RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 MICALCLQ6ZW33 695 aa6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 TCEAL8Q8IYN2 117 aa6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 SLC44A3Q8N4M1 653 aa6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 SNX19Q92543 992 aa6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 LRIG1Q96JA1 1093 aa6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 ACO2Q99798 780 aaKnown RBP6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 AIFM2Q9BRQ8 373 aa6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 SARS2Q9NP81 518 aaKnown RBP6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 TCEAL9Q9UHQ7 104 aa6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 SPATA31A3Q5VYP0 1347 aa6.41□□□□□ -1.38
SCAMP1-205ENST00000614488 A0A088AWK7 358 aa6.4□□□□□ -1.38
SCAMP1-205ENST00000614488 PROM1O43490 865 aa6.4□□□□□ -1.38
SCAMP1-205ENST00000614488 UBXN7O94888 489 aa6.4□□□□□ -1.38
SCAMP1-205ENST00000614488 ADRA1BP35368 520 aa6.4□□□□□ -1.38
SCAMP1-205ENST00000614488 PHKA1P46020 1223 aa6.4□□□□□ -1.38
SCAMP1-205ENST00000614488 RAB1AP62820 205 aa6.4□□□□□ -1.38
SCAMP1-205ENST00000614488 NSUN7Q8NE18 718 aaKnown RBP6.4□□□□□ -1.38
SCAMP1-205ENST00000614488 PLBD2Q8NHP8 589 aa6.4□□□□□ -1.38
SCAMP1-205ENST00000614488 RUNDC1Q96C34 613 aa6.4□□□□□ -1.38
SCAMP1-205ENST00000614488 AGAP1Q9UPQ3 857 aa6.4□□□□□ -1.38
SCAMP1-205ENST00000614488 HTR1BP28222 390 aa6.39□□□□□ -1.39
SCAMP1-205ENST00000614488 SOX8P57073 446 aa6.39□□□□□ -1.39
SCAMP1-205ENST00000614488 EXOSC9Q06265 439 aaKnown RBP6.39□□□□□ -1.39
SCAMP1-205ENST00000614488 FGL2Q14314 439 aa6.39□□□□□ -1.39
SCAMP1-205ENST00000614488 LRRC41Q15345 812 aa6.39□□□□□ -1.39
SCAMP1-205ENST00000614488 SF3B3Q15393 1217 aaKnown RBP6.39□□□□□ -1.39
SCAMP1-205ENST00000614488 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
SCAMP1-205ENST00000614488 CD300EQ496F6 205 aaPredicted RBP6.39□□□□□ -1.39
SCAMP1-205ENST00000614488 VWA1Q6PCB0 445 aa6.39□□□□□ -1.39
SCAMP1-205ENST00000614488 USP37Q86T82 979 aa6.39□□□□□ -1.39
SCAMP1-205ENST00000614488 MAGEB6Q8N7X4 407 aa6.39□□□□□ -1.39
SCAMP1-205ENST00000614488 LRFN3Q9BTN0 628 aa6.39□□□□□ -1.39
SCAMP1-205ENST00000614488 RSAD1Q9HA92 442 aa6.39□□□□□ -1.39
SCAMP1-205ENST00000614488 CNNM1Q9NRU3 951 aa6.39□□□□□ -1.39
SCAMP1-205ENST00000614488 ERC2O15083 957 aa6.38□□□□□ -1.39
SCAMP1-205ENST00000614488 SUV39H1O43463 412 aa6.38□□□□□ -1.39
SCAMP1-205ENST00000614488 KIF20AO95235 890 aa6.38□□□□□ -1.39
SCAMP1-205ENST00000614488 GATA3P23771 443 aa6.38□□□□□ -1.39
SCAMP1-205ENST00000614488 NPTX2P47972 431 aa6.38□□□□□ -1.39
SCAMP1-205ENST00000614488 SMN1Q16637 294 aaKnown RBP6.38□□□□□ -1.39
SCAMP1-205ENST00000614488 ERCC6LQ2NKX8 1250 aa6.38□□□□□ -1.39
SCAMP1-205ENST00000614488 MINDY4Q4G0A6 757 aa6.38□□□□□ -1.39
SCAMP1-205ENST00000614488 FAM160B1Q5W0V3 765 aa6.38□□□□□ -1.39
SCAMP1-205ENST00000614488 TAF2Q6P1X5 1199 aa6.38□□□□□ -1.39
SCAMP1-205ENST00000614488 DAAM2Q86T65 1068 aa6.38□□□□□ -1.39
SCAMP1-205ENST00000614488 ZBTB34Q8NCN2 500 aa6.38□□□□□ -1.39
SCAMP1-205ENST00000614488 PSD4Q8NDX1 1056 aa6.38□□□□□ -1.39
SCAMP1-205ENST00000614488 GPR150Q8NGU9 434 aa6.38□□□□□ -1.39
SCAMP1-205ENST00000614488 PPP1R35Q8TAP8 253 aa6.38□□□□□ -1.39
SCAMP1-205ENST00000614488 OSBPL9Q96SU4 736 aa6.38□□□□□ -1.39
SCAMP1-205ENST00000614488 NOB1Q9ULX3 412 aaKnown RBP6.38□□□□□ -1.39
SCAMP1-205ENST00000614488 A0A0B4J269 797 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 M0QYG6 137 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 PRPF3O43395 683 aaKnown RBP6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 TSPAN6O43657 245 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 PEX1O43933 1283 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 TUSC2O75896 110 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 PIM1P11309 404 aaPredicted RBP6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 HDCP19113 662 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 FOLR3P41439 243 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 NDUFV1P49821 464 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 AGFG1P52594 562 aaKnown RBP6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 MRPS35P82673 323 aaKnown RBP6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 TUBB3Q13509 450 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 NBPF8Q3BBV2 869 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 ANO6Q4KMQ2 910 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 KHDC1LQ5JSQ8 128 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 KIAA0895LQ68EN5 471 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 OLFML1Q6UWY5 402 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 FAM9AQ8IZU1 332 aaPredicted RBP6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 HEPHQ9BQS7 1158 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 ARMT1Q9H993 441 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 MRPS18AQ9NVS2 196 aaKnown RBP6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 LRIT1Q9P2V4 623 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 C11orf21Q9P2W6 132 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 PCDHA6Q9UN73 950 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 MED16Q9Y2X0 877 aa6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.37□□□□□ -1.39
SCAMP1-205ENST00000614488 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 YY2O15391 372 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 MPPED1O15442 326 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 CTNND1O60716 968 aaKnown RBP6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 DNAJB5O75953 348 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 CXCR5P32302 372 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 TOB1P50616 345 aaPredicted RBP6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 GPSM2P81274 684 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 ZNF169Q14929 603 aaPredicted RBP6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 PRR16Q569H4 304 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 SLC30A10Q6XR72 485 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 OVCH2Q7RTZ1 564 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 FAM46DQ8NEK8 389 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 SLC30A5Q8TAD4 765 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 ACTRT2Q8TDY3 377 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 LPIN2Q92539 896 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 PGBD1Q96JS3 809 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 MRGPRX1Q96LB2 322 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 TMEM60Q9H2L4 133 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 SYNPO2LQ9H987 977 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 C1orf112Q9NSG2 853 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 PIH1D1Q9NWS0 290 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 728.4 ms