RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 NKRFO15226 690 aaKnown RBP eCLIP7.65□□□□□ -1.18
CSDE1-218ENST00000610726 PGK1P00558 417 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 ADRB2P07550 413 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 FAM200BP0CF97 657 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 AKR1A1P14550 325 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 PNPLA4P41247 253 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 PTPN11Q06124 597 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-218ENST00000610726 RCN2Q14257 317 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 MFSD10Q14728 455 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 HIF1AQ16665 826 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 IRF2BP1Q8IU81 584 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 CDKL3Q8IVW4 592 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-218ENST00000610726 MTMR14Q8NCE2 650 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 PPFIBP2Q8ND30 876 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 USP33Q8TEY7 942 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 NUDCD1Q96RS6 583 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 ELAC2Q9BQ52 826 aaKnown RBP7.65□□□□□ -1.18
CSDE1-218ENST00000610726 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.65□□□□□ -1.18
CSDE1-218ENST00000610726 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.65□□□□□ -1.18
CSDE1-218ENST00000610726 G3BP2Q9UN86 482 aaKnown RBP7.65□□□□□ -1.18
CSDE1-218ENST00000610726 HES2Q9Y543 173 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 SPDYE5A6NIY4 337 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 TGFB1I1O43294 461 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 GPC4O75487 556 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 POMCP01189 267 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 GTF2BQ00403 316 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 KCNMA1Q12791 1236 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 TERF2Q15554 542 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 FSCN1Q16658 493 aaKnown RBP7.65□□□□□ -1.18
CSDE1-218ENST00000610726 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-218ENST00000610726 GPR142Q7Z601 462 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 BRSK2Q8IWQ3 736 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 EFCAB13Q8IY85 973 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 HDAC11Q96DB2 347 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 ZNF512Q96ME7 567 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-218ENST00000610726 ERP44Q9BS26 406 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 WDR70Q9NW82 654 aa7.65□□□□□ -1.18
CSDE1-218ENST00000610726 MYPNQ86TC9 1320 aa7.65□□□□□ -1.19
CSDE1-218ENST00000610726 LACTBL1A8MY62 500 aa7.65□□□□□ -1.19
CSDE1-218ENST00000610726 CTIFO43310 598 aaKnown RBP7.65□□□□□ -1.19
CSDE1-218ENST00000610726 GMNNO75496 209 aa7.65□□□□□ -1.19
CSDE1-218ENST00000610726 AP1G2O75843 785 aa7.65□□□□□ -1.19
CSDE1-218ENST00000610726 THP07101 528 aa7.65□□□□□ -1.19
CSDE1-218ENST00000610726 VDRP11473 427 aa7.65□□□□□ -1.19
CSDE1-218ENST00000610726 RASSF2P50749 326 aa7.65□□□□□ -1.19
CSDE1-218ENST00000610726 ZNF280AP59817 542 aaPredicted RBP7.65□□□□□ -1.19
CSDE1-218ENST00000610726 COG7P83436 770 aa7.65□□□□□ -1.19
CSDE1-218ENST00000610726 VEPH1Q14D04 833 aa7.65□□□□□ -1.19
CSDE1-218ENST00000610726 KYNUQ16719 465 aa7.65□□□□□ -1.19
CSDE1-218ENST00000610726 IQSEC1Q6DN90 963 aa7.65□□□□□ -1.19
CSDE1-218ENST00000610726 KIAA0319LQ8IZA0 1049 aa7.65□□□□□ -1.19
CSDE1-218ENST00000610726 CCDC33Q8N5R6 958 aa7.65□□□□□ -1.19
CSDE1-218ENST00000610726 PCSK9Q8NBP7 692 aaKnown RBP7.65□□□□□ -1.19
CSDE1-218ENST00000610726 VPS11Q9H270 941 aa7.65□□□□□ -1.19
CSDE1-218ENST00000610726 XPNPEP3Q9NQH7 507 aa7.65□□□□□ -1.19
CSDE1-218ENST00000610726 STARD7Q9NQZ5 370 aa7.65□□□□□ -1.19
CSDE1-218ENST00000610726 TCHHQ07283 1943 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 COPEO14579 308 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 ZBTB24O43167 697 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-218ENST00000610726 KRT38O76015 456 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 ZFXP17010 805 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-218ENST00000610726 ACAT1P24752 427 aaKnown RBP7.64□□□□□ -1.19
CSDE1-218ENST00000610726 NUMBP49757 651 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 FBXO47Q5MNV8 452 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 CD302Q8IX05 232 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 ATXN7L3BQ96GX2 97 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 TMEM106CQ9BVX2 250 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 TRAIPQ9BWF2 469 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 KCTD10Q9H3F6 313 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 SP110Q9HB58 689 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 UBN1Q9NPG3 1134 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 BTBD7Q9P203 1132 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 TJP2Q9UDY2 1190 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 ZNF142P52746 1687 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-218ENST00000610726 LRRC37A3O60309 1634 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 RNF225M0QZC1 329 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-218ENST00000610726 PSEN2P49810 448 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 ASPHQ12797 758 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 CAPSQ13938 189 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 PAPD7Q5XG87 772 aaKnown RBP7.64□□□□□ -1.19
CSDE1-218ENST00000610726 PHLDB3Q6NSJ2 640 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 EPM2AIP1Q7L775 607 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-218ENST00000610726 NOP9Q86U38 636 aaKnown RBP7.64□□□□□ -1.19
CSDE1-218ENST00000610726 ABRAQ8N0Z2 381 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 ARHGAP24Q8N264 748 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 MMGT1Q8N4V1 131 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 ATP11CQ8NB49 1132 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 LRRN4CLQ8ND94 238 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 OR6P1Q8NGX9 317 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 PPM1EQ8WY54 764 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 EXT2Q93063 718 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 TMEM176AQ96HP8 235 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 TTC25Q96NG3 672 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 SLC13A1Q9BZW2 595 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 GPATCH2LQ9NWQ4 482 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 DDIT4Q9NX09 232 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 HPCAL4Q9UM19 191 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 A0A087WUV0 522 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-218ENST00000610726 GOLGA8RI6L899 631 aa7.64□□□□□ -1.19
CSDE1-218ENST00000610726 M0QYT0 321 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms