RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 TAF1DQ9H5J8 278 aaPredicted RBP4.97□□□□□ -1.61
HDDC2-208ENST00000609021 POLE3Q9NRF9 147 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 UVRAGQ9P2Y5 699 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 VPS51Q9UID3 782 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 RNF112Q9ULX5 631 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 MRPS7Q9Y2R9 242 aaKnown RBP4.97□□□□□ -1.61
HDDC2-208ENST00000609021 POLR3AO14802 1390 aaPredicted RBP4.97□□□□□ -1.61
HDDC2-208ENST00000609021 PRSS44E7EML9 344 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 ADAM23O75077 832 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 TCEA3O75764 348 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 ZMYND10O75800 440 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 WFS1O76024 890 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 PIGNO95427 931 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 IFNA16P05015 189 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 GLAP06280 429 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 S100A9P06702 114 aaKnown RBP4.97□□□□□ -1.61
HDDC2-208ENST00000609021 EPB42P16452 691 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 SLC26A3P40879 764 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 NKX2-5P52952 324 aaPredicted RBP4.97□□□□□ -1.61
HDDC2-208ENST00000609021 SLC12A2P55011 1212 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 STX17P56962 302 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 KCNJ2P63252 427 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 LGALS3BPQ08380 585 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 SF3A3Q12874 501 aaKnown RBP eCLIP4.97□□□□□ -1.61
HDDC2-208ENST00000609021 VEPH1Q14D04 833 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 TSC22D1Q15714 1073 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 HAUS3Q68CZ6 603 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 ARMCX5Q6P1M9 558 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 C16orf54Q6UWD8 224 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 TPTE2Q6XPS3 522 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 IDO2Q6ZQW0 420 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 RALYLQ86SE5 291 aaKnown RBP4.97□□□□□ -1.61
HDDC2-208ENST00000609021 ARRDC4Q8NCT1 418 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 GAB3Q8WWW8 586 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 TTC17Q96AE7 1141 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 CDCA5Q96FF9 252 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 USB1Q9BQ65 265 aaKnown RBP4.97□□□□□ -1.61
HDDC2-208ENST00000609021 C17orf80Q9BSJ5 609 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 TRIM55Q9BYV6 548 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 TMEM60Q9H2L4 133 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 DENND2DQ9H6A0 471 aaPredicted RBP4.97□□□□□ -1.61
HDDC2-208ENST00000609021 DCLRE1BQ9H816 532 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 ACAD9Q9H845 621 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 POLD4Q9HCU8 107 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 LUZP4Q9P127 313 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 TXNDC16Q9P2K2 825 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 TRIM33Q9UPN9 1127 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 MAPRE3Q9UPY8 281 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 SCN11AQ9UI33 1791 aa4.97□□□□□ -1.61
HDDC2-208ENST00000609021 A0A0G2JPF8 293 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 HNRNPCL3B7ZW38 293 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 K7ENM7 598 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 CACNB4O00305 520 aaPredicted RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 BTN3A1O00481 513 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 ARHGAP33O14559 1287 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 RIPK2O43353 540 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 NIPSNAP2O75323 286 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 LRRN2O75325 713 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 LYNP07948 512 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 PABPC4LP0CB38 370 aaKnown RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 HNRNPCL4P0DMR1 293 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 VCLP18206 1134 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 CTNNA2P26232 953 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 GPD2P43304 727 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 ADCY7P51828 1080 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 CASP5P51878 434 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 RTP1P59025 263 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 PHC1P78364 1004 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 PRAMEP78395 509 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 FANCCQ00597 558 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 ATP1A4Q13733 1029 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 LRRC41Q15345 812 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 TIGD2Q4W5G0 525 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 FAM209BQ5JX69 171 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 ZNF658Q5TYW1 1059 aaPredicted RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 SHEQ5VZ18 495 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 MIGA2Q7L4E1 593 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 PROM2Q8N271 834 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 KIF2BQ8N4N8 673 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 TERB1Q8NA31 727 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 PSD4Q8NDX1 1056 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 IPMKQ8NFU5 416 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 FBXO30Q8TB52 745 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 HCAR2Q8TDS4 363 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 ASZ1Q8WWH4 475 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 HPS1Q92902 700 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 AZIN2Q96A70 460 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 FERMT2Q96AC1 680 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 LLPHQ9BRT6 129 aaKnown RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 C9orf16Q9BUW7 83 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 KIFC3Q9BVG8 833 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 ARNT2Q9HBZ2 717 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 OLFML3Q9NRN5 406 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 DDX28Q9NUL7 540 aaKnown RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 FAM105AQ9NUU6 356 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 GGA3Q9NZ52 723 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 UBA2Q9UBT2 640 aaPredicted RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 TAGLN3Q9UI15 199 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 MED16Q9Y2X0 877 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 PCDHGA11Q9Y5H2 935 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms