RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 PRPHP41219 470 aa17.15■□□□□ 0.34
HDDC2-210ENST00000609574 AARSP49588 968 aaKnown RBP eCLIP17.15■□□□□ 0.343e-8■■□□□ 12.6
HDDC2-210ENST00000609574 MCM2P49736 904 aa17.15■□□□□ 0.34
HDDC2-210ENST00000609574 MAPK7Q13164 816 aa17.15■□□□□ 0.34
HDDC2-210ENST00000609574 NBR1Q14596 966 aa17.15■□□□□ 0.34
HDDC2-210ENST00000609574 MGAT5BQ3V5L5 792 aa17.15■□□□□ 0.34
HDDC2-210ENST00000609574 STXBP5Q5T5C0 1151 aa17.15■□□□□ 0.34
HDDC2-210ENST00000609574 TXNDC11Q6PKC3 985 aa17.15■□□□□ 0.34
HDDC2-210ENST00000609574 GAB3Q8WWW8 586 aa17.15■□□□□ 0.34
HDDC2-210ENST00000609574 SENP8Q96LD8 212 aa17.15■□□□□ 0.34
HDDC2-210ENST00000609574 ZSCAN31Q96LW9 406 aaPredicted RBP17.15■□□□□ 0.34
HDDC2-210ENST00000609574 DNAJC25Q9H1X3 360 aa17.15■□□□□ 0.34
HDDC2-210ENST00000609574 CCDC163A0A0D9SF12 145 aa17.14■□□□□ 0.33
HDDC2-210ENST00000609574 CDC25AP30304 524 aa17.14■□□□□ 0.33
HDDC2-210ENST00000609574 AVPR1AP37288 418 aa17.14■□□□□ 0.33
HDDC2-210ENST00000609574 SMARCB1Q12824 385 aa17.14■□□□□ 0.33
HDDC2-210ENST00000609574 CCINQ13939 588 aa17.14■□□□□ 0.33
HDDC2-210ENST00000609574 ZBTB6Q15916 424 aa17.14■□□□□ 0.33
HDDC2-210ENST00000609574 CC2D1AQ6P1N0 951 aaPredicted RBP17.14■□□□□ 0.33
HDDC2-210ENST00000609574 GAREM2Q75VX8 874 aa17.14■□□□□ 0.33
HDDC2-210ENST00000609574 SYT2Q8N9I0 419 aaPredicted RBP17.14■□□□□ 0.33
HDDC2-210ENST00000609574 GKN1Q9NS71 199 aa17.14■□□□□ 0.33
HDDC2-210ENST00000609574 KIF3AQ9Y496 699 aa17.14■□□□□ 0.33
HDDC2-210ENST00000609574 PCDHGA5Q9Y5G8 931 aa17.14■□□□□ 0.33
HDDC2-210ENST00000609574 CHD8Q9HCK8 2581 aa17.14■□□□□ 0.33
HDDC2-210ENST00000609574 PP2D1A8MPX8 630 aa17.13■□□□□ 0.33
HDDC2-210ENST00000609574 HNRNPDLO14979 420 aaKnown RBP17.13■□□□□ 0.33
HDDC2-210ENST00000609574 OGTO15294 1046 aa17.13■□□□□ 0.33
HDDC2-210ENST00000609574 MEFVO15553 781 aaPredicted RBP17.13■□□□□ 0.33
HDDC2-210ENST00000609574 AKAP3O75969 853 aa17.13■□□□□ 0.33
HDDC2-210ENST00000609574 VNN2O95498 520 aa17.13■□□□□ 0.33
HDDC2-210ENST00000609574 ABCD1P33897 745 aa17.13■□□□□ 0.33
HDDC2-210ENST00000609574 LILRA4P59901 499 aa17.13■□□□□ 0.33
HDDC2-210ENST00000609574 BFSP1Q12934 665 aa17.13■□□□□ 0.33
HDDC2-210ENST00000609574 SLC39A12Q504Y0 691 aa17.13■□□□□ 0.33
HDDC2-210ENST00000609574 CAMKK1Q8N5S9 505 aa17.13■□□□□ 0.33
HDDC2-210ENST00000609574 C2orf15Q8WU43 125 aaKnown RBP17.13■□□□□ 0.33
HDDC2-210ENST00000609574 CRISPLD1Q9H336 500 aa17.13■□□□□ 0.33
HDDC2-210ENST00000609574 PCDHB6Q9Y5E3 794 aa17.13■□□□□ 0.33
HDDC2-210ENST00000609574 KMT2BQ9UMN6 2715 aaPredicted RBP17.12■□□□□ 0.33
HDDC2-210ENST00000609574 EXTL3O43909 919 aa17.12■□□□□ 0.33
HDDC2-210ENST00000609574 EPN2O95208 641 aa17.12■□□□□ 0.33
HDDC2-210ENST00000609574 PLA2G4BP0C869 781 aa17.12■□□□□ 0.33
HDDC2-210ENST00000609574 DDX6P26196 483 aaKnown RBP eCLIP17.12■□□□□ 0.335e-8■■■□□ 16
HDDC2-210ENST00000609574 U2AF2P26368 475 aaKnown RBP eCLIP17.12■□□□□ 0.331e-6■□□□□ 9.6
HDDC2-210ENST00000609574 CYP4F8P98187 520 aa17.12■□□□□ 0.33
HDDC2-210ENST00000609574 TNK2Q07912 1038 aa17.12■□□□□ 0.33
HDDC2-210ENST00000609574 SF3A2Q15428 464 aaKnown RBP17.12■□□□□ 0.33
HDDC2-210ENST00000609574 N4BP2L1Q5TBK1 243 aaPredicted RBP17.12■□□□□ 0.33
HDDC2-210ENST00000609574 STPG1Q5TH74 334 aa17.12■□□□□ 0.33
HDDC2-210ENST00000609574 SPATA1Q5VX52 437 aa17.12■□□□□ 0.33
HDDC2-210ENST00000609574 LRRC3BQ96PB8 259 aa17.12■□□□□ 0.33
HDDC2-210ENST00000609574 MSTO1Q9BUK6 570 aa17.12■□□□□ 0.33
HDDC2-210ENST00000609574 SH2B1Q9NRF2 756 aaPredicted RBP17.12■□□□□ 0.33
HDDC2-210ENST00000609574 NCANO14594 1321 aa17.12■□□□□ 0.33
HDDC2-210ENST00000609574 SOAT2O75908 522 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 RHOBTB1O94844 696 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 KRT18P05783 430 aaKnown RBP17.11■□□□□ 0.33
HDDC2-210ENST00000609574 NEFLP07196 543 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 TNFSF9P41273 254 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 PXNP49023 591 aaPredicted RBP17.11■□□□□ 0.33
HDDC2-210ENST00000609574 GUCY2FP51841 1108 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 RUNX3Q13761 415 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 TMEM132DQ14C87 1099 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 ELF2Q15723 593 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 ENOX2Q16206 610 aaKnown RBP17.11■□□□□ 0.33
HDDC2-210ENST00000609574 MCTP1Q6DN14 999 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 KCNK18Q7Z418 384 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 KBTBD6Q86V97 674 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 DCP1BQ8IZD4 617 aaKnown RBP17.11■□□□□ 0.33
HDDC2-210ENST00000609574 CMTM8Q8IZV2 173 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 MYCT1Q8N699 235 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 GIPC2Q8TF65 315 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 PLIN2Q99541 437 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 LPIN3Q9BQK8 851 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 MKNK1Q9BUB5 465 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 KIF9Q9HAQ2 790 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 VPS45Q9NRW7 570 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 TBX20Q9UMR3 447 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 DERAQ9Y315 318 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 TICRRQ7Z2Z1 1910 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 TRIP11Q15643 1979 aa17.11■□□□□ 0.33
HDDC2-210ENST00000609574 CYB561D2O14569 222 aa17.1■□□□□ 0.33
HDDC2-210ENST00000609574 FAM13AO94988 1023 aa17.1■□□□□ 0.33
HDDC2-210ENST00000609574 DRD1P21728 446 aa17.1■□□□□ 0.33
HDDC2-210ENST00000609574 RAP1GAPP47736 663 aa17.1■□□□□ 0.33
HDDC2-210ENST00000609574 TOB1P50616 345 aaPredicted RBP17.1■□□□□ 0.33
HDDC2-210ENST00000609574 NCKAP1LP55160 1127 aa17.1■□□□□ 0.33
HDDC2-210ENST00000609574 ST3GAL1Q11201 340 aa17.1■□□□□ 0.33
HDDC2-210ENST00000609574 CCDC6Q16204 474 aa17.1■□□□□ 0.33
HDDC2-210ENST00000609574 FBXO43Q4G163 708 aa17.1■□□□□ 0.33
HDDC2-210ENST00000609574 RILPL1Q5EBL4 403 aa17.1■□□□□ 0.33
HDDC2-210ENST00000609574 TMEM196Q5HYL7 178 aa17.1■□□□□ 0.33
HDDC2-210ENST00000609574 C9orf57Q5W0N0 161 aa17.1■□□□□ 0.33
HDDC2-210ENST00000609574 CCDC26Q8TAB7 109 aa17.1■□□□□ 0.33
HDDC2-210ENST00000609574 SPPL2BQ8TCT7 592 aa17.1■□□□□ 0.33
HDDC2-210ENST00000609574 MRPS31Q92665 395 aaKnown RBP17.1■□□□□ 0.33
HDDC2-210ENST00000609574 SLC46A2Q9BY10 475 aa17.1■□□□□ 0.33
HDDC2-210ENST00000609574 ZCWPW1Q9H0M4 648 aa17.1■□□□□ 0.33
HDDC2-210ENST00000609574 ODF2LQ9ULJ1 636 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms