RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 YTHDF3Q7Z739 585 aaKnown RBP11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 ASAP3Q8TDY4 903 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 PPP2R3CQ969Q6 453 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 CATSPER2Q96P56 530 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 EFCAB1Q9HAE3 211 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 RNF146Q9NTX7 359 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 MTMR4Q9NYA4 1195 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 SRP68Q9UHB9 627 aaKnown RBP11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 MAP3K4Q9Y6R4 1608 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 SHROOM2Q13796 1616 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 TRPC5OSA6NMA1 111 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 DGAT1O75907 488 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 HMOX2P30519 316 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 SNRPFP62306 86 aaKnown RBP11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 SLC34A1Q06495 639 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 KRT72Q14CN4 511 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 RASA2Q15283 850 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 RRM2BQ7LG56 351 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 ARHGEF1Q92888 912 aaKnown RBP11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 DCPSQ96C86 337 aaKnown RBP11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 SIKE1Q9BRV8 207 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 PACSIN1Q9BY11 444 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 SIK2Q9H0K1 926 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 SP110Q9HB58 689 aa11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 EPB41L4AQ9HCS5 686 aaPredicted RBP11.13□□□□□ -0.63
CLTCL1-209ENST00000617103 ZBTB39O15060 712 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 PON1P27169 355 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 TPI1P60174 286 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 ACAD10Q6JQN1 1059 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 LAYNQ6UX15 382 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 EP400NLQ6ZTU2 488 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 P3H2Q8IVL5 708 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 MFN1Q8IWA4 741 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 THEM5Q8N1Q8 247 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 B4GALNT2Q8NHY0 566 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 ARHGEF38Q9NXL2 777 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 SLC24A2Q9UI40 661 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 ADGRA3Q8IWK6 1321 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 BNIP3LO60238 219 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 RAD17O75943 681 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 APOA4P06727 396 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 MAP3K7CLP57077 242 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 SGSM1Q2NKQ1 1148 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 EFHC1Q5JVL4 640 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 IYDQ6PHW0 289 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 STX19Q8N4C7 294 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 TERB1Q8NA31 727 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 ZKSCAN4Q969J2 545 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 SEMA4AQ9H3S1 761 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 KBTBD4Q9NVX7 518 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 CHORDC1Q9UHD1 332 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 SUGT1Q9Y2Z0 365 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 A0A0G2JLW4 131 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 PSTPIP1O43586 416 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 GLRA3O75311 464 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 ACOT2P49753 483 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 ZNF844Q08AG5 666 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 TBX2Q13207 712 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 PDAP1Q13442 181 aaKnown RBP11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 OASLQ15646 514 aaKnown RBP11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 TJAP1Q5JTD0 557 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 IRGCQ6NXR0 463 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 FAM71DQ8N9W8 422 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 ATP8B4Q8TF62 1192 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 ATG4AQ8WYN0 398 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 GPBP1L1Q9HC44 474 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 EXOSC4Q9NPD3 245 aaKnown RBP11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 FAM153AQ9UHL3 310 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 NBPF26B4DH59 902 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 USP1O94782 785 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 PSMA4P25789 261 aaKnown RBP11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 PTENP60484 403 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 NKX1-1Q15270 411 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 PREPLQ4J6C6 727 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 KIAA1841Q6NSI8 718 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 BNC2Q6ZN30 1099 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 NBPF15Q8N660 670 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 C1orf131Q8NDD1 294 aaKnown RBP11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 ELMO2Q96JJ3 720 aa11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-209ENST00000617103 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 TRAPPC3O43617 180 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 TPST1O60507 370 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 HLA-DRAP01903 254 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 CENPPQ6IPU0 288 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 HORMAD1Q86X24 394 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 CCDC103Q8IW40 242 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 WNK4Q96J92 1243 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 NR1H4Q96RI1 486 aaPredicted RBP11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 TRIM62Q9BVG3 475 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 TMEM120AQ9BXJ8 343 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 KLHL25Q9H0H3 589 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 TRIM45Q9H8W5 580 aaPredicted RBP11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 SYBUQ9NX95 663 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 ABCC3O15438 1527 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 POLR1AO95602 1720 aaPredicted RBP11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 TLR2O60603 784 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 AQP5P55064 265 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 KCNK10P57789 538 aa11.11□□□□□ -0.63
CLTCL1-209ENST00000617103 KRR1Q13601 381 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms