RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 THEM5Q8N1Q8 247 aa13.89□□□□□ -0.19
SNX20-205ENST00000610485 NOC3LQ8WTT2 800 aaKnown RBP13.89□□□□□ -0.19
SNX20-205ENST00000610485 CHAMP1Q96JM3 812 aa13.89□□□□□ -0.19
SNX20-205ENST00000610485 FAM84AQ96KN4 292 aa13.89□□□□□ -0.19
SNX20-205ENST00000610485 SPATA32Q96LK8 384 aa13.89□□□□□ -0.19
SNX20-205ENST00000610485 KXD1Q9BQD3 176 aa13.89□□□□□ -0.19
SNX20-205ENST00000610485 LRRC3Q9BY71 257 aa13.89□□□□□ -0.19
SNX20-205ENST00000610485 MTMR12Q9C0I1 747 aa13.89□□□□□ -0.19
SNX20-205ENST00000610485 ASAH2Q9NR71 780 aa13.89□□□□□ -0.19
SNX20-205ENST00000610485 ARHGEF3Q9NR81 526 aa13.89□□□□□ -0.19
SNX20-205ENST00000610485 INTS13Q9NVM9 706 aa13.89□□□□□ -0.19
SNX20-205ENST00000610485 SIX4Q9UIU6 781 aa13.89□□□□□ -0.19
SNX20-205ENST00000610485 HPSEQ9Y251 543 aa13.89□□□□□ -0.19
SNX20-205ENST00000610485 SLC27A5Q9Y2P5 690 aa13.89□□□□□ -0.19
SNX20-205ENST00000610485 ASB3Q9Y575 518 aa13.89□□□□□ -0.19
SNX20-205ENST00000610485 NOTCH4Q99466 2003 aa13.89□□□□□ -0.19
SNX20-205ENST00000610485 PTPRJQ12913 1337 aa13.89□□□□□ -0.19
SNX20-205ENST00000610485 FAM237AA0A1B0GTK4 181 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 PI15O43692 258 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 KLRC4O43908 158 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 TMEM191BP0C7N4 346 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 MYL4P12829 197 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 ALDH1A3P47895 512 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 EPHB3P54753 998 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 RBP5P82980 135 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 SMARCB1Q12824 385 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 SLC39A12Q504Y0 691 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 PHLDB3Q6NSJ2 640 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 NELFCDQ8IXH7 590 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 C12orf56Q8IXR9 622 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 PDCL2Q8N4E4 241 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 CSGALNACT2Q8N6G5 542 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 TTC9BQ8N6N2 239 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 OR5B17Q8NGF7 314 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 C2orf15Q8WU43 125 aaKnown RBP13.88□□□□□ -0.19
SNX20-205ENST00000610485 ELSPBP1Q96BH3 223 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 PAGE5Q96GU1 130 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 ANKRD36BP1Q96IX9 119 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 IRF2BPLQ9H1B7 796 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 TBC1D17Q9HA65 648 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 GDAP2Q9NXN4 497 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 USP25Q9UHP3 1055 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 L1RE1Q9UN81 338 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 MUC6Q6W4X9 2439 aa13.88□□□□□ -0.19
SNX20-205ENST00000610485 A0A1B0GVL5 298 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 SOAT2O75908 522 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 TUFMP49411 452 aaKnown RBP13.87□□□□□ -0.19
SNX20-205ENST00000610485 PFKPQ01813 784 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 BFSP1Q12934 665 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 SNRNP35Q16560 246 aaKnown RBP13.87□□□□□ -0.19
SNX20-205ENST00000610485 FAM78AQ5JUQ0 283 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 LMBRD2Q68DH5 695 aaPredicted RBP13.87□□□□□ -0.19
SNX20-205ENST00000610485 TANGO2Q6ICL3 276 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 HS2ST1Q7LGA3 356 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 LRRTM3Q86VH5 581 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 WDR49Q8IV35 697 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 CCDC105Q8IYK2 499 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 TMEM86AQ8N2M4 240 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 SHKBP1Q8TBC3 707 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 SPATA18Q8TC71 538 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 SPPL2BQ8TCT7 592 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 SMARCD2Q92925 531 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 PSMG2Q969U7 264 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 ZSWIM3Q96MP5 696 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 ASB16Q96NS5 453 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 PLA2G2FQ9BZM2 168 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 SLC39A2Q9NP94 309 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 CGNQ9P2M7 1197 aaKnown RBP13.87□□□□□ -0.19
SNX20-205ENST00000610485 ATP6V1DQ9Y5K8 247 aa13.87□□□□□ -0.19
SNX20-205ENST00000610485 MYO10Q9HD67 2058 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.86□□□□□ -0.19
SNX20-205ENST00000610485 TULP1O00294 542 aaPredicted RBP13.86□□□□□ -0.19
SNX20-205ENST00000610485 CLIC2O15247 247 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 HUS1O60921 280 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 TNNC2P02585 160 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 MYL1P05976 194 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 KRT19P08727 400 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 GJA1P17302 382 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 ATF6P18850 670 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 CYP2J2P51589 502 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 STARD6P59095 220 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 PSMD6Q15008 389 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 TEAD2Q15562 447 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 KNOP1Q1ED39 458 aaKnown RBP13.86□□□□□ -0.19
SNX20-205ENST00000610485 DUOXA2Q1HG44 320 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 LIMS2Q7Z4I7 341 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 DNAJB7Q7Z6W7 309 aaPredicted RBP13.86□□□□□ -0.19
SNX20-205ENST00000610485 ITIH5Q86UX2 942 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 DCP1BQ8IZD4 617 aaKnown RBP13.86□□□□□ -0.19
SNX20-205ENST00000610485 TOP6BLQ8N6T0 577 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 XXYLT1Q8NBI6 393 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 SEPT5Q99719 369 aaPredicted RBP13.86□□□□□ -0.19
SNX20-205ENST00000610485 ACBD6Q9BR61 282 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 DDX23Q9BUQ8 820 aaKnown RBP13.86□□□□□ -0.19
SNX20-205ENST00000610485 GPR88Q9GZN0 384 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 SCAND2PQ9GZW5 306 aaPredicted RBP13.86□□□□□ -0.19
SNX20-205ENST00000610485 TRPV4Q9HBA0 871 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 ZFP14Q9HCL3 533 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 SNX9Q9Y5X1 595 aa13.86□□□□□ -0.19
SNX20-205ENST00000610485 A0A1W2PRU2 124 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms