RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 OTOL1A6NHN0 477 aaPredicted RBP12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 OR6C75A6NL08 312 aa12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 CCDC169A6NNP5 214 aa12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 M0QZQ0 153 aa12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 TRDMT1O14717 391 aaKnown RBP12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 KHNYNO15037 678 aaKnown RBP12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 HYAL3O43820 417 aaPredicted RBP12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 APBB3O95704 486 aa12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 GPR17Q13304 367 aa12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 UAP1L1Q3KQV9 507 aa12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 NAIF1Q69YI7 327 aaPredicted RBP12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 TRIM68Q6AZZ1 485 aa12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 USP37Q86T82 979 aa12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 ITIH5Q86UX2 942 aa12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 DEFB124Q8NES8 71 aa12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 ERMNQ8TAM6 284 aa12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 WASF1Q92558 559 aa12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 GCNAQ96QF7 691 aa12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 FAM83CQ9BQN1 747 aa12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 OXCT2Q9BYC2 517 aaPredicted RBP12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 EBF3Q9H4W6 596 aa12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 FBRSL1Q9HCM7 1045 aaKnown RBP12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 HPS4Q9NQG7 708 aa12.83□□□□□ -0.36
PDLIM1P1-201ENST00000604187 LAMA5O15230 3695 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 MTMR11A4FU01 709 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 PATE3B3GLJ2 98 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 ABLIM1O14639 778 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 REC8O95072 547 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 LARGE1O95461 756 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 PROZP22891 400 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 U2AF2P26368 475 aaKnown RBP eCLIP12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 WEE1P30291 646 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 NPTX2P47972 431 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 PEX3P56589 373 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 RUNX3Q13761 415 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 SEZ6Q53EL9 994 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 MPZL3Q6UWV2 235 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 RPLP0P6Q8NHW5 317 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 SEPT5Q99719 369 aaPredicted RBP12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 LPIN3Q9BQK8 851 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 BHMT2Q9H2M3 363 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 PDRG1Q9NUG6 133 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 ANKFY1Q9P2R3 1169 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 CCL26Q9Y258 94 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 INVSQ9Y283 1065 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 NEUROG3Q9Y4Z2 214 aa12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 HELZ2Q9BYK8 2649 aaKnown RBP12.82□□□□□ -0.36
PDLIM1P1-201ENST00000604187 BTBD18B2RXH4 712 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 CDX4O14627 284 aaPredicted RBP12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 CTDNEP1O95476 244 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 ARSAP15289 507 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 RPA1P27694 616 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 CDC25CP30307 473 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 MCM7P33993 719 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 CDR1P51861 262 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 SPAG1Q07617 926 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 DMC1Q14565 340 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 VEPH1Q14D04 833 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 SLC10A6Q3KNW5 377 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 PMS2CLQ68D20 193 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 OVOS1Q6IE37 1185 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 DSTYKQ6XUX3 929 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 SYT13Q7L8C5 426 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 TAS1R3Q7RTX0 852 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 CYP2U1Q7Z449 544 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 DIS3L2Q8IYB7 885 aaKnown RBP12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 ACDQ96AP0 544 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 P2RY13Q9BPV8 354 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 SLC46A2Q9BY10 475 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 IL21Q9HBE4 155 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 ASH1LQ9NR48 2969 aaKnown RBP12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 EBF1Q9UH73 591 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 KLK13Q9UKR3 277 aa12.81□□□□□ -0.36
PDLIM1P1-201ENST00000604187 TAF4O00268 1085 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 PFKFB2O60825 505 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 CXCL8P10145 99 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 FDPSP14324 419 aaKnown RBP12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 ATF6P18850 670 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 DRD1P21728 446 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 AVPR1AP37288 418 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 AARSP49588 968 aaKnown RBP eCLIP12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 GALK1P51570 392 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 DGKEP52429 567 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 FOSBP53539 338 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 AMPD2Q01433 879 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 BFSP1Q12934 665 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 DMP1Q13316 513 aaPredicted RBP12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 MYBPC2Q14324 1141 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 FBXO43Q4G163 708 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 HAUS3Q68CZ6 603 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 CMTM8Q8IZV2 173 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 TSTD1Q8NFU3 115 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 TPSD1Q9BZJ3 242 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 TM6SF1Q9BZW5 370 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 TMEM134Q9H6X4 195 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 ARHGAP28Q9P2N2 729 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 MAST4O15021 2626 aa12.8□□□□□ -0.36
PDLIM1P1-201ENST00000604187 SPAARA0A1B0GVQ0 90 aa12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 BCKDHBP21953 392 aa12.79□□□□□ -0.36
PDLIM1P1-201ENST00000604187 NMT1P30419 496 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms