RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 GATMP50440 423 aa21.88■■□□□ 1.09
SDHA-220ENST00000617470 AFF1P51825 1210 aaKnown RBP21.88■■□□□ 1.09
SDHA-220ENST00000617470 TFAMQ00059 246 aaKnown RBP21.88■■□□□ 1.09
SDHA-220ENST00000617470 SURF1Q15526 300 aa21.88■■□□□ 1.09
SDHA-220ENST00000617470 WDR44Q5JSH3 913 aa21.88■■□□□ 1.09
SDHA-220ENST00000617470 CLLU1OSQ5K130 101 aa21.88■■□□□ 1.09
SDHA-220ENST00000617470 UBE2OQ9C0C9 1292 aaKnown RBP21.88■■□□□ 1.09
SDHA-220ENST00000617470 THAP2Q9H0W7 228 aa21.88■■□□□ 1.09
SDHA-220ENST00000617470 ASB7Q9H672 318 aa21.88■■□□□ 1.09
SDHA-220ENST00000617470 PACSIN2Q9UNF0 486 aaPredicted RBP21.88■■□□□ 1.09
SDHA-220ENST00000617470 NUB1Q9Y5A7 615 aa21.88■■□□□ 1.09
SDHA-220ENST00000617470 SLC4A7Q9Y6M7 1214 aa21.88■■□□□ 1.09
SDHA-220ENST00000617470 TTC3P53804 2025 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 POMCP01189 267 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 TCP1P17987 556 aaKnown RBP21.87■■□□□ 1.09
SDHA-220ENST00000617470 ABCB4P21439 1286 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 SCNN1GP51170 649 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 POU5F1Q01860 360 aaKnown RBP21.87■■□□□ 1.09
SDHA-220ENST00000617470 NCOA4Q13772 614 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 C9orf50Q5SZB4 431 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 ALKAL1Q6UXT8 129 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 SLFN11Q7Z7L1 901 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 CD302Q8IX05 232 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 TOP1MTQ969P6 601 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 MTMR12Q9C0I1 747 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 OSGEPQ9NPF4 335 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 CNTN3Q9P232 1028 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 SMIM28A0A1B0GU29 152 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 ANKRD62A6NC57 917 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 FTLP02792 175 aaPredicted RBP21.87■■□□□ 1.09
SDHA-220ENST00000617470 NFICP08651 508 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 CDR2Q01850 454 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 TMEM132DQ14C87 1099 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 EFCAB13Q8IY85 973 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 SLC35G2Q8TBE7 412 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 FAM81BQ96LP2 452 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 ZMAT2Q96NC0 199 aaKnown RBP21.87■■□□□ 1.09
SDHA-220ENST00000617470 PARD6BQ9BYG5 372 aa21.87■■□□□ 1.09
SDHA-220ENST00000617470 CITO14578 2027 aa21.86■■□□□ 1.09
SDHA-220ENST00000617470 HOXA2O43364 376 aa21.86■■□□□ 1.09
SDHA-220ENST00000617470 KRT5P13647 590 aa21.86■■□□□ 1.09
SDHA-220ENST00000617470 AP3M2P53677 418 aa21.86■■□□□ 1.09
SDHA-220ENST00000617470 CUL2Q13617 745 aa21.86■■□□□ 1.09
SDHA-220ENST00000617470 ZNF572Q7Z3I7 529 aaPredicted RBP21.86■■□□□ 1.09
SDHA-220ENST00000617470 CRIPAKQ8N1N5 446 aa21.86■■□□□ 1.09
SDHA-220ENST00000617470 URGCPQ8TCY9 931 aa21.86■■□□□ 1.09
SDHA-220ENST00000617470 RFFLQ8WZ73 363 aa21.86■■□□□ 1.09
SDHA-220ENST00000617470 MIOSQ9NXC5 875 aa21.86■■□□□ 1.09
SDHA-220ENST00000617470 TBKBP1A7MCY6 615 aa21.85■■□□□ 1.09
SDHA-220ENST00000617470 PTGESO14684 152 aa21.85■■□□□ 1.09
SDHA-220ENST00000617470 TMEM191BP0C7N4 346 aa21.85■■□□□ 1.09
SDHA-220ENST00000617470 NOP14P78316 857 aaKnown RBP21.85■■□□□ 1.09
SDHA-220ENST00000617470 MLLT1Q03111 559 aaPredicted RBP21.85■■□□□ 1.09
SDHA-220ENST00000617470 CKAP4Q07065 602 aaKnown RBP21.85■■□□□ 1.09
SDHA-220ENST00000617470 IFI16Q16666 785 aaKnown RBP21.85■■□□□ 1.09
SDHA-220ENST00000617470 PAN2Q504Q3 1202 aaKnown RBP21.85■■□□□ 1.09
SDHA-220ENST00000617470 NOMO2Q5JPE7 1267 aa21.85■■□□□ 1.09
SDHA-220ENST00000617470 CTNNBL1Q8WYA6 563 aaPredicted RBP21.85■■□□□ 1.09
SDHA-220ENST00000617470 RNPC3Q96LT9 517 aaKnown RBP21.85■■□□□ 1.09
SDHA-220ENST00000617470 ZBED2Q9BTP6 218 aa21.85■■□□□ 1.09
SDHA-220ENST00000617470 SMARCAL1Q9NZC9 954 aa21.85■■□□□ 1.09
SDHA-220ENST00000617470 EHD2Q9NZN4 543 aa21.85■■□□□ 1.09
SDHA-220ENST00000617470 COG5Q9UP83 839 aa21.85■■□□□ 1.09
SDHA-220ENST00000617470 ASS1P00966 412 aaKnown RBP21.85■■□□□ 1.09
SDHA-220ENST00000617470 THP07101 528 aa21.85■■□□□ 1.09
SDHA-220ENST00000617470 GZMAP12544 262 aa21.85■■□□□ 1.09
SDHA-220ENST00000617470 PDE6CP51160 858 aa21.85■■□□□ 1.09
SDHA-220ENST00000617470 CLCN6P51797 869 aa21.85■■□□□ 1.09
SDHA-220ENST00000617470 RNASELQ05823 741 aaKnown RBP21.85■■□□□ 1.09
SDHA-220ENST00000617470 SHHQ15465 462 aa21.85■■□□□ 1.09
SDHA-220ENST00000617470 MTERF4Q7Z6M4 381 aaKnown RBP21.85■■□□□ 1.09
SDHA-220ENST00000617470 MSANTD4Q8NCY6 345 aa21.85■■□□□ 1.09
SDHA-220ENST00000617470 GSTCDQ8NEC7 633 aa21.85■■□□□ 1.09
SDHA-220ENST00000617470 ANKRD36BP1Q96IX9 119 aa21.85■■□□□ 1.09
SDHA-220ENST00000617470 STXBP5LQ9Y2K9 1186 aa21.85■■□□□ 1.09
SDHA-220ENST00000617470 PHACTR2O75167 634 aa21.84■■□□□ 1.09
SDHA-220ENST00000617470 RTN2O75298 545 aa21.84■■□□□ 1.09
SDHA-220ENST00000617470 KCNE1P15382 129 aa21.84■■□□□ 1.09
SDHA-220ENST00000617470 TUBB4BP68371 445 aa21.84■■□□□ 1.09
SDHA-220ENST00000617470 DUOXA2Q1HG44 320 aa21.84■■□□□ 1.09
SDHA-220ENST00000617470 XKR4Q5GH76 650 aa21.84■■□□□ 1.09
SDHA-220ENST00000617470 C18orf25Q96B23 403 aaPredicted RBP21.84■■□□□ 1.09
SDHA-220ENST00000617470 PNKPQ96T60 521 aa21.84■■□□□ 1.09
SDHA-220ENST00000617470 GDF15Q99988 308 aa21.84■■□□□ 1.09
SDHA-220ENST00000617470 ZNF446Q9NWS9 450 aa21.84■■□□□ 1.09
SDHA-220ENST00000617470 CNTN6Q9UQ52 1028 aa21.84■■□□□ 1.09
SDHA-220ENST00000617470 DGKIO75912 1065 aa21.83■■□□□ 1.09
SDHA-220ENST00000617470 TNNC2P02585 160 aa21.83■■□□□ 1.09
SDHA-220ENST00000617470 ATP2A2P16615 1042 aaKnown RBP21.83■■□□□ 1.09
SDHA-220ENST00000617470 GUCY2FP51841 1108 aa21.83■■□□□ 1.09
SDHA-220ENST00000617470 MYL6P60660 151 aa21.83■■□□□ 1.09
SDHA-220ENST00000617470 TMEM130Q8N3G9 435 aa21.83■■□□□ 1.09
SDHA-220ENST00000617470 UBR7Q8N806 425 aa21.83■■□□□ 1.09
SDHA-220ENST00000617470 MS4A14Q96JA4 679 aa21.83■■□□□ 1.09
SDHA-220ENST00000617470 CASD1Q96PB1 797 aa21.83■■□□□ 1.09
SDHA-220ENST00000617470 YME1L1Q96TA2 773 aa21.83■■□□□ 1.09
SDHA-220ENST00000617470 ABCB6Q9NP58 842 aa21.83■■□□□ 1.09
SDHA-220ENST00000617470 C2CD2Q9Y426 696 aa21.83■■□□□ 1.09
SDHA-220ENST00000617470 TNRC18O15417 2968 aaPredicted RBP21.83■■□□□ 1.09
SDHA-220ENST00000617470 BUB1BO60566 1050 aaPredicted RBP21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms