RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 MYCNP04198 464 aaPredicted RBP15.59■□□□□ 0.09
CDH1-213ENST00000612417 ZNF286BP0CG31 522 aa15.59■□□□□ 0.09
CDH1-213ENST00000612417 SRGAP2CP0DJJ0 459 aa15.59■□□□□ 0.09
CDH1-213ENST00000612417 PPARDQ03181 441 aa15.59■□□□□ 0.09
CDH1-213ENST00000612417 ANKRD20A8PQ5CZ79 823 aa15.59■□□□□ 0.09
CDH1-213ENST00000612417 IQSEC1Q6DN90 963 aa15.59■□□□□ 0.09
CDH1-213ENST00000612417 PPP1R2P3Q6NXS1 205 aa15.59■□□□□ 0.09
CDH1-213ENST00000612417 SMC1BQ8NDV3 1235 aa15.59■□□□□ 0.09
CDH1-213ENST00000612417 OR6J1Q8NGC5 347 aa15.59■□□□□ 0.09
CDH1-213ENST00000612417 CPA5Q8WXQ8 436 aa15.59■□□□□ 0.09
CDH1-213ENST00000612417 SERPINB12Q96P63 405 aa15.59■□□□□ 0.09
CDH1-213ENST00000612417 JPH2Q9BR39 696 aaPredicted RBP15.59■□□□□ 0.09
CDH1-213ENST00000612417 CHST7Q9NS84 486 aa15.59■□□□□ 0.09
CDH1-213ENST00000612417 INTS9Q9NV88 658 aaKnown RBP15.59■□□□□ 0.09
CDH1-213ENST00000612417 CNTN6Q9UQ52 1028 aa15.59■□□□□ 0.09
CDH1-213ENST00000612417 GAS2O43903 313 aaKnown RBP15.58■□□□□ 0.09
CDH1-213ENST00000612417 CALCAP01258 141 aa15.58■□□□□ 0.09
CDH1-213ENST00000612417 CYP2B6P20813 491 aa15.58■□□□□ 0.09
CDH1-213ENST00000612417 PIK3CAP42336 1068 aa15.58■□□□□ 0.09
CDH1-213ENST00000612417 LAMTOR4Q0VGL1 99 aa15.58■□□□□ 0.09
CDH1-213ENST00000612417 CAPSQ13938 189 aa15.58■□□□□ 0.09
CDH1-213ENST00000612417 DUSP28Q4G0W2 176 aa15.58■□□□□ 0.09
CDH1-213ENST00000612417 PIGWQ7Z7B1 504 aa15.58■□□□□ 0.09
CDH1-213ENST00000612417 CCT6BQ92526 530 aa15.58■□□□□ 0.09
CDH1-213ENST00000612417 EMID1Q96A84 441 aaPredicted RBP15.58■□□□□ 0.09
CDH1-213ENST00000612417 HERPUD2Q9BSE4 406 aa15.58■□□□□ 0.09
CDH1-213ENST00000612417 KDM4CQ9H3R0 1056 aa15.58■□□□□ 0.09
CDH1-213ENST00000612417 ASIC3Q9UHC3 531 aa15.58■□□□□ 0.09
CDH1-213ENST00000612417 AGO2Q9UKV8 859 aaKnown RBP15.58■□□□□ 0.09
CDH1-213ENST00000612417 NEU2Q9Y3R4 380 aa15.58■□□□□ 0.09
CDH1-213ENST00000612417 SMIM23A6NLE4 172 aa15.58■□□□□ 0.08
CDH1-213ENST00000612417 TCEA3O75764 348 aa15.58■□□□□ 0.08
CDH1-213ENST00000612417 VNN1O95497 513 aa15.58■□□□□ 0.08
CDH1-213ENST00000612417 GHRP10912 638 aa15.58■□□□□ 0.08
CDH1-213ENST00000612417 WNT7BP56706 349 aa15.58■□□□□ 0.08
CDH1-213ENST00000612417 NLRP11P59045 1033 aaKnown RBP15.58■□□□□ 0.08
CDH1-213ENST00000612417 TNFAIP2Q03169 654 aa15.58■□□□□ 0.08
CDH1-213ENST00000612417 CRHR2Q13324 411 aa15.58■□□□□ 0.08
CDH1-213ENST00000612417 CUL2Q13617 745 aa15.58■□□□□ 0.08
CDH1-213ENST00000612417 MXD4Q14582 209 aaPredicted RBP15.58■□□□□ 0.08
CDH1-213ENST00000612417 ITIH4Q14624 930 aa15.58■□□□□ 0.08
CDH1-213ENST00000612417 LIN9Q5TKA1 542 aa15.58■□□□□ 0.08
CDH1-213ENST00000612417 SLFN12LQ6IEE8 588 aa15.58■□□□□ 0.08
CDH1-213ENST00000612417 CRELD2Q6UXH1 353 aaPredicted RBP15.58■□□□□ 0.08
CDH1-213ENST00000612417 CCDC25Q86WR0 208 aa15.58■□□□□ 0.08
CDH1-213ENST00000612417 PHF13Q86YI8 300 aaPredicted RBP15.58■□□□□ 0.08
CDH1-213ENST00000612417 ATL2Q8NHH9 583 aa15.58■□□□□ 0.08
CDH1-213ENST00000612417 TRAIPQ9BWF2 469 aa15.58■□□□□ 0.08
CDH1-213ENST00000612417 MRPL47Q9HD33 250 aaKnown RBP15.58■□□□□ 0.08
CDH1-213ENST00000612417 GOLGA6L7A0A1B0GV03 622 aa15.57■□□□□ 0.08
CDH1-213ENST00000612417 TMEM88BA6NKF7 163 aa15.57■□□□□ 0.08
CDH1-213ENST00000612417 TNPO2O14787 897 aaKnown RBP15.57■□□□□ 0.08
CDH1-213ENST00000612417 ADCY3O60266 1144 aa15.57■□□□□ 0.08
CDH1-213ENST00000612417 RASSF9O75901 435 aa15.57■□□□□ 0.08
CDH1-213ENST00000612417 INSRRP14616 1297 aa15.57■□□□□ 0.08
CDH1-213ENST00000612417 TNNI1P19237 187 aa15.57■□□□□ 0.08
CDH1-213ENST00000612417 NOMO3P69849 1222 aa15.57■□□□□ 0.08
CDH1-213ENST00000612417 EFCAB12Q6NXP0 572 aa15.57■□□□□ 0.08
CDH1-213ENST00000612417 RHPN2Q8IUC4 686 aa15.57■□□□□ 0.08
CDH1-213ENST00000612417 RHOT1Q8IXI2 618 aa15.57■□□□□ 0.08
CDH1-213ENST00000612417 KATNAL2Q8IYT4 538 aa15.57■□□□□ 0.08
CDH1-213ENST00000612417 CCDC197Q8NCU1 140 aa15.57■□□□□ 0.08
CDH1-213ENST00000612417 ATG4AQ8WYN0 398 aa15.57■□□□□ 0.08
CDH1-213ENST00000612417 ZBTB10Q96DT7 871 aa15.57■□□□□ 0.08
CDH1-213ENST00000612417 ZIC5Q96T25 663 aa15.57■□□□□ 0.08
CDH1-213ENST00000612417 ZNF236Q9UL36 1845 aa15.57■□□□□ 0.08
CDH1-213ENST00000612417 PTPRJQ12913 1337 aa15.57■□□□□ 0.08
CDH1-213ENST00000612417 DNM1LO00429 736 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 TTC4O95801 387 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 LDHAP00338 332 aaKnown RBP15.56■□□□□ 0.08
CDH1-213ENST00000612417 TBXAS1P24557 533 aaPredicted RBP15.56■□□□□ 0.08
CDH1-213ENST00000612417 ATP5DP30049 168 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 SLCO1A2P46721 670 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 MKRN4PQ13434 485 aaPredicted RBP15.56■□□□□ 0.08
CDH1-213ENST00000612417 SNX1Q13596 522 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 CNGA2Q16280 664 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 CCNG2Q16589 344 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 ZNF484Q5JVG2 852 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 PLEKHA7Q6IQ23 1121 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 EXOC3L1Q86VI1 746 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 RELL1Q8IUW5 271 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 ANKS4BQ8N8V4 417 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 RNF149Q8NC42 400 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.56■□□□□ 0.08
CDH1-213ENST00000612417 UHMK1Q8TAS1 419 aaKnown RBP15.56■□□□□ 0.08
CDH1-213ENST00000612417 FAM84AQ96KN4 292 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 DDX23Q9BUQ8 820 aaKnown RBP15.56■□□□□ 0.08
CDH1-213ENST00000612417 HAPLN2Q9GZV7 340 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 FLRT1Q9NZU1 646 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 SCINQ9Y6U3 715 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 ATF2P15336 505 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 RGS2P41220 211 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 EFNA5P52803 228 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 ITGA8P53708 1063 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 C1QBPQ07021 282 aaKnown RBP15.56■□□□□ 0.08
CDH1-213ENST00000612417 MAMLD1Q13495 774 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 CCL14Q16627 93 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 SPRED3Q2MJR0 410 aa15.56■□□□□ 0.08
CDH1-213ENST00000612417 LMBRD2Q68DH5 695 aaPredicted RBP15.56■□□□□ 0.08
CDH1-213ENST00000612417 ZBTB8OSQ8IWT0 167 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms