RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 DEF6Q9H4E7 631 aa11.78□□□□□ -0.52
SNORD3D-201ENST00000619178 APOBEC3GQ9HC16 384 aaKnown RBP11.78□□□□□ -0.52
SNORD3D-201ENST00000619178 ABHD10Q9NUJ1 306 aa11.78□□□□□ -0.52
SNORD3D-201ENST00000619178 AIPL1Q9NZN9 384 aa11.78□□□□□ -0.52
SNORD3D-201ENST00000619178 CEP83Q9Y592 693 aa11.78□□□□□ -0.52
SNORD3D-201ENST00000619178 MRPL42Q9Y6G3 142 aaKnown RBP11.78□□□□□ -0.52
SNORD3D-201ENST00000619178 GREB1Q4ZG55 1949 aa11.78□□□□□ -0.52
SNORD3D-201ENST00000619178 LRRN2O75325 713 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 GFPT2O94808 682 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 WEE2P0C1S8 567 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 HNRNPH3P31942 346 aaKnown RBP11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 CYLC1P35663 651 aaPredicted RBP11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 FXR1P51114 621 aaKnown RBP eCLIP11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 SNX16P57768 344 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 CDK17Q00537 523 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 KLHL30Q0D2K2 578 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 SMARCB1Q12824 385 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 ARID5BQ14865 1188 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 SOWAHAQ2M3V2 549 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 TIGD5Q53EQ6 642 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 C9orf50Q5SZB4 431 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 FAM171A1Q5VUB5 890 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 CYP26C1Q6V0L0 522 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 CCDC186Q7Z3E2 898 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 DDX53Q86TM3 631 aaKnown RBP11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 TMTC1Q8IUR5 882 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 FAM71AQ8IYT1 594 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 DCP1BQ8IZD4 617 aaKnown RBP11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 SLC39A11Q8N1S5 342 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 RBBP8NLQ8NC74 664 aaPredicted RBP11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 TTPALQ9BTX7 342 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 CDH9Q9ULB4 789 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 POLIQ9UNA4 740 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 CNTN6Q9UQ52 1028 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 LZTS1Q9Y250 596 aa11.77□□□□□ -0.53
SNORD3D-201ENST00000619178 ATG2AQ2TAZ0 1938 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 COL4A4P53420 1690 aaPredicted RBP11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 OR6C75A6NL08 312 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 FOXN3O00409 490 aaPredicted RBP11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 PPEF2O14830 753 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 CILPO75339 1184 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 SOD2P04179 222 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 URODP06132 367 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 VDRP11473 427 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 GNA15P30679 374 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 CTNNB1P35222 781 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 BMPR1AP36894 532 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 PRKCIP41743 596 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 BRCC3P46736 316 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 ADKP55263 362 aaKnown RBP11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 PLCB3Q01970 1234 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 SGO2Q562F6 1265 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 PDE12Q6L8Q7 609 aaKnown RBP11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 GJB7Q6PEY0 223 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 TRIM72Q6ZMU5 477 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 LIMS2Q7Z4I7 341 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 CCDC170Q8IYT3 715 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 PDCL2Q8N4E4 241 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 TC2NQ8N9U0 490 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 MSANTD4Q8NCY6 345 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 C3orf58Q8NDZ4 430 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 HASPINQ8TF76 798 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 BAP1Q92560 729 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 TMEM176AQ96HP8 235 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 FAM84AQ96KN4 292 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 KREMEN1Q96MU8 473 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 TGS1Q96RS0 853 aaKnown RBP11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 BAG1Q99933 345 aaPredicted RBP11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 ACBD6Q9BR61 282 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 PAAF1Q9BRP4 392 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 SMYD3Q9H7B4 428 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 SLC28A3Q9HAS3 691 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 DDX43Q9NXZ2 648 aaKnown RBP11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 HESX1Q9UBX0 185 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 L1RE1Q9UN81 338 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 STXBP5LQ9Y2K9 1186 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 PLXNA3P51805 1871 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 DENND4CQ5VZ89 1909 aa11.76□□□□□ -0.53
SNORD3D-201ENST00000619178 SSU72P8A0A1W2PR75 194 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 C5orf67F2Z3F1 127 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 GABRDO14764 452 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 EPHB6O15197 1021 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 SPTLC1O15269 473 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 FGF18O76093 207 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 OAZ2O95190 189 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 CD19P15391 556 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 FGFR3P22607 806 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 GLUD2P49448 558 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 NDST1P52848 882 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 ARID5AQ03989 594 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 NFE2Q16621 373 aaPredicted RBP11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 MEA1Q16626 185 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 PTPN21Q16825 1174 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 WSCD1Q658N2 575 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 DPY19L2P1Q6NXN4 242 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 ELMSAN1Q6PJG2 1045 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 C4orf50Q6ZRC1 276 aa11.75□□□□□ -0.53
SNORD3D-201ENST00000619178 TMCO2Q7Z6W1 182 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms