RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 P3H1Q32P28 736 aa14.92□□□□□ -0.02
PCDHGA3-202ENST00000612467 IZUMO3Q5VZ72 239 aa14.92□□□□□ -0.02
PCDHGA3-202ENST00000612467 SULF1Q8IWU6 871 aa14.92□□□□□ -0.02
PCDHGA3-202ENST00000612467 DHX37Q8IY37 1157 aaKnown RBP14.92□□□□□ -0.02
PCDHGA3-202ENST00000612467 LRRC34Q8IZ02 419 aa14.92□□□□□ -0.02
PCDHGA3-202ENST00000612467 ANKRD42Q8N9B4 389 aa14.92□□□□□ -0.02
PCDHGA3-202ENST00000612467 PLVAPQ9BX97 442 aa14.92□□□□□ -0.02
PCDHGA3-202ENST00000612467 SDCBP2Q9H190 292 aa14.92□□□□□ -0.02
PCDHGA3-202ENST00000612467 ZWILCHQ9H900 591 aa14.92□□□□□ -0.02
PCDHGA3-202ENST00000612467 NINJ2Q9NZG7 142 aa14.92□□□□□ -0.02
PCDHGA3-202ENST00000612467 NEU2Q9Y3R4 380 aa14.92□□□□□ -0.02
PCDHGA3-202ENST00000612467 TMEM191CA6NGB0 347 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 A6NNZ2 444 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 OGTO15294 1046 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 KIAA0754O94854 1291 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 GH1P01241 217 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 TMEM191BP0C7N4 346 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 CDR1P51861 262 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 GAD2Q05329 585 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 MKRN3Q13064 507 aaKnown RBP14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 SLMAPQ14BN4 828 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 TUBB8Q3ZCM7 444 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 TTC31Q49AM3 519 aaPredicted RBP14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 RAB6CQ53S08 254 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 CELF3Q5SZQ8 465 aaKnown RBP14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 EFCAB12Q6NXP0 572 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 DNAJC24Q6P3W2 148 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 WDR49Q8IV35 697 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 ATL2Q8NHH9 583 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 TRIM11Q96F44 468 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 OSBPL7Q9BZF2 842 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 FAM129AQ9BZQ8 928 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 NIF3L1Q9GZT8 377 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 RAB6CQ9H0N0 254 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 XYLT2Q9H1B5 865 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 EFCC1Q9HA90 598 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 MRPL47Q9HD33 250 aaKnown RBP14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 PARVAQ9NVD7 372 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 WHRNQ9P202 907 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 CNTN6Q9UQ52 1028 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 GOLGA8MH3BSY2 632 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 GPR25O00155 361 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 MPP2Q14168 576 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 TAF5Q15542 800 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 DUOXA2Q1HG44 320 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 PTPN20Q4JDL3 420 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 ATF7IP2Q5U623 682 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 ZPBP2Q6X784 338 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 ZNF365Q70YC5 407 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 KIAA0319LQ8IZA0 1049 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 PPM1EQ8WY54 764 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 DCPSQ96C86 337 aaKnown RBP14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 SLITRK1Q96PX8 696 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 CXCL16Q9H2A7 254 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 SMYD3Q9H7B4 428 aa14.91□□□□□ -0.02
PCDHGA3-202ENST00000612467 LRRD1A4D1F6 860 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 GAS8O95995 478 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 TXNP10599 105 aaKnown RBP14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 RFC1P35251 1148 aaPredicted RBP14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 C1QBPQ07021 282 aaKnown RBP14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 WDR72Q3MJ13 1102 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 IER5Q5VY09 327 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 C6orf89Q6UWU4 347 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 TAX1BP1Q86VP1 789 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 KATNAL2Q8IYT4 538 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 GDAP1Q8TB36 358 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 FAM81BQ96LP2 452 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 TSPYL1Q9H0U9 437 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 INTS9Q9NV88 658 aaKnown RBP14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 A0A0G2JLL6 359 aaPredicted RBP14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 TCRBV5S1A1TA0A578 114 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 PSTPIP1O43586 416 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 CD48P09326 243 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 PAEPP09466 180 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 ITIH2P19823 946 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 C6orf118Q5T5N4 469 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 PRRT2Q7Z6L0 340 aaPredicted RBP14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 ZBTB8OSQ8IWT0 167 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 ARFGAP1Q8N6T3 406 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 SLCO2A1Q92959 643 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 ARHGEF2Q92974 986 aaKnown RBP14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 CABS1Q96KC9 395 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 TMEM121Q9BTD3 319 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 CDT1Q9H211 546 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 SIX4Q9UIU6 781 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 ZNF148Q9UQR1 794 aa14.9□□□□□ -0.02
PCDHGA3-202ENST00000612467 DNM1LO00429 736 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 IFNB1P01574 187 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 VTNP04004 478 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 POTEJP0CG39 1038 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 IL1R2P27930 398 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 MCL1Q07820 350 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 SPDYCQ5MJ68 293 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 SYCP2LQ5T4T6 812 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 CDCA2Q69YH5 1023 aaPredicted RBP14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 TRIM72Q6ZMU5 477 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 CHMP6Q96FZ7 201 aa14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 ZNF317Q96PQ6 595 aaPredicted RBP14.89□□□□□ -0.03
PCDHGA3-202ENST00000612467 TTC4O95801 387 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms