RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 ARL8AQ96BM9 186 aa9.15□□□□□ -0.95
TTC28-208ENST00000612946 GPCPD1Q9NPB8 672 aa9.15□□□□□ -0.95
TTC28-208ENST00000612946 CD3EAPO15446 510 aaKnown RBP9.15□□□□□ -0.95
TTC28-208ENST00000612946 ALDH5A1P51649 535 aaPredicted RBP9.15□□□□□ -0.95
TTC28-208ENST00000612946 OTUD4Q01804 1114 aaKnown RBP9.15□□□□□ -0.95
TTC28-208ENST00000612946 AAGABQ6PD74 315 aa9.15□□□□□ -0.95
TTC28-208ENST00000612946 SKA2Q8WVK7 121 aaPredicted RBP9.15□□□□□ -0.95
TTC28-208ENST00000612946 CCNB1IP1Q9NPC3 277 aa9.15□□□□□ -0.95
TTC28-208ENST00000612946 VPS45Q9NRW7 570 aa9.15□□□□□ -0.95
TTC28-208ENST00000612946 KCNK4Q9NYG8 393 aa9.15□□□□□ -0.95
TTC28-208ENST00000612946 RGS5O15539 181 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 LDHAP00338 332 aaKnown RBP9.14□□□□□ -0.95
TTC28-208ENST00000612946 FAM160B1Q5W0V3 765 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 HEATR6Q6AI08 1181 aaKnown RBP9.14□□□□□ -0.95
TTC28-208ENST00000612946 CAPSLQ8WWF8 208 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 NSFL1CQ9UNZ2 370 aaKnown RBP9.14□□□□□ -0.95
TTC28-208ENST00000612946 RAD51CO43502 376 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 PDE8AO60658 829 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 PDGFRBP09619 1106 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 MTFR1Q15390 333 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 KLHL17Q6TDP4 642 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 NOA1Q8NC60 698 aaKnown RBP9.14□□□□□ -0.95
TTC28-208ENST00000612946 OR7A2PQ8NGA2 310 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 VPS11Q9H270 941 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 PCDHGB4Q9UN71 923 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 STON1Q9Y6Q2 735 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 SLC15A2Q16348 729 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 TNFAIP8L3Q5GJ75 292 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 SAMD4BQ5PRF9 694 aaKnown RBP9.14□□□□□ -0.95
TTC28-208ENST00000612946 ERGIC2Q96RQ1 377 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 PACSIN1Q9BY11 444 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 C1orf232A0A0U1RR37 186 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 APOL1O14791 398 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 STX11O75558 287 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 CCNA2P20248 432 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 AP1S2P56377 157 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 ATP13A5Q4VNC0 1218 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.14□□□□□ -0.95
TTC28-208ENST00000612946 MAD2L2Q9UI95 211 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 MAP3K19Q56UN5 1328 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 CHD2O14647 1828 aaKnown RBP9.14□□□□□ -0.95
TTC28-208ENST00000612946 GP5P40197 560 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 TRAF3Q13114 568 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 NECTIN1Q15223 517 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 RASA2Q15283 850 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 TIPINQ9BVW5 301 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 JMJD4Q9H9V9 463 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 SPATA2Q9UM82 520 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 M0QX08 132 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 KYAT1Q16773 422 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 VPS37AQ8NEZ2 397 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 KATNAL1Q9BW62 490 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 TUFT1Q9NNX1 390 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 WDR35Q9P2L0 1181 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 RAPGEFL1Q9UHV5 662 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 BAIAP2Q9UQB8 552 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 PLA2G4BP0C869 781 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 ENO3P13929 434 aaPredicted RBP9.14□□□□□ -0.95
TTC28-208ENST00000612946 IL13P35225 146 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 NUDT2P50583 147 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 DDR2Q16832 855 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 PACS1Q6VY07 963 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 ARHGEF26Q96DR7 871 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 AIM2O14862 343 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 UNC5CO95185 931 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 IFNA14P01570 189 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 ADD1P35611 737 aaKnown RBP9.14□□□□□ -0.95
TTC28-208ENST00000612946 NCKAP1LP55160 1127 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 MCL1Q07820 350 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 PTPROQ16827 1216 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 C15orf59Q2T9L4 293 aaPredicted RBP9.14□□□□□ -0.95
TTC28-208ENST00000612946 XKRXQ6PP77 449 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 PPIL6Q8IXY8 311 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 SIX5Q8N196 739 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 VAV3Q9UKW4 847 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 ZBTB21Q9ULJ3 1066 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 TCF3P15923 654 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 ITKQ08881 620 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 ANGPTL8Q6UXH0 198 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 TTC30AQ86WT1 665 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 ERICH1Q86X53 443 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 SETDB2Q96T68 719 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 PAK5Q9P286 719 aa9.14□□□□□ -0.95
TTC28-208ENST00000612946 H3BQF6 201 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 SHOX2O60902 331 aaPredicted RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 FASP25445 335 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 GMFBP60983 142 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 KCNH2Q12809 1159 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 PMF1Q6P1K2 205 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 UNC45BQ8IWX7 931 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 TRIM54Q9BYV2 358 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 TRIM17Q9Y577 477 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 MBD5Q9P267 1494 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 ARMCX2Q7L311 632 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 ZNF677Q86XU0 584 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 C6orf62Q9GZU0 229 aaPredicted RBP9.13□□□□□ -0.95
TTC28-208ENST00000612946 PLEKHA5Q9HAU0 1116 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 DSEQ9UL01 958 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 RAB26Q9ULW5 256 aa9.13□□□□□ -0.95
TTC28-208ENST00000612946 DENND4BO75064 1496 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms