RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 MFAP3P55082 362 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 PSMC1P62191 440 aaKnown RBP10.42□□□□□ -0.74
CTCFL-222ENST00000609232 CKAP4Q07065 602 aaKnown RBP10.42□□□□□ -0.74
CTCFL-222ENST00000609232 MICALCLQ6ZW33 695 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 IRF2BP2Q7Z5L9 587 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 ABRAQ8N0Z2 381 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 MSL3Q8N5Y2 521 aaKnown RBP10.42□□□□□ -0.74
CTCFL-222ENST00000609232 KIF12Q96FN5 646 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 KLF6Q99612 283 aaPredicted RBP10.42□□□□□ -0.74
CTCFL-222ENST00000609232 TMEM8AQ9HCN3 771 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 RBBP6Q7Z6E9 1792 aaKnown RBP10.42□□□□□ -0.74
CTCFL-222ENST00000609232 SLC15A5A6NIM6 579 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 LDHAP00338 332 aaKnown RBP10.42□□□□□ -0.74
CTCFL-222ENST00000609232 ZSCAN5DPP0CG00 497 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 GRB14Q14449 540 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 DGKDQ16760 1214 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 LNX1Q8TBB1 728 aaPredicted RBP10.42□□□□□ -0.74
CTCFL-222ENST00000609232 ZNF564Q8TBZ8 553 aaPredicted RBP10.42□□□□□ -0.74
CTCFL-222ENST00000609232 LPPQ93052 612 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 C9orf72Q96LT7 481 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 MCEEQ96PE7 176 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 AGPAT1Q99943 283 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.42□□□□□ -0.74
CTCFL-222ENST00000609232 GOLGA8RI6L899 631 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 OPA1O60313 960 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 SLC4A1P02730 911 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 FLT3P36888 993 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 RPL7AP62424 266 aaKnown RBP10.42□□□□□ -0.74
CTCFL-222ENST00000609232 MAP2K5Q13163 448 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 ZNF699Q32M78 642 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 MDM1Q8TC05 714 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 ARL8AQ96BM9 186 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 AP5M1Q9H0R1 490 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 C2orf40Q9H1Z8 148 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 CXCL16Q9H2A7 254 aa10.42□□□□□ -0.74
CTCFL-222ENST00000609232 LGR5O75473 907 aa10.41□□□□□ -0.74
CTCFL-222ENST00000609232 LCP1P13796 627 aa10.41□□□□□ -0.74
CTCFL-222ENST00000609232 NOP14P78316 857 aaKnown RBP10.41□□□□□ -0.74
CTCFL-222ENST00000609232 GUCY1A3Q02108 690 aa10.41□□□□□ -0.74
CTCFL-222ENST00000609232 NME8Q8N427 588 aa10.41□□□□□ -0.74
CTCFL-222ENST00000609232 RNPC3Q96LT9 517 aaKnown RBP10.41□□□□□ -0.74
CTCFL-222ENST00000609232 PCDHB18PQ96TA0 734 aa10.41□□□□□ -0.74
CTCFL-222ENST00000609232 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.41□□□□□ -0.74
CTCFL-222ENST00000609232 ATXN8OSP0DMR3 200 aa10.41□□□□□ -0.74
CTCFL-222ENST00000609232 ETS1P14921 441 aa10.41□□□□□ -0.74
CTCFL-222ENST00000609232 TCF4P15884 667 aa10.41□□□□□ -0.74
CTCFL-222ENST00000609232 SEC24CP53992 1094 aa10.41□□□□□ -0.74
CTCFL-222ENST00000609232 DUSP28Q4G0W2 176 aa10.41□□□□□ -0.74
CTCFL-222ENST00000609232 WDR93Q6P2C0 686 aa10.41□□□□□ -0.74
CTCFL-222ENST00000609232 GDAP1Q8TB36 358 aa10.41□□□□□ -0.74
CTCFL-222ENST00000609232 N4BP2L2Q92802 583 aaPredicted RBP10.41□□□□□ -0.74
CTCFL-222ENST00000609232 F5P12259 2224 aa10.41□□□□□ -0.74
CTCFL-222ENST00000609232 PTPRJQ12913 1337 aa10.41□□□□□ -0.74
CTCFL-222ENST00000609232 TLR3O15455 904 aaKnown RBP10.4□□□□□ -0.74
CTCFL-222ENST00000609232 P4HA2O15460 535 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 GAS2O43903 313 aaKnown RBP10.4□□□□□ -0.74
CTCFL-222ENST00000609232 BANF1O75531 89 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 TOM1L1O75674 476 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 PAX7P23759 505 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 POLR2BP30876 1174 aaKnown RBP10.4□□□□□ -0.74
CTCFL-222ENST00000609232 ZNF484Q5JVG2 852 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 C1orf220Q5T0J3 134 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 SEL1L2Q5TEA6 688 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 ATF7IP2Q5U623 682 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 ACOT1Q86TX2 421 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 IFNL1Q8IU54 200 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 FMNL3Q8IVF7 1028 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 PPTC7Q8NI37 304 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 TMC2Q8TDI7 906 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 RNF34Q969K3 372 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 ZFP42Q96MM3 310 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 SNTG2Q9NY99 539 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 GSCP56915 257 aaPredicted RBP10.4□□□□□ -0.74
CTCFL-222ENST00000609232 IQSEC1Q6DN90 963 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 CASC4Q6P4E1 433 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 C1orf228Q6PIY5 440 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 ANKMY2Q8IV38 441 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 KREMEN1Q96MU8 473 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 CD248Q9HCU0 757 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 CPSF2Q9P2I0 782 aaKnown RBP10.4□□□□□ -0.74
CTCFL-222ENST00000609232 EIF3HO15372 352 aaKnown RBP eCLIP10.4□□□□□ -0.74
CTCFL-222ENST00000609232 MAGEB2O15479 319 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 PBX3P40426 434 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 AARSP49588 968 aaKnown RBP eCLIP10.4□□□□□ -0.74
CTCFL-222ENST00000609232 CRHR2Q13324 411 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 GRIK4Q16099 956 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 SGO2Q562F6 1265 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 ALG3Q92685 438 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 ATXN7L3BQ96GX2 97 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 MFSD14AQ96MC6 490 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 MED10Q9BTT4 135 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 RPF1Q9H9Y2 349 aaKnown RBP10.4□□□□□ -0.74
CTCFL-222ENST00000609232 CDHR5Q9HBB8 845 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 NUB1Q9Y5A7 615 aa10.4□□□□□ -0.74
CTCFL-222ENST00000609232 GOLGA6L10A0A0M3HER8 536 aa10.39□□□□□ -0.75
CTCFL-222ENST00000609232 EDN1P05305 212 aa10.39□□□□□ -0.75
CTCFL-222ENST00000609232 RGS2P41220 211 aa10.39□□□□□ -0.75
CTCFL-222ENST00000609232 TNNC1P63316 161 aa10.39□□□□□ -0.75
CTCFL-222ENST00000609232 SREBF2Q12772 1141 aa10.39□□□□□ -0.75
CTCFL-222ENST00000609232 NME3Q13232 169 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms