RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 FAM81BQ96LP2 452 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 TFR2Q9UP52 801 aa17.37■□□□□ 0.37
SNAP47-213ENST00000617596 EPN1Q9Y6I3 576 aaPredicted RBP17.37■□□□□ 0.37
SNAP47-213ENST00000617596 ZBBXA8MT70 800 aa17.36■□□□□ 0.37
SNAP47-213ENST00000617596 ZNF263O14978 683 aa17.36■□□□□ 0.37
SNAP47-213ENST00000617596 AKR1B10O60218 316 aa17.36■□□□□ 0.37
SNAP47-213ENST00000617596 P4HA1P13674 534 aa17.36■□□□□ 0.37
SNAP47-213ENST00000617596 CYP11B1P15538 503 aa17.36■□□□□ 0.37
SNAP47-213ENST00000617596 PNPLA4P41247 253 aa17.36■□□□□ 0.37
SNAP47-213ENST00000617596 BRCC3P46736 316 aa17.36■□□□□ 0.37
SNAP47-213ENST00000617596 OR1G1P47890 313 aa17.36■□□□□ 0.37
SNAP47-213ENST00000617596 FPGSQ05932 587 aa17.36■□□□□ 0.37
SNAP47-213ENST00000617596 ASTE1Q2TB18 679 aaPredicted RBP17.36■□□□□ 0.37
SNAP47-213ENST00000617596 PALB2Q86YC2 1186 aa17.36■□□□□ 0.37
SNAP47-213ENST00000617596 GLYCTKQ8IVS8 523 aa17.36■□□□□ 0.37
SNAP47-213ENST00000617596 OLIG1Q8TAK6 271 aa17.36■□□□□ 0.37
SNAP47-213ENST00000617596 EPS8L1Q8TE68 723 aa17.36■□□□□ 0.37
SNAP47-213ENST00000617596 L1RE1Q9UN81 338 aa17.36■□□□□ 0.37
SNAP47-213ENST00000617596 PRG3Q9Y2Y8 225 aaPredicted RBP17.36■□□□□ 0.37
SNAP47-213ENST00000617596 NME7Q9Y5B8 376 aa17.36■□□□□ 0.37
SNAP47-213ENST00000617596 TIMM13Q9Y5L4 95 aaPredicted RBP17.36■□□□□ 0.37
SNAP47-213ENST00000617596 MICAL3Q7RTP6 2002 aa17.36■□□□□ 0.37
SNAP47-213ENST00000617596 A0A087X0T9 212 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 KIF4AO95239 1232 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 FAM228BP0C875 321 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 CDR1P51861 262 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 DSC1Q08554 894 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 MAPK8IP2Q13387 824 aaPredicted RBP17.35■□□□□ 0.37
SNAP47-213ENST00000617596 SV2CQ496J9 727 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 CD300LGQ6UXG3 332 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 COLGALT2Q8IYK4 626 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 WHAMMQ8TF30 809 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 FAM193BQ96PV7 902 aaPredicted RBP17.35■□□□□ 0.37
SNAP47-213ENST00000617596 HTATIP2Q9BUP3 242 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 NRDE2Q9H7Z3 1164 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 SEPT11Q9NVA2 429 aaKnown RBP17.35■□□□□ 0.37
SNAP47-213ENST00000617596 KANSL3Q9P2N6 904 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 PUF60Q9UHX1 559 aaKnown RBP17.35■□□□□ 0.37
SNAP47-213ENST00000617596 NOCTQ9UK39 431 aaKnown RBP17.35■□□□□ 0.37
SNAP47-213ENST00000617596 REXO2Q9Y3B8 237 aaKnown RBP17.35■□□□□ 0.37
SNAP47-213ENST00000617596 RANBP2P49792 3224 aaKnown RBP17.35■□□□□ 0.37
SNAP47-213ENST00000617596 DGKIO75912 1065 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 MMEP08473 750 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 CFHP08603 1231 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 RPL9P32969 192 aaKnown RBP17.35■□□□□ 0.37
SNAP47-213ENST00000617596 NDST1P52848 882 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 TIGD5Q53EQ6 642 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 LNX1Q8TBB1 728 aaPredicted RBP17.35■□□□□ 0.37
SNAP47-213ENST00000617596 TOP1MTQ969P6 601 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 JAKMIP2Q96AA8 810 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 SYT11Q9BT88 431 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 ELOVL4Q9GZR5 314 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 RASSF4Q9H2L5 321 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 CXXC1Q9P0U4 656 aaPredicted RBP17.35■□□□□ 0.37
SNAP47-213ENST00000617596 CNTN6Q9UQ52 1028 aa17.35■□□□□ 0.37
SNAP47-213ENST00000617596 TDRD15B5MCY1 1934 aaKnown RBP17.35■□□□□ 0.37
SNAP47-213ENST00000617596 SSU72P8A0A1W2PR75 194 aa17.34■□□□□ 0.37
SNAP47-213ENST00000617596 NT5C1B-RDH14C9J2C7 533 aa17.34■□□□□ 0.37
SNAP47-213ENST00000617596 DDX3XO00571 662 aaKnown RBP eCLIP17.34■□□□□ 0.371e-6■■■■□ 23.2
SNAP47-213ENST00000617596 CYB561D2O14569 222 aa17.34■□□□□ 0.37
SNAP47-213ENST00000617596 CILPO75339 1184 aa17.34■□□□□ 0.37
SNAP47-213ENST00000617596 FGBP02675 491 aa17.34■□□□□ 0.37
SNAP47-213ENST00000617596 AMHP03971 560 aa17.34■□□□□ 0.37
SNAP47-213ENST00000617596 PFKMP08237 780 aa17.34■□□□□ 0.37
SNAP47-213ENST00000617596 CHRNB2P17787 502 aa17.34■□□□□ 0.37
SNAP47-213ENST00000617596 ZNF132P52740 706 aa17.34■□□□□ 0.37
SNAP47-213ENST00000617596 PPIGQ13427 754 aaKnown RBP eCLIP17.34■□□□□ 0.371e-6■□□□□ 10.9
SNAP47-213ENST00000617596 KBTBD7Q8WVZ9 684 aa17.34■□□□□ 0.37
SNAP47-213ENST00000617596 SENP8Q96LD8 212 aa17.34■□□□□ 0.37
SNAP47-213ENST00000617596 AGPAT1Q99943 283 aa17.34■□□□□ 0.37
SNAP47-213ENST00000617596 LPIN3Q9BQK8 851 aa17.34■□□□□ 0.37
SNAP47-213ENST00000617596 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.34■□□□□ 0.377e-6■■■■□ 21.2
SNAP47-213ENST00000617596 CYP3A43Q9HB55 503 aa17.34■□□□□ 0.37
SNAP47-213ENST00000617596 GDAP2Q9NXN4 497 aa17.34■□□□□ 0.37
SNAP47-213ENST00000617596 ADGRG1Q9Y653 693 aa17.34■□□□□ 0.37
SNAP47-213ENST00000617596 BZW2Q9Y6E2 419 aaKnown RBP17.34■□□□□ 0.37
SNAP47-213ENST00000617596 EFCAB8A8MWE9 144 aa17.33■□□□□ 0.37
SNAP47-213ENST00000617596 TMCO5BA8MYB1 307 aa17.33■□□□□ 0.37
SNAP47-213ENST00000617596 HOXA2O43364 376 aa17.33■□□□□ 0.37
SNAP47-213ENST00000617596 HUS1O60921 280 aa17.33■□□□□ 0.37
SNAP47-213ENST00000617596 CCDC172P0C7W6 258 aa17.33■□□□□ 0.37
SNAP47-213ENST00000617596 BRD2P25440 801 aaKnown RBP17.33■□□□□ 0.37
SNAP47-213ENST00000617596 LMO2P25791 158 aa17.33■□□□□ 0.37
SNAP47-213ENST00000617596 GNA15P30679 374 aa17.33■□□□□ 0.37
SNAP47-213ENST00000617596 CYLC1P35663 651 aaPredicted RBP17.33■□□□□ 0.37
SNAP47-213ENST00000617596 PDE6CP51160 858 aa17.33■□□□□ 0.37
SNAP47-213ENST00000617596 RAD23BP54727 409 aa17.33■□□□□ 0.37
SNAP47-213ENST00000617596 WSCD1Q658N2 575 aa17.33■□□□□ 0.37
SNAP47-213ENST00000617596 DSTYKQ6XUX3 929 aa17.33■□□□□ 0.37
SNAP47-213ENST00000617596 DPH6Q7L8W6 267 aa17.33■□□□□ 0.37
SNAP47-213ENST00000617596 CCDC170Q8IYT3 715 aa17.33■□□□□ 0.37
SNAP47-213ENST00000617596 APPL2Q8NEU8 664 aa17.33■□□□□ 0.37
SNAP47-213ENST00000617596 OR6B3Q8NGW1 331 aa17.33■□□□□ 0.37
SNAP47-213ENST00000617596 TFAP2BQ92481 460 aa17.33■□□□□ 0.37
SNAP47-213ENST00000617596 DDX1Q92499 740 aaKnown RBP17.33■□□□□ 0.37
SNAP47-213ENST00000617596 DDX27Q96GQ7 796 aaKnown RBP17.33■□□□□ 0.37
SNAP47-213ENST00000617596 PCDHB18PQ96TA0 734 aa17.33■□□□□ 0.37
SNAP47-213ENST00000617596 ZSWIM1Q9BR11 485 aa17.33■□□□□ 0.37
SNAP47-213ENST00000617596 PPP2R2CQ9Y2T4 447 aa17.33■□□□□ 0.37
SNAP47-213ENST00000617596 PDGFRBP09619 1106 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms