RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 SERPINB13Q9UIV8 391 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 FARP1Q9Y4F1 1045 aaPredicted RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 GCC2Q8IWJ2 1684 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 PVALEFA0A1B0GWK0 134 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 PRAMEF22A3QJZ6 481 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 KIAA0391O15091 583 aaKnown RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 ALOX5P09917 674 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 CALB2P22676 271 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 POU5F1BQ06416 359 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 SCRN1Q12765 414 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 KDM7AQ6ZMT4 941 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 CYP4Z1Q86W10 505 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 KSR1Q8IVT5 923 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 ZNF564Q8TBZ8 553 aaPredicted RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 ANKRD7Q92527 254 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 HPS3Q969F9 1004 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 ZNF577Q9BSK1 485 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 C20orf96Q9NUD7 363 aaPredicted RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 KDM5AP29375 1690 aaKnown RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 WDR19Q8NEZ3 1342 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 MYO3BQ8WXR4 1341 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 CCDC195A0A1B0GUA6 201 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 PI4K2BG5E9Z4 385 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 TAF4O00268 1085 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 KATNA1O75449 491 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 PCCAP05165 728 aaPredicted RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 FAM58BPP0C7Q3 252 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 NQO1P15559 274 aaKnown RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 NCALDP61601 193 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 DSTYKQ6XUX3 929 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 COL23A1Q86Y22 540 aaPredicted RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 THEM5Q8N1Q8 247 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 GIMAP8Q8ND71 665 aaPredicted RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 SPATA4Q8NEY3 305 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 PIGOQ8TEQ8 1089 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 HSPH1Q92598 858 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 FAM49AQ9H0Q0 323 aaPredicted RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 NEURL1BA8MQ27 555 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 F8VZ95 297 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 IDH3BO43837 385 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 ITGAXP20702 1163 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 MAPK1P28482 360 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 JAK3P52333 1124 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 C21orf59P57076 290 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 ELOA2Q8IYF1 753 aaPredicted RBP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 OR8H2Q8N162 312 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 ZNF786Q8N393 782 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 S100ZQ8WXG8 99 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 MAP4K1Q92918 833 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 PAGE5Q96GU1 130 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 B3GALT6Q96L58 329 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 HEXIM2Q96MH2 286 aaKnown RBP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 ZC3H7BQ9UGR2 993 aaKnown RBP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 STK36Q9NRP7 1315 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 MYO1GB0I1T2 1018 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 IGF2BP3O00425 579 aaKnown RBP eCLIP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 PRPF3O43395 683 aaKnown RBP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 TTLL1O95922 423 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 GYS2P54840 703 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 RAD51Q06609 339 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 WDR36Q8NI36 951 aaKnown RBP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 TMA16Q96EY4 203 aaKnown RBP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 NPHS2Q9NP85 383 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 ADAMTS1Q9UHI8 967 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 MAGED2Q9UNF1 606 aaPredicted RBP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 ABCC4O15439 1325 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 B2RBV5 119 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 ANKRD65E5RJM6 399 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 UBTFL6P0CB48 400 aaPredicted RBP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 CCND2P30279 289 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 SPRP35270 261 aaPredicted RBP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 SLC20A2Q08357 652 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 NFIXQ14938 502 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 CYFIP1Q7L576 1253 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 SSH3Q8TE77 659 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 TRIM39Q9HCM9 518 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 AVENQ9NQS1 362 aaPredicted RBP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 DYRK4Q9NR20 520 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 ERBB4Q15303 1308 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 ITIH6Q6UXX5 1313 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 KIF1BO60333 1816 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 MTSS1O43312 755 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 ENO3P13929 434 aaPredicted RBP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 HOXC8P31273 242 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 SDC4P31431 198 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 CRKP46108 304 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 ZNF667Q5HYK9 610 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 EFHC2Q5JST6 749 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 PRPF39Q86UA1 669 aaKnown RBP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 GATAD2AQ86YP4 633 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 STAG2Q8N3U4 1231 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 CLIC6Q96NY7 704 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 MYL10Q9BUA6 226 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 ZWILCHQ9H900 591 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 MFN2O95140 757 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 FKBP9O95302 570 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 S100A6P06703 90 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 IFNAR1P17181 557 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 PTPN5P54829 565 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms