RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 NETO2Q8NC67 525 aa3.99□□□□□ -1.77
RNF38-210ENST00000611646 LNX1Q8TBB1 728 aaPredicted RBP3.99□□□□□ -1.77
RNF38-210ENST00000611646 BAP1Q92560 729 aa3.99□□□□□ -1.77
RNF38-210ENST00000611646 SGSM3Q96HU1 749 aa3.99□□□□□ -1.77
RNF38-210ENST00000611646 APOL2Q9BQE5 337 aa3.99□□□□□ -1.77
RNF38-210ENST00000611646 FAM129AQ9BZQ8 928 aa3.99□□□□□ -1.77
RNF38-210ENST00000611646 EPS15L1Q9UBC2 864 aa3.99□□□□□ -1.77
RNF38-210ENST00000611646 NAALADL1Q9UQQ1 740 aa3.99□□□□□ -1.77
RNF38-210ENST00000611646 SUGT1Q9Y2Z0 365 aa3.99□□□□□ -1.77
RNF38-210ENST00000611646 MYO15AQ9UKN7 3530 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 FAM237AA0A1B0GTK4 181 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 MEI4A8MW99 385 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 TRIM49D1C9J1S8 452 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 PPP1R12AO14974 1030 aaPredicted RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 HUS1O60921 280 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 CBX6O95503 412 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 RARBP10826 455 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 ENO3P13929 434 aaPredicted RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 BGNP21810 368 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 PMLP29590 882 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 SSTR1P30872 391 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 GNL1P36915 607 aaPredicted RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 PBX1P40424 430 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 CLCN3P51790 818 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 ACTR2P61160 394 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 OTUD4Q01804 1114 aaKnown RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 PPP3CAQ08209 521 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 CUL2Q13617 745 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 RCN1Q15293 331 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 TMTC4Q5T4D3 741 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 RC3H1Q5TC82 1133 aaKnown RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 PCNX4Q63HM2 1172 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 RSBN1LQ6PCB5 846 aaPredicted RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 DENND5BQ6ZUT9 1274 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 NDUFAF2Q8N183 169 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 C4orf32Q8N8J7 132 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 RFWD2Q8NHY2 731 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 RUBCNQ92622 972 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 MMP19Q99542 508 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 CYP26B1Q9NR63 512 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 DDX56Q9NY93 547 aaKnown RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 ARMCX1Q9P291 453 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 CNOT7Q9UIV1 285 aaKnown RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 PNMA3Q9UL41 463 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 CDH23Q9H251 3354 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 WDFY3Q8IZQ1 3526 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 COL5A2P05997 1499 aaPredicted RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 NKRFO15226 690 aaKnown RBP eCLIP3.98□□□□□ -1.77
RNF38-210ENST00000611646 EXTL3O43909 919 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 ATP6V1G2O95670 118 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 HMBSP08397 361 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 KCNA3P22001 575 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 TCF7P36402 384 aaPredicted RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 MYL6P60660 151 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 AP2B1P63010 937 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 NR1H3Q13133 447 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 DRP2Q13474 957 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 XKR3Q5GH77 459 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 OTOP1Q7RTM1 612 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 COL23A1Q86Y22 540 aaPredicted RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 ST13P4Q8IZP2 240 aaPredicted RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 ICA1LQ8NDH6 482 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 OR6P1Q8NGX9 317 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 GABPB2Q8TAK5 448 aaPredicted RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 RBM46Q8TBY0 533 aaKnown RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 TRAPPC12Q8WVT3 735 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 DNAJC19Q96DA6 116 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 XAB2Q9HCS7 855 aaKnown RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 KCND1Q9NSA2 647 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 AIPL1Q9NZN9 384 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 HACD3Q9P035 362 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 BCAP29Q9UHQ4 241 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 GTF3C4Q9UKN8 822 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 AURKCQ9UQB9 309 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 PIN4Q9Y237 131 aaKnown RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 BCL9O00512 1426 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 MST1RQ04912 1400 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 PEAK1Q9H792 1746 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 PPP1R11O60927 126 aaPredicted RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 TTC4O95801 387 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 VTNP04004 478 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 CHKAP35790 457 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 GLRBP48167 497 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 CDH8P55286 799 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 GEMIN4P57678 1058 aaKnown RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 PTENP60484 403 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 PRAMEP78395 509 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 SEMA3FQ13275 785 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 STX3Q13277 289 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 BIRC2Q13490 618 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 HIC1Q14526 733 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 PKN2Q16513 984 aaKnown RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 GOLGA7BQ2TAP0 167 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 DCAF6Q58WW2 860 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 DPY19L2Q6NUT2 758 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 EFCAB12Q6NXP0 572 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 ZCCHC23Q6ZST2 131 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 ENOSF1Q7L5Y1 443 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 NLRP9Q7RTR0 991 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 DDIASQ8IXT1 998 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms