 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 KLC4Q9NSK0 619 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 EXOC1LA0A1B0GW35 172 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 FSBPO95073 299 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 SGPL1O95470 568 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 GH1P01241 217 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 CLTAP09496 248 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 CA4P22748 312 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 MSH2P43246 934 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 SESN2P58004 480 aaPredicted RBP8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 IFI35P80217 286 aaPredicted RBP8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 PPATQ06203 517 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 PPP3CAQ08209 521 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 ASPHQ12797 758 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 RRP1BQ14684 758 aaKnown RBP8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 DLK2Q6UY11 383 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 PDIK1LQ8N165 341 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 PPFIBP2Q8ND30 876 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 AGBL3Q8NEM8 1001 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 CFAP61Q8NHU2 1237 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 EPS8L3Q8TE67 593 aaKnown RBP8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 PYROXD1Q8WU10 500 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 XPO6Q96QU8 1125 aaKnown RBP8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 NUDCD1Q96RS6 583 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 PABPC3Q9H361 631 aaKnown RBP8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 SMARCAD1Q9H4L7 1026 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 SLC8A2Q9UPR5 921 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 NHSQ6T4R5 1651 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 NCANO14594 1321 aa8.71□□□□□ -1.02
PTPDC1-204ENST00000620992 ZC3H11AO75152 810 aaKnown RBP eCLIP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 ZWINTO95229 277 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 RPS12P25398 132 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 RWDD2BP57060 319 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 TGFB2P61812 414 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 SMTNL2Q2TAL5 461 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 FAM47EQ6ZV65 393 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 CPNE8Q86YQ8 564 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 SUGP1Q8IWZ8 645 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 SCYL3Q8IZE3 742 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 EFHBQ8N7U6 833 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 C1orf131Q8NDD1 294 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 SLC17A8Q8NDX2 589 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 ZSWIM2Q8NEG5 633 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 ATP8B4Q8TF62 1192 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 CNOT10Q9H9A5 744 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms