RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 IKZF4Q9H2S9 585 aa14.43□□□□□ -0.1
CTSA-213ENST00000606782 CRISPLD1Q9H336 500 aa14.43□□□□□ -0.1
CTSA-213ENST00000606782 EXOC7Q9UPT5 735 aa14.43□□□□□ -0.1
CTSA-213ENST00000606782 YIPF1Q9Y548 306 aa14.43□□□□□ -0.1
CTSA-213ENST00000606782 PCDHB13Q9Y5F0 798 aa14.43□□□□□ -0.1
CTSA-213ENST00000606782 KANSL1LA0AUZ9 987 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 MYL1P05976 194 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 OR4Q2P0C623 313 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 ODC1P11926 461 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 GLULP15104 373 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 GARTP22102 1010 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 DUSP4Q13115 394 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 PLD1Q13393 1074 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 FAM78AQ5JUQ0 283 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 EFCAB13Q8IY85 973 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 GRAMD1CQ8IYS0 662 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 HS6ST3Q8IZP7 471 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 GPR88Q9GZN0 384 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 DNAJC25Q9H1X3 360 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 ZFP14Q9HCL3 533 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 TRPV5Q9NQA5 729 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 ASAH2Q9NR71 780 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 DPP3Q9NY33 737 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 DSEQ9UL01 958 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 ASB3Q9Y575 518 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 SPTBN4Q9H254 2564 aa14.42□□□□□ -0.1
CTSA-213ENST00000606782 PVALEFA0A1B0GWK0 134 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 MTMR11A4FU01 709 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 PRR23AA6NEV1 266 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 SHISA7A6NL88 538 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 LDHAP00338 332 aaKnown RBP14.41□□□□□ -0.1
CTSA-213ENST00000606782 DCNP07585 359 aaKnown RBP14.41□□□□□ -0.1
CTSA-213ENST00000606782 RFX1P22670 979 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 CASP1P29466 404 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 TAF6P49848 677 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 CASP5P51878 434 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 SMARCB1Q12824 385 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 CUL4BQ13620 913 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 ARMCX5Q6P1M9 558 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 ASCL5Q7RTU5 278 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 TMC8Q8IU68 726 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 BRSK2Q8IWQ3 736 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 OR10T2Q8NGX3 314 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 SHKBP1Q8TBC3 707 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 DNASE1L2Q92874 299 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 SMARCD2Q92925 531 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 CCDC34Q96HJ3 373 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 ZSWIM3Q96MP5 696 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 NELL2Q99435 816 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 FOXQ1Q9C009 403 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 ZCWPW1Q9H0M4 648 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 SEMA4AQ9H3S1 761 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 PANK4Q9NVE7 773 aa14.41□□□□□ -0.1
CTSA-213ENST00000606782 KLRC4O43908 158 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 KINO60870 393 aaKnown RBP14.4□□□□□ -0.1
CTSA-213ENST00000606782 GCNT3O95395 438 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 IDEP14735 1019 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 MAGEA9P43362 315 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 EPHB3P54753 998 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 DPYDQ12882 1025 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 FRMD5Q7Z6J6 570 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 C1orf210Q8IVY1 113 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 ATAD1Q8NBU5 361 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 CXorf38Q8TB03 319 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 PSMG2Q969U7 264 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 E2F7Q96AV8 911 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 CLDN23Q96B33 292 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 PGLYRP2Q96PD5 576 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 TMEM209Q96SK2 561 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 FGFBP2Q9BYJ0 223 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 BLZF1Q9H2G9 400 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 TMEM206Q9H813 350 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 TBC1D7Q9P0N9 293 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 MYO15AQ9UKN7 3530 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 TSC2P49815 1807 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 ZNF292O60281 2723 aa14.4□□□□□ -0.1
CTSA-213ENST00000606782 KPNA7A9QM74 516 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 CYB561D2O14569 222 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 KIAA0391O15091 583 aaKnown RBP14.39□□□□□ -0.11
CTSA-213ENST00000606782 EXTL3O43909 919 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 MBD3O95983 291 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 PRR29P0C7W0 189 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 MYL4P12829 197 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 PSMC3P17980 439 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 PTMSP20962 102 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 WEE1P30291 646 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 PNPLA4P41247 253 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 ALDH1A3P47895 512 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 TUFMP49411 452 aaKnown RBP14.39□□□□□ -0.11
CTSA-213ENST00000606782 MLLT6P55198 1093 aaPredicted RBP14.39□□□□□ -0.11
CTSA-213ENST00000606782 WNT7BP56706 349 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 EHHADHQ08426 723 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 UNC13DQ70J99 1090 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 DNAJB7Q7Z6W7 309 aaPredicted RBP14.39□□□□□ -0.11
CTSA-213ENST00000606782 CCDC65Q8IXS2 484 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 ZNF687Q8N1G0 1237 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 ZSWIM2Q8NEG5 633 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 SPATA20Q8TB22 786 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 C2orf15Q8WU43 125 aaKnown RBP14.39□□□□□ -0.11
CTSA-213ENST00000606782 DEPDC1BQ8WUY9 529 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms