RNA–Protein interactions for RNA: ENST00000610493.1

CCL16-204, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 5

Gene CCL16, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-204ENST00000610493 PCDHAC2Q9Y5I4 1007 aa9.02□□□□□ -0.96
CCL16-204ENST00000610493 SIPA1L1O43166 1804 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 A0A0U1RQG5 324 aaPredicted RBP9.02□□□□□ -0.97
CCL16-204ENST00000610493 GOLGA8KD6RF30 607 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 GCOM1H8Y6P7 765 aaPredicted RBP9.02□□□□□ -0.97
CCL16-204ENST00000610493 TULP2O00295 520 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 TGFB1I1O43294 461 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 TBCAO75347 108 aaKnown RBP9.02□□□□□ -0.97
CCL16-204ENST00000610493 POLR2MP0CAP2 368 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 MYBP10242 640 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 MYBL2P10244 700 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 FERP16591 822 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 SLC9A1P19634 815 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 SSTR4P31391 388 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 PSMC2P35998 433 aaKnown RBP9.02□□□□□ -0.97
CCL16-204ENST00000610493 GRIK1P39086 918 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 TNNT3P45378 269 aaPredicted RBP9.02□□□□□ -0.97
CCL16-204ENST00000610493 GYS2P54840 703 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 APBA1Q02410 837 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 RRP1BQ14684 758 aaKnown RBP9.02□□□□□ -0.97
CCL16-204ENST00000610493 BBS9Q3SYG4 887 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 LEKR1Q6ZMV7 388 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 STXBP4Q6ZWJ1 553 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 ZNF571Q7Z3V5 609 aaPredicted RBP9.02□□□□□ -0.97
CCL16-204ENST00000610493 SLFN11Q7Z7L1 901 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 FAM160B2Q86V87 743 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 SPACA3Q8IXA5 215 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 IFT20Q8IY31 132 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 MREGQ8N565 214 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 FAM133AQ8N9E0 248 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 C1orf131Q8NDD1 294 aaKnown RBP9.02□□□□□ -0.97
CCL16-204ENST00000610493 AFAP1L1Q8TED9 768 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 LMBR1Q8WVP7 490 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 FAM151AQ8WW52 585 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 KLHL6Q8WZ60 621 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 SLC35C1Q96A29 364 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 PRMT6Q96LA8 375 aaPredicted RBP9.02□□□□□ -0.97
CCL16-204ENST00000610493 SPAG5Q96R06 1193 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 BHMT2Q9H2M3 363 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 ZHX3Q9H4I2 956 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 SIX2Q9NPC8 291 aa9.02□□□□□ -0.97
CCL16-204ENST00000610493 MRPL11Q9Y3B7 192 aaKnown RBP9.02□□□□□ -0.97
CCL16-204ENST00000610493 ASTN1O14525 1302 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 SHTN1A0MZ66 631 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 GOLGA6BA6NDN3 693 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 MEIS1O00470 390 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 BUB1O43683 1085 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 OPA1O60313 960 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 FLOT1O75955 427 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 VIL1P09327 827 aaKnown RBP9.01□□□□□ -0.97
CCL16-204ENST00000610493 CAPN2P17655 700 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 PRELPP51888 382 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 SETQ01105 290 aaPredicted RBP9.01□□□□□ -0.97
CCL16-204ENST00000610493 GHRHRQ02643 423 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 IKQ13123 557 aaPredicted RBP9.01□□□□□ -0.97
CCL16-204ENST00000610493 PPP2R5AQ15172 486 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 USH1GQ495M9 461 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 C8orf74Q6P047 294 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 VPS36Q86VN1 386 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 FAM178BQ8IXR5 827 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 ANKRD13CQ8N6S4 541 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 ACTRT1Q8TDG2 376 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 HDAC7Q8WUI4 952 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 FIZ1Q96SL8 496 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 RIT2Q99578 217 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 STRA6Q9BX79 667 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 FAM204AQ9H8W3 233 aa9.01□□□□□ -0.97
CCL16-204ENST00000610493 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.01□□□□□ -0.97
CCL16-204ENST00000610493 FRMPD4Q14CM0 1322 aa9□□□□□ -0.97
CCL16-204ENST00000610493 H3BS24 57 aa9□□□□□ -0.97
CCL16-204ENST00000610493 NCK2O43639 380 aa9□□□□□ -0.97
CCL16-204ENST00000610493 SHOX2O60902 331 aaPredicted RBP9□□□□□ -0.97
CCL16-204ENST00000610493 GCNT3O95395 438 aa9□□□□□ -0.97
CCL16-204ENST00000610493 GJB6O95452 261 aa9□□□□□ -0.97
CCL16-204ENST00000610493 ZBTB48P10074 688 aaPredicted RBP9□□□□□ -0.97
CCL16-204ENST00000610493 STAT1P42224 750 aa9□□□□□ -0.97
CCL16-204ENST00000610493 NAP1L1P55209 391 aaKnown RBP9□□□□□ -0.97
CCL16-204ENST00000610493 PPFIA1Q13136 1202 aa9□□□□□ -0.97
CCL16-204ENST00000610493 AUHQ13825 339 aaKnown RBP9□□□□□ -0.97
CCL16-204ENST00000610493 RPS6KA1Q15418 735 aa9□□□□□ -0.97
CCL16-204ENST00000610493 EZH2Q15910 746 aaKnown RBP9□□□□□ -0.97
CCL16-204ENST00000610493 DDR2Q16832 855 aa9□□□□□ -0.97
CCL16-204ENST00000610493 NBPF9Q3BBW0 867 aa9□□□□□ -0.97
CCL16-204ENST00000610493 CEP55Q53EZ4 464 aa9□□□□□ -0.97
CCL16-204ENST00000610493 EMC10Q5UCC4 262 aa9□□□□□ -0.97
CCL16-204ENST00000610493 LRCH2Q5VUJ6 765 aa9□□□□□ -0.97
CCL16-204ENST00000610493 ALKBH5Q6P6C2 394 aaKnown RBP9□□□□□ -0.97
CCL16-204ENST00000610493 C22orf34Q6ZV56 151 aa9□□□□□ -0.97
CCL16-204ENST00000610493 NIPA1Q7RTP0 329 aa9□□□□□ -0.97
CCL16-204ENST00000610493 ZNF720Q7Z2F6 126 aa9□□□□□ -0.97
CCL16-204ENST00000610493 CD302Q8IX05 232 aa9□□□□□ -0.97
CCL16-204ENST00000610493 SAMD3Q8N6K7 520 aa9□□□□□ -0.97
CCL16-204ENST00000610493 LRRC57Q8N9N7 239 aa9□□□□□ -0.97
CCL16-204ENST00000610493 USP38Q8NB14 1042 aa9□□□□□ -0.97
CCL16-204ENST00000610493 CYP2W1Q8TAV3 490 aa9□□□□□ -0.97
CCL16-204ENST00000610493 SCFD2Q8WU76 684 aa9□□□□□ -0.97
CCL16-204ENST00000610493 HSPA12BQ96MM6 686 aa9□□□□□ -0.97
CCL16-204ENST00000610493 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9□□□□□ -0.97
CCL16-204ENST00000610493 STK33Q9BYT3 514 aa9□□□□□ -0.97
CCL16-204ENST00000610493 VPS33BQ9H267 617 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms