RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 OVOS1Q6IE37 1185 aa25.47■■□□□ 1.67
MMP28-203ENST00000612672 DSTYKQ6XUX3 929 aa25.47■■□□□ 1.67
MMP28-203ENST00000612672 CEP68Q76N32 757 aa25.47■■□□□ 1.67
MMP28-203ENST00000612672 PLIN2Q99541 437 aa25.47■■□□□ 1.67
MMP28-203ENST00000612672 ARRDC1-AS1Q9H2J1 176 aa25.47■■□□□ 1.67
MMP28-203ENST00000612672 PLEKHA5Q9HAU0 1116 aa25.47■■□□□ 1.67
MMP28-203ENST00000612672 UBQLN1Q9UMX0 589 aaKnown RBP25.47■■□□□ 1.67
MMP28-203ENST00000612672 OTOL1A6NHN0 477 aaPredicted RBP25.46■■□□□ 1.67
MMP28-203ENST00000612672 SEC24BO95487 1268 aa25.46■■□□□ 1.67
MMP28-203ENST00000612672 CLTAP09496 248 aa25.46■■□□□ 1.67
MMP28-203ENST00000612672 CYP3A5P20815 502 aa25.46■■□□□ 1.67
MMP28-203ENST00000612672 U2AF2P26368 475 aaKnown RBP eCLIP25.46■■□□□ 1.67
MMP28-203ENST00000612672 HOXA6P31267 233 aa25.46■■□□□ 1.67
MMP28-203ENST00000612672 ALDH1A3P47895 512 aa25.46■■□□□ 1.67
MMP28-203ENST00000612672 C1orf228Q6PIY5 440 aa25.46■■□□□ 1.67
MMP28-203ENST00000612672 USP37Q86T82 979 aa25.46■■□□□ 1.67
MMP28-203ENST00000612672 KBTBD6Q86V97 674 aa25.46■■□□□ 1.67
MMP28-203ENST00000612672 RIN3Q8TB24 985 aa25.46■■□□□ 1.67
MMP28-203ENST00000612672 RALYQ9UKM9 306 aaKnown RBP25.46■■□□□ 1.67
MMP28-203ENST00000612672 NOL7Q9UMY1 257 aaKnown RBP25.46■■□□□ 1.67
MMP28-203ENST00000612672 CACNA1GO43497 2377 aa25.45■■□□□ 1.66
MMP28-203ENST00000612672 TYMPP19971 482 aa25.45■■□□□ 1.66
MMP28-203ENST00000612672 PMLP29590 882 aa25.45■■□□□ 1.66
MMP28-203ENST00000612672 SLC12A3P55017 1021 aa25.45■■□□□ 1.66
MMP28-203ENST00000612672 MYBPC2Q14324 1141 aa25.45■■□□□ 1.66
MMP28-203ENST00000612672 ZRSR1Q15695 479 aaKnown RBP25.45■■□□□ 1.66
MMP28-203ENST00000612672 N4BP2L1Q5TBK1 243 aaPredicted RBP25.45■■□□□ 1.66
MMP28-203ENST00000612672 LRRC15Q8TF66 581 aa25.45■■□□□ 1.66
MMP28-203ENST00000612672 OBP2AQ9NY56 170 aa25.45■■□□□ 1.66
MMP28-203ENST00000612672 MATR3P43243 847 aaKnown RBP eCLIP25.44■■□□□ 1.66
MMP28-203ENST00000612672 NCKAP1LP55160 1127 aa25.44■■□□□ 1.66
MMP28-203ENST00000612672 LILRA4P59901 499 aa25.44■■□□□ 1.66
MMP28-203ENST00000612672 PPP2R3AQ06190 1150 aa25.44■■□□□ 1.66
MMP28-203ENST00000612672 GNL2Q13823 731 aaKnown RBP25.44■■□□□ 1.66
MMP28-203ENST00000612672 AASDHQ4L235 1098 aaPredicted RBP25.44■■□□□ 1.66
MMP28-203ENST00000612672 ARSHQ5FYA8 562 aa25.44■■□□□ 1.66
MMP28-203ENST00000612672 HYIQ5T013 277 aa25.44■■□□□ 1.66
MMP28-203ENST00000612672 NAIF1Q69YI7 327 aaPredicted RBP25.44■■□□□ 1.66
MMP28-203ENST00000612672 FSTL4Q6MZW2 842 aa25.44■■□□□ 1.66
MMP28-203ENST00000612672 BPIFB1Q8TDL5 484 aa25.44■■□□□ 1.66
MMP28-203ENST00000612672 CHAMP1Q96JM3 812 aa25.44■■□□□ 1.66
MMP28-203ENST00000612672 SENP8Q96LD8 212 aa25.44■■□□□ 1.66
MMP28-203ENST00000612672 LLPHQ9BRT6 129 aaKnown RBP25.44■■□□□ 1.66
MMP28-203ENST00000612672 TIPINQ9BVW5 301 aa25.44■■□□□ 1.66
MMP28-203ENST00000612672 OXCT2Q9BYC2 517 aaPredicted RBP25.44■■□□□ 1.66
MMP28-203ENST00000612672 HPS4Q9NQG7 708 aa25.44■■□□□ 1.66
MMP28-203ENST00000612672 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.44■■□□□ 1.66
MMP28-203ENST00000612672 LIMCH1Q9UPQ0 1083 aa25.44■■□□□ 1.66
MMP28-203ENST00000612672 ASB3Q9Y575 518 aa25.44■■□□□ 1.66
MMP28-203ENST00000612672 STK24Q9Y6E0 443 aa25.44■■□□□ 1.66
MMP28-203ENST00000612672 DPYSL4O14531 572 aa25.43■■□□□ 1.66
MMP28-203ENST00000612672 EPN2O95208 641 aa25.43■■□□□ 1.66
MMP28-203ENST00000612672 ADRB2P07550 413 aa25.43■■□□□ 1.66
MMP28-203ENST00000612672 RAP1GAPP47736 663 aa25.43■■□□□ 1.66
MMP28-203ENST00000612672 LIMK1P53667 647 aa25.43■■□□□ 1.66
MMP28-203ENST00000612672 SPATA1Q5VX52 437 aa25.43■■□□□ 1.66
MMP28-203ENST00000612672 TRIM68Q6AZZ1 485 aa25.43■■□□□ 1.66
MMP28-203ENST00000612672 JADE1Q6IE81 842 aa25.43■■□□□ 1.66
MMP28-203ENST00000612672 SLC39A4Q6P5W5 647 aa25.43■■□□□ 1.66
MMP28-203ENST00000612672 SYT2Q8N9I0 419 aaPredicted RBP25.43■■□□□ 1.66
MMP28-203ENST00000612672 FAM200AQ8TCP9 573 aa25.43■■□□□ 1.66
MMP28-203ENST00000612672 GAB3Q8WWW8 586 aa25.43■■□□□ 1.66
MMP28-203ENST00000612672 SLC46A2Q9BY10 475 aa25.43■■□□□ 1.66
MMP28-203ENST00000612672 RAB34Q9BZG1 259 aa25.43■■□□□ 1.66
MMP28-203ENST00000612672 TASP1Q9H6P5 420 aa25.43■■□□□ 1.66
MMP28-203ENST00000612672 CCL26Q9Y258 94 aa25.43■■□□□ 1.66
MMP28-203ENST00000612672 AKAP13Q12802 2813 aa25.43■■□□□ 1.66
MMP28-203ENST00000612672 NFICP08651 508 aa25.42■■□□□ 1.66
MMP28-203ENST00000612672 WEE1P30291 646 aa25.42■■□□□ 1.66
MMP28-203ENST00000612672 PRPHP41219 470 aa25.42■■□□□ 1.66
MMP28-203ENST00000612672 SLC39A12Q504Y0 691 aa25.42■■□□□ 1.66
MMP28-203ENST00000612672 TMEM150AQ86TG1 271 aa25.42■■□□□ 1.66
MMP28-203ENST00000612672 STKLD1Q8NE28 680 aa25.42■■□□□ 1.66
MMP28-203ENST00000612672 SEPT5Q99719 369 aaPredicted RBP25.42■■□□□ 1.66
MMP28-203ENST00000612672 IGF2RP11717 2491 aa25.41■■□□□ 1.66
MMP28-203ENST00000612672 ZNF806P0C7X5 589 aa25.41■■□□□ 1.66
MMP28-203ENST00000612672 MCM2P49736 904 aa25.41■■□□□ 1.66
MMP28-203ENST00000612672 ITPRIPL2Q3MIP1 535 aa25.41■■□□□ 1.66
MMP28-203ENST00000612672 C9orf57Q5W0N0 161 aa25.41■■□□□ 1.66
MMP28-203ENST00000612672 DTHD1Q6ZMT9 781 aa25.41■■□□□ 1.66
MMP28-203ENST00000612672 SYNPOQ8N3V7 929 aa25.41■■□□□ 1.66
MMP28-203ENST00000612672 GIPC2Q8TF65 315 aa25.41■■□□□ 1.66
MMP28-203ENST00000612672 BICD1Q96G01 975 aa25.41■■□□□ 1.66
MMP28-203ENST00000612672 FAM83CQ9BQN1 747 aa25.41■■□□□ 1.66
MMP28-203ENST00000612672 ZCWPW1Q9H0M4 648 aa25.41■■□□□ 1.66
MMP28-203ENST00000612672 FBRSL1Q9HCM7 1045 aaKnown RBP25.41■■□□□ 1.66
MMP28-203ENST00000612672 RPP40O75818 363 aaKnown RBP25.4■■□□□ 1.66
MMP28-203ENST00000612672 PLA2G4BP0C869 781 aa25.4■■□□□ 1.66
MMP28-203ENST00000612672 ODC1P11926 461 aa25.4■■□□□ 1.66
MMP28-203ENST00000612672 NMT1P30419 496 aaKnown RBP25.4■■□□□ 1.66
MMP28-203ENST00000612672 SMTNP53814 917 aa25.4■■□□□ 1.66
MMP28-203ENST00000612672 TMEM119Q4V9L6 283 aa25.4■■□□□ 1.66
MMP28-203ENST00000612672 ARHGAP15Q53QZ3 475 aa25.4■■□□□ 1.66
MMP28-203ENST00000612672 TMEM196Q5HYL7 178 aa25.4■■□□□ 1.66
MMP28-203ENST00000612672 PLA2G2CQ5R387 149 aa25.4■■□□□ 1.66
MMP28-203ENST00000612672 IL31Q6EBC2 164 aa25.4■■□□□ 1.66
MMP28-203ENST00000612672 TCEAL6Q6IPX3 200 aa25.4■■□□□ 1.66
MMP28-203ENST00000612672 HAUS6Q7Z4H7 955 aa25.4■■□□□ 1.66
MMP28-203ENST00000612672 LRRTM3Q86VH5 581 aa25.4■■□□□ 1.66
MMP28-203ENST00000612672 TCEAL3Q969E4 200 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms