RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 NEK3P51956 506 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 USP46P62068 366 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 TCP10Q12799 353 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 ITGA9Q13797 1035 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 RASA2Q15283 850 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 PLEKHG4Q58EX7 1191 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 CCDC62Q6P9F0 684 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 IZUMO2Q6UXV1 221 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 PHLDB2Q86SQ0 1253 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 C1orf54Q8WWF1 131 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 SYNPO2Q9UMS6 1093 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 GSTTP1A0A1W2PQM5 241 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 BTBD19C9JJ37 291 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 TYROBPO43914 113 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 ATG7O95352 703 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 BCRP11274 1271 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 EEF2P13639 858 aaKnown RBP12.59□□□□□ -0.39
TP53-220ENST00000610623 VAV1P15498 845 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 CETN2P41208 172 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 HNRNPDQ14103 355 aaKnown RBP12.59□□□□□ -0.39
TP53-220ENST00000610623 ACAD11Q709F0 780 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 ANKS1BQ7Z6G8 1248 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 SPATA24Q86W54 205 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 TRIM55Q9BYV6 548 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 OSBPL8Q9BZF1 889 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 HEY2Q9UBP5 337 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 MTO1Q9Y2Z2 717 aaKnown RBP12.59□□□□□ -0.39
TP53-220ENST00000610623 NUMBLQ9Y6R0 609 aa12.59□□□□□ -0.39
TP53-220ENST00000610623 CLDN3O15551 220 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 ITGA2BP08514 1039 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 RARBP10826 455 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 ESRRAP11474 423 aaPredicted RBP12.58□□□□□ -0.4
TP53-220ENST00000610623 GZMAP12544 262 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 ANPEPP15144 967 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 KRT15P19012 456 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 MAGEA4P43358 317 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 INHBCP55103 352 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 AP2B1P63010 937 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 MAP3K10Q02779 954 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 VAC14Q08AM6 782 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 R3HDM1Q15032 1099 aaKnown RBP12.58□□□□□ -0.4
TP53-220ENST00000610623 SLC1A5Q15758 541 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 IER5LQ5T953 404 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 C6orf163Q5TEZ5 329 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 FAM91A1Q658Y4 838 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 SLFN13Q68D06 897 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 TTBK2Q6IQ55 1244 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 SH3BP5LQ7L8J4 393 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 NET1Q7Z628 596 aaPredicted RBP12.58□□□□□ -0.4
TP53-220ENST00000610623 ANKRD23Q86SG2 305 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 RTKN2Q8IZC4 609 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 CCDC89Q8N998 374 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 SYT2Q8N9I0 419 aaPredicted RBP12.58□□□□□ -0.4
TP53-220ENST00000610623 GMCL1P1Q8NEA9 526 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 PSPC1Q8WXF1 523 aaKnown RBP12.58□□□□□ -0.4
TP53-220ENST00000610623 C9orf72Q96LT7 481 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 INTS2Q9H0H0 1204 aaKnown RBP12.58□□□□□ -0.4
TP53-220ENST00000610623 ZDHHC7Q9NXF8 308 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 WASF2Q9Y6W5 498 aa12.58□□□□□ -0.4
TP53-220ENST00000610623 FOXN3O00409 490 aaPredicted RBP12.57□□□□□ -0.4
TP53-220ENST00000610623 CLIC2O15247 247 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 PPP1R11O60927 126 aaPredicted RBP12.57□□□□□ -0.4
TP53-220ENST00000610623 ZBED4O75132 1171 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 LGR5O75473 907 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 GCAP28676 217 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 PGM1P36871 562 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 RGS2P41220 211 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 CACNB3P54284 484 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 ABCB5Q2M3G0 1257 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 TRMT5Q32P41 509 aaKnown RBP12.57□□□□□ -0.4
TP53-220ENST00000610623 KLC3Q6P597 504 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 LVRNQ6Q4G3 990 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 RINLQ6ZS11 566 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 KCTD1Q719H9 257 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 MYLK4Q86YV6 388 aaPredicted RBP12.57□□□□□ -0.4
TP53-220ENST00000610623 PIP4K2CQ8TBX8 421 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 REEP2Q9BRK0 252 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 VPS33BQ9H267 617 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 NDE1Q9NXR1 346 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 TMOD2Q9NZR1 351 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 KANSL3Q9P2N6 904 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 PCDHAC2Q9Y5I4 1007 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 USP17L10C9JJH3 530 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 ATP6V1G1O75348 118 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 SLC34A2O95436 690 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 ARFIP2P53365 341 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 ARHGAP44Q17R89 818 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.57□□□□□ -0.4
TP53-220ENST00000610623 ZNF564Q8TBZ8 553 aaPredicted RBP12.57□□□□□ -0.4
TP53-220ENST00000610623 SKA1Q96BD8 255 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 GMCL1Q96IK5 515 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 DYDC2Q96IM9 177 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 GPAMQ9HCL2 828 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 CHST7Q9NS84 486 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 ETNK2Q9NVF9 386 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 PTTG2Q9NZH5 202 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 UVRAGQ9P2Y5 699 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 DNM3Q9UQ16 869 aa12.57□□□□□ -0.4
TP53-220ENST00000610623 EIF3DO15371 548 aaKnown RBP eCLIP12.56□□□□□ -0.4
TP53-220ENST00000610623 HNRNPRO43390 633 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms